Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
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Accession | NC_007519 |
Length | 3,730,232 |
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The map label for this gene is 78355419
Identifier: 78355419
GI number: 78355419
Start: 366478
End: 367191
Strand: Direct
Name: 78355419
Synonym: Dde_0372
Alternate gene names: NA
Gene position: 366478-367191 (Clockwise)
Preceding gene: 78355416
Following gene: 78355425
Centisome position: 9.82
GC content: 63.17
Gene sequence:
>714_bases ATGGCAAAGTTTCGTGCGTTGAAAACCCGTATCCGCTGTCTGCTGGCGGATGACGGCTGGGAAGGGAATCTGGACCAGAT AACGGCACTGCCGCCGGCGGAGGTTGTGGGGCCGCTGCTTTCTTTTCTGCTGTCGGGCGGTGAGATGAAATGGCGCGCCG TGACGGCGCTGGGCATTGCCGTTTCACGTATGGCGGACGAGGGCATGGAAGACGCCCGCGTGTTCATGCGCCGGTTGCTG TGGCACATGAATGAGGAGTCCGGAAACATAGGCTGGGGCATTGCCGAGGCCATGGGGGAAATTATGGCCTGTCACGCCCG TCTGGCTGCGGAATATGACAGAATGCTTGTTTCGTATGTGCGCGAGACCGGCGACGACGACAACTTTCTTGACCATCCGC CCCTGCGGCGCGGGGTATACTGGGGTATAGGCAGACTGGCACAGGCGGAGCCGGCGCGCATGCGGCTGGCGGTGCCTGCA CTGGTACGCGCGCTGGATGACGAGGACGGTGAAGGCCGCGGGCTGGCCGCATGGGCGCTGGGAAATCTGGCGGAACACTG CACACCGGACGAAATCAGCCAGGCATGGGCGCGGCTGCTGTCTCTGCAGGGTGATGCATCGTCTGTCGAGCTGTTTGAAG ACCGGCGGCTGTTGTGCACCACCGCGGGCGCTCTGGCTGGGCAGGCGCTGGTCAGGCTTGACGCCGTTTCGTAA
Upstream 100 bases:
>100_bases GAAGGACTATATAGAAAGCGGATAAGCCTTGCAAGGATACATGCTACCCTGTTGTCAATCACAAGGGAATGATTACGATT TGCGTCAGGAGGGCCGCTCT
Downstream 100 bases:
>100_bases GGGCGCTCTGCGCCATGCGCAGACACTGAAGCACCACCAGCGCCACGGCTATGCCGGTCAGCCATCCGCCGATGACATCA CTGGGGTAGTGTTTGCCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Methylated-DNA/Protein-Cysteine Methyltransferase; PBS Lyase HEAT Domain Protein Repeat-Containing Protein
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MAKFRALKTRIRCLLADDGWEGNLDQITALPPAEVVGPLLSFLLSGGEMKWRAVTALGIAVSRMADEGMEDARVFMRRLL WHMNEESGNIGWGIAEAMGEIMACHARLAAEYDRMLVSYVRETGDDDNFLDHPPLRRGVYWGIGRLAQAEPARMRLAVPA LVRALDDEDGEGRGLAAWALGNLAEHCTPDEISQAWARLLSLQGDASSVELFEDRRLLCTTAGALAGQALVRLDAVS
Sequences:
>Translated_237_residues MAKFRALKTRIRCLLADDGWEGNLDQITALPPAEVVGPLLSFLLSGGEMKWRAVTALGIAVSRMADEGMEDARVFMRRLL WHMNEESGNIGWGIAEAMGEIMACHARLAAEYDRMLVSYVRETGDDDNFLDHPPLRRGVYWGIGRLAQAEPARMRLAVPA LVRALDDEDGEGRGLAAWALGNLAEHCTPDEISQAWARLLSLQGDASSVELFEDRRLLCTTAGALAGQALVRLDAVS >Mature_236_residues AKFRALKTRIRCLLADDGWEGNLDQITALPPAEVVGPLLSFLLSGGEMKWRAVTALGIAVSRMADEGMEDARVFMRRLLW HMNEESGNIGWGIAEAMGEIMACHARLAAEYDRMLVSYVRETGDDDNFLDHPPLRRGVYWGIGRLAQAEPARMRLAVPAL VRALDDEDGEGRGLAAWALGNLAEHCTPDEISQAWARLLSLQGDASSVELFEDRRLLCTTAGALAGQALVRLDAVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25975; Mature: 25844
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS50077 HEAT_REPEAT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKFRALKTRIRCLLADDGWEGNLDQITALPPAEVVGPLLSFLLSGGEMKWRAVTALGIA CCHHHHHHHHHHEEEECCCCCCCHHHEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH VSRMADEGMEDARVFMRRLLWHMNEESGNIGWGIAEAMGEIMACHARLAAEYDRMLVSYV HHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RETGDDDNFLDHPPLRRGVYWGIGRLAQAEPARMRLAVPALVRALDDEDGEGRGLAAWAL HHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHH GNLAEHCTPDEISQAWARLLSLQGDASSVELFEDRRLLCTTAGALAGQALVRLDAVS HHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AKFRALKTRIRCLLADDGWEGNLDQITALPPAEVVGPLLSFLLSGGEMKWRAVTALGIA CHHHHHHHHHHEEEECCCCCCCHHHEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH VSRMADEGMEDARVFMRRLLWHMNEESGNIGWGIAEAMGEIMACHARLAAEYDRMLVSYV HHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RETGDDDNFLDHPPLRRGVYWGIGRLAQAEPARMRLAVPALVRALDDEDGEGRGLAAWAL HHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHH GNLAEHCTPDEISQAWARLLSLQGDASSVELFEDRRLLCTTAGALAGQALVRLDAVS HHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA