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The map label for this gene is dcrA [H]

Identifier: 78355416

GI number: 78355416

Start: 359512

End: 361347

Strand: Direct

Name: dcrA [H]

Synonym: Dde_0369

Alternate gene names: 78355416

Gene position: 359512-361347 (Clockwise)

Preceding gene: 78355414

Following gene: 78355419

Centisome position: 9.64

GC content: 54.85

Gene sequence:

>1836_bases
TTGCTTGATATACGGATTTGTTCTTCCGCACTGTGGCGGGTATTCTTTCATGCTTTCAAAGGGGGAGGCATCGTGAATTG
TTTCAAGACCATTAAAGGCAAGATAACAGGTATCATTGTTATCTGTATAGTCTCCATGCTCTGCATTCTCGGTTTGTCTG
TGGGTACGCTGGCCAAGCTGCACGGATCTTTTGTCAGCATGAAGGAAAATACACTGGATGGTAAAGTTGCCACAACGGCC
ATAAACAGAGACATTAACTATGTAAGCCGTCTTACCCGGAATATAATGCTTGGTAGTGACGCAGATAAAGATATAGATAA
GCTGCAAAAGCGCATTGAAGCCATAGAAAAGAACTTTGTGATACTTGAAGGCGGCGCTGTGGGTGCAGAAGAGCGACAGC
TTGTTGCCAAGGCAAAGAGAGCTGCGCTTGCTTTTGTACAGGACGGATTGCGCTTTGCCACAAAAATGCAGTCCATTCCT
GAGGGAATGCGGCATCTGCAGTATGCGGAATACGGTCAGTCCGCCACACCGCTGGCGCAGCAGTCGCGTAAATATTTCGG
CGAACTGACTACAATAAAAGACAAAGCCTACGATAACGAAGTCTACCGTTTCAAGGACACCATAGCGTTTCTCAAGTGGT
GCATCATCGGTGTTTCCGCAGGAATCATTGTGCTTATAGTCACATTGTGTCTGCTGCTTATGCGTTCCATTATCCGTCCG
CTGGGCGAACTGACAGCCTACACCGGTGCAGTGGCCGCAGGAGACTACAGCTGCAGCATTGATTCCACACGTTTTTCCGG
CGAACTGGGCGAAACGGCTGTTTCTGTGCATACCATGGTGGACAGTTTGCGGCGCAGCATGACGGAAGCTGAGGAACACA
GCGCGCAGGCAGATGAAAAGGCGGAGCAGGCAAGGAAGGCGACTCTTGAAGCCGAAGAGGAACGGACACGCATTACATCG
CTGCTTAACATGATGCACGATCTTACGTCGCAGGTGGCTGCCATTGTTGACGAGCTGAATGTGGAAGCGGCGGGGCTTGA
AAGTGATTCCAACGAGATTGCGGCAGGGGCGCAGGCCCAGCATGCCCGTTCGCAGGAAACGGCCACCGCCATGGAGGAGA
TGACTGCCACCATAGCGGAAGTGGCGCGCAATGCTTCGCTGGCGGCGCGTAATGTCACGCAGAGCAAAGCCGATGCAGAA
AGCGGTTTTGCCGTGGTGCAGCAGGTTATCACTGCCACCAACGACGTCCATGTGCAGACCACGCGTATGCAAGAGACTCT
GGGCGAACTGAGCCACCGCGTGGAAGGCATCGGAGACATTATGGGCGTGATCACCGATATCGCCGACCAGACAAATCTGC
TGGCGCTGAACGCCGCCATCGAGGCCGCACGCGCAGGTGACGCCGGACGCGGTTTTGCCGTGGTGGCTGACGAAGTGCGT
AAACTGGCCGAAAAAACCATGCAGGCAACCCGCGAGGTGGGCGAGGCCATCAAAGGTATTCAGGCCGGAGCCGGAGCCAA
CGTGGAGAGCATGAACAAGGTTTCGGAAGCCGTGGCCCACAACAATGCGCTGACCAACGAGGCGGGTGCCGCACTGGAAG
CCATCACCGCACTGGTGGGAGAGTCGGCCGTGCAGGTGACTTCCATTGCCACGGCCGCGGAACAGCAGTCTGCCGCCTGC
GAGGAAGTGAATGAAGCCACTGCCGCGGTGAACAGGATCTGCGCGCAGACTTCTGAAGGCATTTCCCGATCCGTGCAGCG
TATCCGCAATATCGCCGCGCTGACTGCCGAACTGCACGGTCTGACGGATAAAATCAGTGACGGTTCCGCAGCCTGA

Upstream 100 bases:

>100_bases
AACTTTTGTTTGCATTTATTCTGCCGGCAGAAAAACGTCCACAGCACATAACCGTTGTAAAGACGAACGTCTGTGGCGTT
CAGTGCCGGTGGCATTTAAT

Downstream 100 bases:

>100_bases
TGTTCATGCACGGGTTGCCATAGATTCTTCCGGTGCATGCGCCGTGGCCCGCAGTGCGGCGTATGCGTATGAAAAAGGCT
TCCCCGTCGGGGGAAGCCTT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 611; Mature: 611

