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The map label for this gene is yeeY [H]

Identifier: 78355396

GI number: 78355396

Start: 338678

End: 339562

Strand: Direct

Name: yeeY [H]

Synonym: Dde_0349

Alternate gene names: 78355396

Gene position: 338678-339562 (Clockwise)

Preceding gene: 78355394

Following gene: 78355404

Centisome position: 9.08

GC content: 63.62

Gene sequence:

>885_bases
GTGTTTTCTCTTGATCAGCTTGAGGCTTTCCGCGCGGCGGCGGAAACCGGTTCTTTTTCCGCTGCGGCCCGCAGACTGGG
CAAGGTGCAGTCTGCCGTCAGCACCGCGGTGTCCAATCTGGAAATCGATCTGGGGGTAGAGCTTTTTGACCGCAGGGGGC
ACAAGGCGGTGCTTACTCCGGCGGGAGAAACTCTGCTGCGTGAGGCGTGGACCGTACTGGGCGAATGCGACCGTCTGCTG
GAACGTGCCGTGGCCATTGCCGGCGGTGAAGAGGCCAGACTGAGTCTGGCTGTGGACGACGCCGTGCCGGTGGACTGGTT
TGTGGACGTGCTGGCGGCCTTTGGCGAGCGTTTTCCTTTTGTGCAGCTGGAAACCTATTACGGCGCCATGGGCGATGTGG
CCCAGATGGTGGGCGAAGGACGCGCCGATCTGGGCATCGTGATGCCGGTCAGCGGCACTCCGGCCGCCATAGATGCCGTA
CTGGTGGGGCATATGCCTTATGTGCCGGTGGCGGCAGCGCATCATCCTCTTGCCGCACTGCCTGCGGTGGGGCGGCGTGA
CCTTATGCGGTACCGGCATATTGTTGTTGCCAGCCGTACAGGTGACAGAGAGCCCGACTGGGCGGGGCACGGCGGGCCGG
TGTGGTTGCAGGAATCCACATATGCCACATTGCAGCTGGTGTTGCGGCATGCGGGCTGGGCGTCGCTGCCGGGCCATCTG
GTGGACAGGCACGTGCGCGCAGGGCGGCTTGTGGTGCTGCCGCTTGATTTTCATGCGGTGAAGTTTGCGGCTCCGGTGTT
TGTGGTCCGGCGTCCGGGAGCGGCACAGGGCGTTGCCGGTATATGGCTGCGCAAGGAACTGGAAGGGCTGCGGCTTGAAG
AGTAA

Upstream 100 bases:

>100_bases
CGGCAGTGCCGCTTGCCCAGAATGTGGGTATGAACTATCACATTGAGTGAGGGTGTAAAGATAGAGTCTATCTAATTTTG
TGATAGAAAATGGAGGCGAC

Downstream 100 bases:

>100_bases
GTCTGCCCGCAAGTGCCCGGGCGAGTGCGCCCGTGAGTGATCGGGCAAGTGCGCCCGCGGGTGCTCGGGCGGATGTGTAC
AGGCTGCACAGTCACGGCAT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MFSLDQLEAFRAAAETGSFSAAARRLGKVQSAVSTAVSNLEIDLGVELFDRRGHKAVLTPAGETLLREAWTVLGECDRLL
ERAVAIAGGEEARLSLAVDDAVPVDWFVDVLAAFGERFPFVQLETYYGAMGDVAQMVGEGRADLGIVMPVSGTPAAIDAV
LVGHMPYVPVAAAHHPLAALPAVGRRDLMRYRHIVVASRTGDREPDWAGHGGPVWLQESTYATLQLVLRHAGWASLPGHL
VDRHVRAGRLVVLPLDFHAVKFAAPVFVVRRPGAAQGVAGIWLRKELEGLRLEE

Sequences:

>Translated_294_residues
MFSLDQLEAFRAAAETGSFSAAARRLGKVQSAVSTAVSNLEIDLGVELFDRRGHKAVLTPAGETLLREAWTVLGECDRLL
ERAVAIAGGEEARLSLAVDDAVPVDWFVDVLAAFGERFPFVQLETYYGAMGDVAQMVGEGRADLGIVMPVSGTPAAIDAV
LVGHMPYVPVAAAHHPLAALPAVGRRDLMRYRHIVVASRTGDREPDWAGHGGPVWLQESTYATLQLVLRHAGWASLPGHL
VDRHVRAGRLVVLPLDFHAVKFAAPVFVVRRPGAAQGVAGIWLRKELEGLRLEE
>Mature_294_residues
MFSLDQLEAFRAAAETGSFSAAARRLGKVQSAVSTAVSNLEIDLGVELFDRRGHKAVLTPAGETLLREAWTVLGECDRLL
ERAVAIAGGEEARLSLAVDDAVPVDWFVDVLAAFGERFPFVQLETYYGAMGDVAQMVGEGRADLGIVMPVSGTPAAIDAV
LVGHMPYVPVAAAHHPLAALPAVGRRDLMRYRHIVVASRTGDREPDWAGHGGPVWLQESTYATLQLVLRHAGWASLPGHL
VDRHVRAGRLVVLPLDFHAVKFAAPVFVVRRPGAAQGVAGIWLRKELEGLRLEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=294, Percent_Identity=31.2925170068027, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1787949, Length=268, Percent_Identity=30.5970149253731, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI145693105, Length=258, Percent_Identity=27.906976744186, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1789492, Length=298, Percent_Identity=29.1946308724832, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1786508, Length=292, Percent_Identity=25, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1790262, Length=269, Percent_Identity=27.5092936802974, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1787806, Length=250, Percent_Identity=28, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1786713, Length=183, Percent_Identity=32.7868852459016, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI157672245, Length=245, Percent_Identity=28.1632653061224, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1786401, Length=293, Percent_Identity=29.0102389078498, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1787879, Length=190, Percent_Identity=27.3684210526316, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI1788296, Length=218, Percent_Identity=28.4403669724771, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788748, Length=147, Percent_Identity=30.6122448979592, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1789506, Length=140, Percent_Identity=26.4285714285714, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787530, Length=175, Percent_Identity=28, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1788481, Length=179, Percent_Identity=30.7262569832402, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 31702; Mature: 31702

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSLDQLEAFRAAAETGSFSAAARRLGKVQSAVSTAVSNLEIDLGVELFDRRGHKAVLTP
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHCCCCEEEECC
AGETLLREAWTVLGECDRLLERAVAIAGGEEARLSLAVDDAVPVDWFVDVLAAFGERFPF
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCE
VQLETYYGAMGDVAQMVGEGRADLGIVMPVSGTPAAIDAVLVGHMPYVPVAAAHHPLAAL
EEEHHHHCCHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCHHCCCCHHHC
PAVGRRDLMRYRHIVVASRTGDREPDWAGHGGPVWLQESTYATLQLVLRHAGWASLPGHL
CCCCHHHHHHHHHEEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCHHH
VDRHVRAGRLVVLPLDFHAVKFAAPVFVVRRPGAAQGVAGIWLRKELEGLRLEE
HHHHHCCCEEEEEECCHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFSLDQLEAFRAAAETGSFSAAARRLGKVQSAVSTAVSNLEIDLGVELFDRRGHKAVLTP
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHCCCCEEEECC
AGETLLREAWTVLGECDRLLERAVAIAGGEEARLSLAVDDAVPVDWFVDVLAAFGERFPF
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCE
VQLETYYGAMGDVAQMVGEGRADLGIVMPVSGTPAAIDAVLVGHMPYVPVAAAHHPLAAL
EEEHHHHCCHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCHHCCCCHHHC
PAVGRRDLMRYRHIVVASRTGDREPDWAGHGGPVWLQESTYATLQLVLRHAGWASLPGHL
CCCCHHHHHHHHHEEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCHHH
VDRHVRAGRLVVLPLDFHAVKFAAPVFVVRRPGAAQGVAGIWLRKELEGLRLEE
HHHHHCCCEEEEEECCHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]