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The map label for this gene is yejA [H]

Identifier: 78355495

GI number: 78355495

Start: 456194

End: 458080

Strand: Direct

Name: yejA [H]

Synonym: Dde_0448

Alternate gene names: 78355495

Gene position: 456194-458080 (Clockwise)

Preceding gene: 78355494

Following gene: 78355496

Centisome position: 12.23

GC content: 60.25

Gene sequence:

>1887_bases
ATGCAGTACGCATTGAGACGGCGGAAAGGCGTGAATATGCTGGCTGTAGTGAGCGGTACGGCGGCAAGGGTATGCATGAT
GGCTGTGTGCGCGTTGTGGCTGATGCAGGCCGGTGCGGCAGCGGCGCAGCCGCTTACGGTGCTGACCATGGACGGCGAAC
CGCGTTTTGCATGGAATGGCCGTCACTTTCCCCATGCCGACCCGGACGCGCCCAAAGGCGGCACACTGCGTCTTTCGGCC
AGAGGCAATTTCGACTCCATGCATGCCTTCATCGCACGGGGACTGCCCGCGGCGGGCATAGGGCTTACCGTGGAGACGCT
GGGCACGGGAGCACCTGATAATACCCTGTTTGAATATTACGGGCTTATCGCGCAGTCATTTGAGGTTGCACCGGATTTTT
CGCATGTGACGTTCAACATCAATCCCGCGGCGCGTTTTCATGACGGCAGGCCCGTCACCGCGCACGACGTGGCCGTCACC
TTCCGCCTGCTGATGGAGCACGGCGCTCCCCGCTACAAGCAGTATTATGCCGCGGTGGACAGAGCCGAAGAACTGTCGCC
CCTGAGCGTGCGGTTTTATCTGAAGGAAAAAAACAACAAGGAGCTGCCAGTCATACTGGCCCAGCTGCCGGTGCTGCCGG
CGCACTACTGGCAGAATCATGATTTTTCGCAACCTTCGCTTGTGCCGGCCGTCGGCAGCGGGCCTTATCGGGTGAAGGAT
TTCGCCATGGGCAGTTACGTGGAGTACGAGCTTGTGGACGATTACTGGGCGCGCGACCTGCCCGTGAACAAGGGGCGTTA
TAATTTCGGCACCATCCGGTACGAATACTACCGTGACGAGACCGTGGCCAGAGAGGCGTTCAAAGCGGGAGAATTTGATC
TGTACCCCGAGGGCACGGCCAAGGCATGGGTTTCTGCCTATACGGGACCGGCGGTTGCGGCGGGGCATATCAGACGTGAA
GAGCTGACCACCAACAGGCCCATGGGCATGTACGGTTTCTTTTTCAATACCCGCAAAGATTTGTTTCAGGACAGACGCGT
CCGTCAGGCGCTGGCCCTGCTTTTTGACTTCGAATGGACAAATAAGGCCATTTTCCACGGATCCTATACCCGCAGCACCA
GCTTTTTCGCCAACAGCGAACTTGCCAGTTCCGGTAAGCCTTCTCAGGCGGAACTGGATGTGCTGCGGCCTTTTGCCGGA
CAGCTGCCGCCGGAAGTGCTGACCTCTGCCTGGGATGTTCCCCGTACGGCGGGCGACGGTAACATCCGTCCCCAGATGCG
TCAGGCGCTGGCCCTGCTGCAGCAGGCCGGCTGGACGCTGCAGGACGGCCGTCTGCGCGATGCTGCCGGCAGGCCGTTTG
AGTTCACCCTGCTGTTGCAGTCGGCGGGTTCCACCCGCGTGGTGCTGCCGTACCGCCGCAATCTGGAACGGCTGGGAATA
ATCATGAATGTGGCCATGTCAGACCCCACACAGTACGTCAACCGTGTGCGCTCTTTCGACTATGACATGATCATGGGCCG
TGTGCCGCAGTCTGCCTCGCCCGGCAACGAACAGCGGTCCTACTGGACATCAGCGTCGGCCGGTACACCCGGATCGCGCA
ATTATGCCGGTGTGCGGTCTGCGGTGGTGGATGCTCTTGTGGAGCGGCTCATCGCTTCTCCGGACAGAGACTCGCTGGTG
GTCAACTGCCGCGCGCTGGACAGGGTGCTGCTGTGGGGCGCCTATGTCATTCCCGGATGGTATTCGTCCTCTGTGCGCAT
TGCTTACTGGGACAAGTTCGGGCGCAGCGAAACGCCACCCGCCACAGGTTTTGACGTGCATTCGTGGTGGGTGGACAAAG
AGGCGGAAAAAGCGCTGCGCAATGCCGGAACAGGATACGGGAACTGA

Upstream 100 bases:

