Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
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Accession | NC_007519 |
Length | 3,730,232 |
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The map label for this gene is glnM [H]
Identifier: 78355443
GI number: 78355443
Start: 389595
End: 390428
Strand: Direct
Name: glnM [H]
Synonym: Dde_0396
Alternate gene names: 78355443
Gene position: 389595-390428 (Clockwise)
Preceding gene: 78355442
Following gene: 78355444
Centisome position: 10.44
GC content: 58.63
Gene sequence:
>834_bases ATGTCATCATCCCGTACTGCCGCAGGCCGCCGCGGGGGCCTGTTTGAACGCCTGCCTCTGTGGCTGCTGGCCGCCTTGTT CATTGCCGTGCTGATATGCTGGAACATGGCCGCCGATGCAGACTATACCGCTATTTTCGTGACGGTCCGCAAAGGCGTGG CCGTCACCCTTTATGTATCATTCATCGCATATGCGCTGTCTCTGCTGGCAGGGCTGGTGCTCGGGCTGTGGCGCGTTTCG CGCTGCAGGCTGCTGCGCGAGGCGGCCACGTTTTATATTGAAATAGTGCGCGGCATCCCCATGCTGGTCATTCTGTACTA CATTGCCTTTGTGGGGGCCCCCGGTCTGGTGGATGCACTCAACTGGCTGCTTTCGCCGCTGATTGAAGCCGGTCTGACCG CCCGCATCAGTGTGCGCTCGCTGGATTTTACATGGCGGGCCATCCTGGCGCTTACGGTGGGGTATTCTGCATTTATTGCC GAAATAGTGCGCGCAGGTGTTGAGTCTGTGGCCGCAGGGCAGATGGAAGCGGCGCGTTCTCTGGGACTGAGCCGCTGGCA GGCCATGCGCAAGGTAGTTCTGCCGCAGGCGCTGCGCAATGTGCTGCCGCCTCTGGCTAATGACTTTGTGGCCATGCTCA AGGATTCGGCTCTGGTTTCGGCTCTGGGCGTTCAGGATATCACGCAGCTGGGCAAGGTGTATTCCGCATCCACATTCATG TTTTTTGAAACGTACAATGTTGTGGCTTTTTTGTATCTGGTGATGACCATAGGTCTTTCGCTGTGCATCAGGGGGCTGGA ACGGCGGCGGGGGTGCGGGCCTGTAAGGTTGTAG
Upstream 100 bases:
>100_bases ACGCTCTGAGCCGGCGGTGGTTTTACGAATACAGGTAACGCAACGTGCAGCGGCCGGTTCTGCCCGGGCAAAGCCGTTCC GCTGTATCCGTAAGAGAACG
Downstream 100 bases:
>100_bases ATGTGCAGACCCGCGGTGCGGCAATGCCCCCCGCGGTGCGGTGGCTGAGTGTGCAGACACCCGCACCGCGCGGCGGGCAG TGGGACGGCAGGGCATATCC
Product: amino acid ABC transporter permease
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MSSSRTAAGRRGGLFERLPLWLLAALFIAVLICWNMAADADYTAIFVTVRKGVAVTLYVSFIAYALSLLAGLVLGLWRVS RCRLLREAATFYIEIVRGIPMLVILYYIAFVGAPGLVDALNWLLSPLIEAGLTARISVRSLDFTWRAILALTVGYSAFIA EIVRAGVESVAAGQMEAARSLGLSRWQAMRKVVLPQALRNVLPPLANDFVAMLKDSALVSALGVQDITQLGKVYSASTFM FFETYNVVAFLYLVMTIGLSLCIRGLERRRGCGPVRL
Sequences:
>Translated_277_residues MSSSRTAAGRRGGLFERLPLWLLAALFIAVLICWNMAADADYTAIFVTVRKGVAVTLYVSFIAYALSLLAGLVLGLWRVS RCRLLREAATFYIEIVRGIPMLVILYYIAFVGAPGLVDALNWLLSPLIEAGLTARISVRSLDFTWRAILALTVGYSAFIA EIVRAGVESVAAGQMEAARSLGLSRWQAMRKVVLPQALRNVLPPLANDFVAMLKDSALVSALGVQDITQLGKVYSASTFM FFETYNVVAFLYLVMTIGLSLCIRGLERRRGCGPVRL >Mature_276_residues SSSRTAAGRRGGLFERLPLWLLAALFIAVLICWNMAADADYTAIFVTVRKGVAVTLYVSFIAYALSLLAGLVLGLWRVSR CRLLREAATFYIEIVRGIPMLVILYYIAFVGAPGLVDALNWLLSPLIEAGLTARISVRSLDFTWRAILALTVGYSAFIAE IVRAGVESVAAGQMEAARSLGLSRWQAMRKVVLPQALRNVLPPLANDFVAMLKDSALVSALGVQDITQLGKVYSASTFMF FETYNVVAFLYLVMTIGLSLCIRGLERRRGCGPVRL
Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787030, Length=232, Percent_Identity=34.4827586206897, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI1788226, Length=219, Percent_Identity=31.9634703196347, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI87082239, Length=251, Percent_Identity=30.6772908366534, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI48994930, Length=218, Percent_Identity=33.9449541284404, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1786873, Length=219, Percent_Identity=26.9406392694064, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI1786874, Length=224, Percent_Identity=28.5714285714286, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1788646, Length=226, Percent_Identity=30.5309734513274, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1788645, Length=219, Percent_Identity=28.310502283105, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1787087, Length=209, Percent_Identity=27.2727272727273, Blast_Score=84, Evalue=7e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30321; Mature: 30189
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSRTAAGRRGGLFERLPLWLLAALFIAVLICWNMAADADYTAIFVTVRKGVAVTLYVS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEHHCCHHHHHHHH FIAYALSLLAGLVLGLWRVSRCRLLREAATFYIEIVRGIPMLVILYYIAFVGAPGLVDAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH NWLLSPLIEAGLTARISVRSLDFTWRAILALTVGYSAFIAEIVRAGVESVAAGQMEAARS HHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLSRWQAMRKVVLPQALRNVLPPLANDFVAMLKDSALVSALGVQDITQLGKVYSASTFM HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFETYNVVAFLYLVMTIGLSLCIRGLERRRGCGPVRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SSSRTAAGRRGGLFERLPLWLLAALFIAVLICWNMAADADYTAIFVTVRKGVAVTLYVS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEHHCCHHHHHHHH FIAYALSLLAGLVLGLWRVSRCRLLREAATFYIEIVRGIPMLVILYYIAFVGAPGLVDAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH NWLLSPLIEAGLTARISVRSLDFTWRAILALTVGYSAFIAEIVRAGVESVAAGQMEAARS HHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLSRWQAMRKVVLPQALRNVLPPLANDFVAMLKDSALVSALGVQDITQLGKVYSASTFM HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFETYNVVAFLYLVMTIGLSLCIRGLERRRGCGPVRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7551042; 9384377 [H]