Protein sequence:

>611_residues
MLDIRICSSALWRVFFHAFKGGGIVNCFKTIKGKITGIIVICIVSMLCILGLSVGTLAKLHGSFVSMKENTLDGKVATTA
INRDINYVSRLTRNIMLGSDADKDIDKLQKRIEAIEKNFVILEGGAVGAEERQLVAKAKRAALAFVQDGLRFATKMQSIP
EGMRHLQYAEYGQSATPLAQQSRKYFGELTTIKDKAYDNEVYRFKDTIAFLKWCIIGVSAGIIVLIVTLCLLLMRSIIRP
LGELTAYTGAVAAGDYSCSIDSTRFSGELGETAVSVHTMVDSLRRSMTEAEEHSAQADEKAEQARKATLEAEEERTRITS
LLNMMHDLTSQVAAIVDELNVEAAGLESDSNEIAAGAQAQHARSQETATAMEEMTATIAEVARNASLAARNVTQSKADAE
SGFAVVQQVITATNDVHVQTTRMQETLGELSHRVEGIGDIMGVITDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVR
KLAEKTMQATREVGEAIKGIQAGAGANVESMNKVSEAVAHNNALTNEAGAALEAITALVGESAVQVTSIATAAEQQSAAC
EEVNEATAAVNRICAQTSEGISRSVQRIRNIAALTAELHGLTDKISDGSAA

Sequences:

>Translated_611_residues
MLDIRICSSALWRVFFHAFKGGGIVNCFKTIKGKITGIIVICIVSMLCILGLSVGTLAKLHGSFVSMKENTLDGKVATTA
INRDINYVSRLTRNIMLGSDADKDIDKLQKRIEAIEKNFVILEGGAVGAEERQLVAKAKRAALAFVQDGLRFATKMQSIP
EGMRHLQYAEYGQSATPLAQQSRKYFGELTTIKDKAYDNEVYRFKDTIAFLKWCIIGVSAGIIVLIVTLCLLLMRSIIRP
LGELTAYTGAVAAGDYSCSIDSTRFSGELGETAVSVHTMVDSLRRSMTEAEEHSAQADEKAEQARKATLEAEEERTRITS
LLNMMHDLTSQVAAIVDELNVEAAGLESDSNEIAAGAQAQHARSQETATAMEEMTATIAEVARNASLAARNVTQSKADAE
SGFAVVQQVITATNDVHVQTTRMQETLGELSHRVEGIGDIMGVITDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVR
KLAEKTMQATREVGEAIKGIQAGAGANVESMNKVSEAVAHNNALTNEAGAALEAITALVGESAVQVTSIATAAEQQSAAC
EEVNEATAAVNRICAQTSEGISRSVQRIRNIAALTAELHGLTDKISDGSAA
>Mature_611_residues
MLDIRICSSALWRVFFHAFKGGGIVNCFKTIKGKITGIIVICIVSMLCILGLSVGTLAKLHGSFVSMKENTLDGKVATTA
INRDINYVSRLTRNIMLGSDADKDIDKLQKRIEAIEKNFVILEGGAVGAEERQLVAKAKRAALAFVQDGLRFATKMQSIP
EGMRHLQYAEYGQSATPLAQQSRKYFGELTTIKDKAYDNEVYRFKDTIAFLKWCIIGVSAGIIVLIVTLCLLLMRSIIRP
LGELTAYTGAVAAGDYSCSIDSTRFSGELGETAVSVHTMVDSLRRSMTEAEEHSAQADEKAEQARKATLEAEEERTRITS
LLNMMHDLTSQVAAIVDELNVEAAGLESDSNEIAAGAQAQHARSQETATAMEEMTATIAEVARNASLAARNVTQSKADAE
SGFAVVQQVITATNDVHVQTTRMQETLGELSHRVEGIGDIMGVITDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVR
KLAEKTMQATREVGEAIKGIQAGAGANVESMNKVSEAVAHNNALTNEAGAALEAITALVGESAVQVTSIATAAEQQSAAC
EEVNEATAAVNRICAQTSEGISRSVQRIRNIAALTAELHGLTDKISDGSAA

Specific function: Receptor For The Attractant L-Serine And Related Amino Acids. Is Also Responsible For Chemotaxis Away From A Wide Range Of Repellents, Including Leucine, Indole, And Weak Acids. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of At

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=364, Percent_Identity=28.021978021978, Blast_Score=116, Evalue=4e-27,
Organism=Escherichia coli, GI1788194, Length=241, Percent_Identity=34.0248962655602, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI1788195, Length=431, Percent_Identity=26.6821345707657, Blast_Score=108, Evalue=7e-25,
Organism=Escherichia coli, GI1787690, Length=338, Percent_Identity=28.4023668639053, Blast_Score=99, Evalue=1e-21,
Organism=Escherichia coli, GI1789453, Length=256, Percent_Identity=30.078125, Blast_Score=86, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 65172; Mature: 65172

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCCCCCC
>Mature Secondary Structure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HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]