>100_bases
CCCGGCGGCGTGCCGCCGGGTGCTGCCTGTCCTTTCCGGCTGGGGCGTGTACGGGCGCCGCAACCGGATGATGTTGTTTT
GCAAGGTAAGGAGAATAGCA

Downstream 100 bases:

>100_bases
CCATGGCCGCGTATATCCTGCGCAGACTGGCACTGCTTGTGCCTACGTTTTTCGGAATAATCGCCCTGAATTTCTTTGTC
ATCCAGTCGGCACCGGGCGG

Product: ABC transporter periplasmic substrate-binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 628; Mature: 628

Protein sequence:

>628_residues
MQYALRRRKGVNMLAVVSGTAARVCMMAVCALWLMQAGAAAAQPLTVLTMDGEPRFAWNGRHFPHADPDAPKGGTLRLSA
RGNFDSMHAFIARGLPAAGIGLTVETLGTGAPDNTLFEYYGLIAQSFEVAPDFSHVTFNINPAARFHDGRPVTAHDVAVT
FRLLMEHGAPRYKQYYAAVDRAEELSPLSVRFYLKEKNNKELPVILAQLPVLPAHYWQNHDFSQPSLVPAVGSGPYRVKD
FAMGSYVEYELVDDYWARDLPVNKGRYNFGTIRYEYYRDETVAREAFKAGEFDLYPEGTAKAWVSAYTGPAVAAGHIRRE
ELTTNRPMGMYGFFFNTRKDLFQDRRVRQALALLFDFEWTNKAIFHGSYTRSTSFFANSELASSGKPSQAELDVLRPFAG
QLPPEVLTSAWDVPRTAGDGNIRPQMRQALALLQQAGWTLQDGRLRDAAGRPFEFTLLLQSAGSTRVVLPYRRNLERLGI
IMNVAMSDPTQYVNRVRSFDYDMIMGRVPQSASPGNEQRSYWTSASAGTPGSRNYAGVRSAVVDALVERLIASPDRDSLV
VNCRALDRVLLWGAYVIPGWYSSSVRIAYWDKFGRSETPPATGFDVHSWWVDKEAEKALRNAGTGYGN

Sequences:

>Translated_628_residues
MQYALRRRKGVNMLAVVSGTAARVCMMAVCALWLMQAGAAAAQPLTVLTMDGEPRFAWNGRHFPHADPDAPKGGTLRLSA
RGNFDSMHAFIARGLPAAGIGLTVETLGTGAPDNTLFEYYGLIAQSFEVAPDFSHVTFNINPAARFHDGRPVTAHDVAVT
FRLLMEHGAPRYKQYYAAVDRAEELSPLSVRFYLKEKNNKELPVILAQLPVLPAHYWQNHDFSQPSLVPAVGSGPYRVKD
FAMGSYVEYELVDDYWARDLPVNKGRYNFGTIRYEYYRDETVAREAFKAGEFDLYPEGTAKAWVSAYTGPAVAAGHIRRE
ELTTNRPMGMYGFFFNTRKDLFQDRRVRQALALLFDFEWTNKAIFHGSYTRSTSFFANSELASSGKPSQAELDVLRPFAG
QLPPEVLTSAWDVPRTAGDGNIRPQMRQALALLQQAGWTLQDGRLRDAAGRPFEFTLLLQSAGSTRVVLPYRRNLERLGI
IMNVAMSDPTQYVNRVRSFDYDMIMGRVPQSASPGNEQRSYWTSASAGTPGSRNYAGVRSAVVDALVERLIASPDRDSLV
VNCRALDRVLLWGAYVIPGWYSSSVRIAYWDKFGRSETPPATGFDVHSWWVDKEAEKALRNAGTGYGN
>Mature_628_residues
MQYALRRRKGVNMLAVVSGTAARVCMMAVCALWLMQAGAAAAQPLTVLTMDGEPRFAWNGRHFPHADPDAPKGGTLRLSA
RGNFDSMHAFIARGLPAAGIGLTVETLGTGAPDNTLFEYYGLIAQSFEVAPDFSHVTFNINPAARFHDGRPVTAHDVAVT
FRLLMEHGAPRYKQYYAAVDRAEELSPLSVRFYLKEKNNKELPVILAQLPVLPAHYWQNHDFSQPSLVPAVGSGPYRVKD
FAMGSYVEYELVDDYWARDLPVNKGRYNFGTIRYEYYRDETVAREAFKAGEFDLYPEGTAKAWVSAYTGPAVAAGHIRRE
ELTTNRPMGMYGFFFNTRKDLFQDRRVRQALALLFDFEWTNKAIFHGSYTRSTSFFANSELASSGKPSQAELDVLRPFAG
QLPPEVLTSAWDVPRTAGDGNIRPQMRQALALLQQAGWTLQDGRLRDAAGRPFEFTLLLQSAGSTRVVLPYRRNLERLGI
IMNVAMSDPTQYVNRVRSFDYDMIMGRVPQSASPGNEQRSYWTSASAGTPGSRNYAGVRSAVVDALVERLIASPDRDSLV
VNCRALDRVLLWGAYVIPGWYSSSVRIAYWDKFGRSETPPATGFDVHSWWVDKEAEKALRNAGTGYGN

