Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
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Accession | NC_007519 |
Length | 3,730,232 |
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The map label for this gene is 78355666
Identifier: 78355666
GI number: 78355666
Start: 639224
End: 639472
Strand: Direct
Name: 78355666
Synonym: Dde_0619
Alternate gene names: NA
Gene position: 639224-639472 (Clockwise)
Preceding gene: 78355663
Following gene: 78355667
Centisome position: 17.14
GC content: 42.17
Gene sequence:
>249_bases ATGGAACAAGAAAAACTATTAACGGTTCGCGATGTTGCAACTCTTTTGTCATGCTCTGAAAGCCTTGTGCGTCGAGCAGA TATGAAACAAGCGCTTGGTGCGGTACGCATCGGTAAGCGCGGAGTACGATTCAAACGAGAGTTGATTGAAGCATATCTTC AATCACAAAGAACGGATTCGACAGAATGTAAATCTGAGAAAAAAGTACATAAAAAGAGCATGTTGACTTCAAAACACGGA CTCTGGTAG
Upstream 100 bases:
>100_bases ATCGCTTTTTTAAAGTGATTTATATTTATGTATTTTCCTTGTTTGGGGGCCGCAGGGGCACGCCAAGGCGGGGAGGTACA TAAACGGCTAAGGCTGCTTT
Downstream 100 bases:
>100_bases TCTGATTATGTAAGCAGCCTTCAGATAGGATAAATTATGCCATATCATGAAGGAAAAAAATGGCGAGGCGTTGTGCGGTT CGTACTGACTGACGGACAAT
Product: excisionase/Xis
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MEQEKLLTVRDVATLLSCSESLVRRADMKQALGAVRIGKRGVRFKRELIEAYLQSQRTDSTECKSEKKVHKKSMLTSKHG LW
Sequences:
>Translated_82_residues MEQEKLLTVRDVATLLSCSESLVRRADMKQALGAVRIGKRGVRFKRELIEAYLQSQRTDSTECKSEKKVHKKSMLTSKHG LW >Mature_82_residues MEQEKLLTVRDVATLLSCSESLVRRADMKQALGAVRIGKRGVRFKRELIEAYLQSQRTDSTECKSEKKVHKKSMLTSKHG LW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9420; Mature: 9420
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQEKLLTVRDVATLLSCSESLVRRADMKQALGAVRIGKRGVRFKRELIEAYLQSQRTDS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TECKSEKKVHKKSMLTSKHGLW HHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEQEKLLTVRDVATLLSCSESLVRRADMKQALGAVRIGKRGVRFKRELIEAYLQSQRTDS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TECKSEKKVHKKSMLTSKHGLW HHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA