| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is eriC [C]
Identifier: 78355357
GI number: 78355357
Start: 298670
End: 300517
Strand: Direct
Name: eriC [C]
Synonym: Dde_0310
Alternate gene names: 78355357
Gene position: 298670-300517 (Clockwise)
Preceding gene: 78355356
Following gene: 78355359
Centisome position: 8.01
GC content: 61.04
Gene sequence:
>1848_bases ATGACAACGGATGATGACGGCGGACGGAACGGAAGCCGCGATGACGGGACCTGCCCCGTACCGTCCCGGCCTTTTTCGCT GCGCAGTCTGCAGCACGGCTGGCGGACTTTGCGGTCGGGGCGTCTTGCCAAGCTGGACAGCCATCTGCCCATGCTGCTTA TGGCTGTGCTGGTGGGGGTGCTGGGCGGATACGGCGCGGTGCTGTTCAAGTTTGTCATCAAAGGTGTGCAGTTTCTTTTT TACGGAAACACTGCGGACTTTCTTGAATTTCATGACTCGGTGCCGTACTGGGCGGTCATTGCCGCTCCTGCCGCGGGCGG GCTGGCGGTCGGCTATCTTGTTTCGCGTTTTGCCCGCGAGGCGCGGGGGCACGGCGTGCCGGAGGTAATGGAGGCCATTG CCCTGCATGACGGGCGTATCCGCAAGCGGGTGGCGCTGGTCAAGATTTTTGCCTCGGCCATCAGCATAAGTTCCGGCGGC TCGGTGGGGCGCGAAGGGCCCATCGTGCAGATAGGGTCGGGCATAGGGTCCACCGTGGGACAGATGCTTAAAGTGGGCAG GCCCCAGCGGCGTACGCTGGTGGGCTGCGGTGCTGCCGCGGGCATCGCCGCCACGTTCAACGCGCCGGTGGCCGGTGTGC TGTTCGCCCTTGAACTGCTGCTGGGTGATTTCGGTCTGGCGGCGTTTTCTCCCGTGGTGCTTTCATCCGTGGTTGCCACC ACCATTTCACGCCATTATTTCGGCGACTTTCCCGCGTTTGTGGTGCCCGGCTACGAAGTTGCCTCGCTGTGGGAGTACGG CATCTATCCTTTTCTGGGCATTGTGTGCGGCGCGGTGGCGGTGATTTTTGTGACGGTGCTGTACCGTACTGAAGACCTGT GCGAGGCAGTGCGCCTGCCGGACCCGCTCAAAGCCTGTCTGGGCGGAGCCGCCGTGGGGTGTATGCTGTTGTGGTTTCCT CATGTTTTCGGTGTGGGATACGGCGGCATCAACCTTGCCCTGCAGAACGGTCTGGGGTGGCAGATGATGCTGCTGCTTGT GGGGGTTAAAATCATCGCCACGTCTGTAACCATCGGCAGCGGCGGGTCCGGCGGGGTGTTCGCTCCTTCGCTTTTCATAG GTTCCATGACCGGTGGTTTTTTCGGCTGGGCCGCGGGGCAGCTTTTTCCCGGTATAACGGCATTGCCGGGCGCATATGCG CTGGTCGCCATGGGCGGTCTGGTGGCCGGCACCACCCACGCTCCCATTACAGCCATTCTGATTATTTTTGAACTGACAGG CGACTACCAGATAATTCTGCCGCTTATGGTCACCTGCATACTGGCCACCGTGACGGCTTCCACTCTGAAAGACGGCTCCA TTTATACCATAAAGCTGCTGCGCCGCGGGGTGGATATTGCCGGCGGCATGGAGCAGAACCTGTTACGCAGTCTCAAGGTG GGCGAATTCATGCGGGCGGACCCGCCCACCATATGGGAAGGCACGCCGCTGCATGACGTGATTCTGGCTTTTCGCCAGCG TGATGTCTCGTACCTGCATGTGGTGGACAGGGAGGGCGGACTGAAGGGCATTATTTCGTTCCGCGACCTGCGTGCAGTGC TGGCGGATGAATATCCGGCGCGCCTTGTCATTGCCGGCGACATAGCAACCACGCGTCTTGTCACGGTGACGGAGGGCGAT TCCATACAATGCGCGCTGGGGCGGATGAGCCGCAGCGGCATAGCCCAGCTGCCGGTTGTGGAACTGGGGGATGCCCGCCG GTTGAAAGGCATACTGAGAGAAAAAGATGTCATTCATGCCTATGATATGGCCGTGGTGCGGCGTCAGATGGAGCACGGTG CCCCCTAG
Upstream 100 bases:
>100_bases TTTTGCCGGCGTGCGGCTTGGCATACGCTGTTGTCCGCGTTAGAATGCGGCAGTGTGTCCGGTGTTGTCCTGCCGGGCAG ACAGATGCAGGGAGTGCGCT
Downstream 100 bases:
>100_bases TGCTCCGCCGGACGGTCTCTGCGTGGCGGCTGCCGCGCGGGTGCCGCTTGCGCGACCGGAATTTTTGCGCCTGTCGTTTT TAACGTAACGTGCCGAAATG
Product: hypothetical protein
Products: Cl Ion [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 615; Mature: 614
Protein sequence:
>615_residues MTTDDDGGRNGSRDDGTCPVPSRPFSLRSLQHGWRTLRSGRLAKLDSHLPMLLMAVLVGVLGGYGAVLFKFVIKGVQFLF YGNTADFLEFHDSVPYWAVIAAPAAGGLAVGYLVSRFAREARGHGVPEVMEAIALHDGRIRKRVALVKIFASAISISSGG SVGREGPIVQIGSGIGSTVGQMLKVGRPQRRTLVGCGAAAGIAATFNAPVAGVLFALELLLGDFGLAAFSPVVLSSVVAT TISRHYFGDFPAFVVPGYEVASLWEYGIYPFLGIVCGAVAVIFVTVLYRTEDLCEAVRLPDPLKACLGGAAVGCMLLWFP HVFGVGYGGINLALQNGLGWQMMLLLVGVKIIATSVTIGSGGSGGVFAPSLFIGSMTGGFFGWAAGQLFPGITALPGAYA LVAMGGLVAGTTHAPITAILIIFELTGDYQIILPLMVTCILATVTASTLKDGSIYTIKLLRRGVDIAGGMEQNLLRSLKV GEFMRADPPTIWEGTPLHDVILAFRQRDVSYLHVVDREGGLKGIISFRDLRAVLADEYPARLVIAGDIATTRLVTVTEGD SIQCALGRMSRSGIAQLPVVELGDARRLKGILREKDVIHAYDMAVVRRQMEHGAP
Sequences:
>Translated_615_residues MTTDDDGGRNGSRDDGTCPVPSRPFSLRSLQHGWRTLRSGRLAKLDSHLPMLLMAVLVGVLGGYGAVLFKFVIKGVQFLF YGNTADFLEFHDSVPYWAVIAAPAAGGLAVGYLVSRFAREARGHGVPEVMEAIALHDGRIRKRVALVKIFASAISISSGG SVGREGPIVQIGSGIGSTVGQMLKVGRPQRRTLVGCGAAAGIAATFNAPVAGVLFALELLLGDFGLAAFSPVVLSSVVAT TISRHYFGDFPAFVVPGYEVASLWEYGIYPFLGIVCGAVAVIFVTVLYRTEDLCEAVRLPDPLKACLGGAAVGCMLLWFP HVFGVGYGGINLALQNGLGWQMMLLLVGVKIIATSVTIGSGGSGGVFAPSLFIGSMTGGFFGWAAGQLFPGITALPGAYA LVAMGGLVAGTTHAPITAILIIFELTGDYQIILPLMVTCILATVTASTLKDGSIYTIKLLRRGVDIAGGMEQNLLRSLKV GEFMRADPPTIWEGTPLHDVILAFRQRDVSYLHVVDREGGLKGIISFRDLRAVLADEYPARLVIAGDIATTRLVTVTEGD SIQCALGRMSRSGIAQLPVVELGDARRLKGILREKDVIHAYDMAVVRRQMEHGAP >Mature_614_residues TTDDDGGRNGSRDDGTCPVPSRPFSLRSLQHGWRTLRSGRLAKLDSHLPMLLMAVLVGVLGGYGAVLFKFVIKGVQFLFY GNTADFLEFHDSVPYWAVIAAPAAGGLAVGYLVSRFAREARGHGVPEVMEAIALHDGRIRKRVALVKIFASAISISSGGS VGREGPIVQIGSGIGSTVGQMLKVGRPQRRTLVGCGAAAGIAATFNAPVAGVLFALELLLGDFGLAAFSPVVLSSVVATT ISRHYFGDFPAFVVPGYEVASLWEYGIYPFLGIVCGAVAVIFVTVLYRTEDLCEAVRLPDPLKACLGGAAVGCMLLWFPH VFGVGYGGINLALQNGLGWQMMLLLVGVKIIATSVTIGSGGSGGVFAPSLFIGSMTGGFFGWAAGQLFPGITALPGAYAL VAMGGLVAGTTHAPITAILIIFELTGDYQIILPLMVTCILATVTASTLKDGSIYTIKLLRRGVDIAGGMEQNLLRSLKVG EFMRADPPTIWEGTPLHDVILAFRQRDVSYLHVVDREGGLKGIISFRDLRAVLADEYPARLVIAGDIATTRLVTVTEGDS IQCALGRMSRSGIAQLPVVELGDARRLKGILREKDVIHAYDMAVVRRQMEHGAP
Specific function: Selective chloride channel [C]
COG id: COG0038
COG function: function code P; Chloride channel protein EriC
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chloride channel (TC 2.A.49) family. ClcB subfamily [H]
Homologues:
Organism=Homo sapiens, GI189217923, Length=457, Percent_Identity=24.72647702407, Blast_Score=87, Evalue=5e-17, Organism=Homo sapiens, GI189217921, Length=457, Percent_Identity=24.72647702407, Blast_Score=87, Evalue=5e-17, Organism=Homo sapiens, GI4557473, Length=458, Percent_Identity=26.2008733624454, Blast_Score=87, Evalue=7e-17, Organism=Escherichia coli, GI1786350, Length=446, Percent_Identity=34.7533632286996, Blast_Score=159, Evalue=4e-40, Organism=Escherichia coli, GI87081943, Length=411, Percent_Identity=32.1167883211679, Blast_Score=151, Evalue=1e-37, Organism=Caenorhabditis elegans, GI71996455, Length=415, Percent_Identity=23.855421686747, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71996452, Length=415, Percent_Identity=23.855421686747, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71985148, Length=198, Percent_Identity=28.2828282828283, Blast_Score=66, Evalue=5e-11, Organism=Caenorhabditis elegans, GI71985141, Length=198, Percent_Identity=28.2828282828283, Blast_Score=66, Evalue=6e-11, Organism=Drosophila melanogaster, GI24665008, Length=533, Percent_Identity=24.577861163227, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI45551566, Length=519, Percent_Identity=23.8921001926782, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014743 - InterPro: IPR001807 [H]