Specific function: Unknown

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae hbpA [H]

Homologues:

Organism=Escherichia coli, GI87082063, Length=602, Percent_Identity=40.531561461794, Blast_Score=445, Evalue=1e-126,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 70048; Mature: 70048

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYALRRRKGVNMLAVVSGTAARVCMMAVCALWLMQAGAAAAQPLTVLTMDGEPRFAWNG
CCCHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEECC
RHFPHADPDAPKGGTLRLSARGNFDSMHAFIARGLPAAGIGLTVETLGTGAPDNTLFEYY
CCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHH
GLIAQSFEVAPDFSHVTFNINPAARFHDGRPVTAHDVAVTFRLLMEHGAPRYKQYYAAVD
HHHHHHHCCCCCCCEEEEEECCHHEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
RAEELSPLSVRFYLKEKNNKELPVILAQLPVLPAHYWQNHDFSQPSLVPAVGSGPYRVKD
HHHCCCCEEEEEEEECCCCCCCCEEEECCCCCCHHHHCCCCCCCCCCCEECCCCCEEEEE
FAMGSYVEYELVDDYWARDLPVNKGRYNFGTIRYEYYRDETVAREAFKAGEFDLYPEGTA
ECCCCEEEEEEHHHHHHCCCCCCCCCCEEEEEEEEEECCHHHHHHHHHCCCCCCCCCCCH
KAWVSAYTGPAVAAGHIRREELTTNRPMGMYGFFFNTRKDLFQDRRVRQALALLFDFEWT
HHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC
NKAIFHGSYTRSTSFFANSELASSGKPSQAELDVLRPFAGQLPPEVLTSAWDVPRTAGDG
CCEEEECCCCCCCCEEECCHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCC
NIRPQMRQALALLQQAGWTLQDGRLRDAAGRPFEFTLLLQSAGSTRVVLPYRRNLERLGI
CCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEEEEECCCCCEEEEHHHHCHHHHHH
IMNVAMSDPTQYVNRVRSFDYDMIMGRVPQSASPGNEQRSYWTSASAGTPGSRNYAGVRS
EEEEECCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHEECCCCCCCCCCCCHHHHHH
AVVDALVERLIASPDRDSLVVNCRALDRVLLWGAYVIPGWYSSSVRIAYWDKFGRSETPP
HHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCC
ATGFDVHSWWVDKEAEKALRNAGTGYGN
CCCCCCHHEECCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQYALRRRKGVNMLAVVSGTAARVCMMAVCALWLMQAGAAAAQPLTVLTMDGEPRFAWNG
CCCHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEECC
RHFPHADPDAPKGGTLRLSARGNFDSMHAFIARGLPAAGIGLTVETLGTGAPDNTLFEYY
CCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHH
GLIAQSFEVAPDFSHVTFNINPAARFHDGRPVTAHDVAVTFRLLMEHGAPRYKQYYAAVD
HHHHHHHCCCCCCCEEEEEECCHHEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
RAEELSPLSVRFYLKEKNNKELPVILAQLPVLPAHYWQNHDFSQPSLVPAVGSGPYRVKD
HHHCCCCEEEEEEEECCCCCCCCEEEECCCCCCHHHHCCCCCCCCCCCEECCCCCEEEEE
FAMGSYVEYELVDDYWARDLPVNKGRYNFGTIRYEYYRDETVAREAFKAGEFDLYPEGTA
ECCCCEEEEEEHHHHHHCCCCCCCCCCEEEEEEEEEECCHHHHHHHHHCCCCCCCCCCCH
KAWVSAYTGPAVAAGHIRREELTTNRPMGMYGFFFNTRKDLFQDRRVRQALALLFDFEWT
HHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC
NKAIFHGSYTRSTSFFANSELASSGKPSQAELDVLRPFAGQLPPEVLTSAWDVPRTAGDG
CCEEEECCCCCCCCEEECCHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCC
NIRPQMRQALALLQQAGWTLQDGRLRDAAGRPFEFTLLLQSAGSTRVVLPYRRNLERLGI
CCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEEEEECCCCCEEEEHHHHCHHHHHH
IMNVAMSDPTQYVNRVRSFDYDMIMGRVPQSASPGNEQRSYWTSASAGTPGSRNYAGVRS
EEEEECCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHEECCCCCCCCCCCCHHHHHH
AVVDALVERLIASPDRDSLVVNCRALDRVLLWGAYVIPGWYSSSVRIAYWDKFGRSETPP
HHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCC
ATGFDVHSWWVDKEAEKALRNAGTGYGN
CCCCCCHHEECCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097040 [H]