Pfam domain/function: PF00654 Voltage_CLC [H]
EC number: NA
Molecular weight: Translated: 65117; Mature: 64986
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDDDGGRNGSRDDGTCPVPSRPFSLRSLQHGWRTLRSGRLAKLDSHLPMLLMAVLVGV CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHH LGGYGAVLFKFVIKGVQFLFYGNTADFLEFHDSVPYWAVIAAPAAGGLAVGYLVSRFARE HHHHHHHHHHHHHHHHHEEEECCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHH ARGHGVPEVMEAIALHDGRIRKRVALVKIFASAISISSGGSVGREGPIVQIGSGIGSTVG HCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHH QMLKVGRPQRRTLVGCGAAAGIAATFNAPVAGVLFALELLLGDFGLAAFSPVVLSSVVAT HHHHCCCCCHHEEEECCCHHCHHEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH TISRHYFGDFPAFVVPGYEVASLWEYGIYPFLGIVCGAVAVIFVTVLYRTEDLCEAVRLP HHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DPLKACLGGAAVGCMLLWFPHVFGVGYGGINLALQNGLGWQMMLLLVGVKIIATSVTIGS CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHEEEECC GGSGGVFAPSLFIGSMTGGFFGWAAGQLFPGITALPGAYALVAMGGLVAGTTHAPITAIL CCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCHHCCHHHHHHHHHHHHCCCCCCHHHHHH IIFELTGDYQIILPLMVTCILATVTASTLKDGSIYTIKLLRRGVDIAGGMEQNLLRSLKV EEEEECCCCEEHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCCCCCCHHHHHHHHHHH GEFMRADPPTIWEGTPLHDVILAFRQRDVSYLHVVDREGGLKGIISFRDLRAVLADEYPA HHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCC RLVIAGDIATTRLVTVTEGDSIQCALGRMSRSGIAQLPVVELGDARRLKGILREKDVIHA EEEEEECCCEEEEEEEECCCCEEEHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHH YDMAVVRRQMEHGAP HHHHHHHHHHHCCCC >Mature Secondary Structure TTDDDGGRNGSRDDGTCPVPSRPFSLRSLQHGWRTLRSGRLAKLDSHLPMLLMAVLVGV CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHH LGGYGAVLFKFVIKGVQFLFYGNTADFLEFHDSVPYWAVIAAPAAGGLAVGYLVSRFARE HHHHHHHHHHHHHHHHHEEEECCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHH ARGHGVPEVMEAIALHDGRIRKRVALVKIFASAISISSGGSVGREGPIVQIGSGIGSTVG HCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHH QMLKVGRPQRRTLVGCGAAAGIAATFNAPVAGVLFALELLLGDFGLAAFSPVVLSSVVAT HHHHCCCCCHHEEEECCCHHCHHEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH TISRHYFGDFPAFVVPGYEVASLWEYGIYPFLGIVCGAVAVIFVTVLYRTEDLCEAVRLP HHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DPLKACLGGAAVGCMLLWFPHVFGVGYGGINLALQNGLGWQMMLLLVGVKIIATSVTIGS CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHEEEECC GGSGGVFAPSLFIGSMTGGFFGWAAGQLFPGITALPGAYALVAMGGLVAGTTHAPITAIL CCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCHHCCHHHHHHHHHHHHCCCCCCHHHHHH IIFELTGDYQIILPLMVTCILATVTASTLKDGSIYTIKLLRRGVDIAGGMEQNLLRSLKV EEEEECCCCEEHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCCCCCCHHHHHHHHHHH GEFMRADPPTIWEGTPLHDVILAFRQRDVSYLHVVDREGGLKGIISFRDLRAVLADEYPA HHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCC RLVIAGDIATTRLVTVTEGDSIQCALGRMSRSGIAQLPVVELGDARRLKGILREKDVIHA EEEEEECCCEEEEEEEECCCCEEEHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHH YDMAVVRRQMEHGAP HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Cl Ion [Periplasm] [C]
Specific reaction: Cl Ion [Periplasm] = Cl Ion [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]