| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is cysU [C]
Identifier: 78355356
GI number: 78355356
Start: 297783
End: 298565
Strand: Direct
Name: cysU [C]
Synonym: Dde_0309
Alternate gene names: 78355356
Gene position: 297783-298565 (Clockwise)
Preceding gene: 78355355
Following gene: 78355357
Centisome position: 7.98
GC content: 58.37
Gene sequence:
>783_bases GTGAAACAGGTATTTTTTGTTTTTCTGGTATTTTTTTTCGGTCTGCCTGTGGTTGTGCTGGCACTGTATGCCGCGGCACC GGGCTGGAGCTGGCCGCATCTGCTGCCGCAGGATTTTTCGGCACGCGCAGTACAGTACCTGTGGCAGCAGCGGGCGGAAA TAGGCAGACACATAGGCACGTCGCTGTGGTATGCCCTGCTGACAACGGGGCTGAGTTTTGTGCTGTGCCTTGCTCCGGCG CGGCATTTCGCCCGGTGCACGTTCAGGGGGCGGGCCCTGCTGGAAGCTTTGCTTCTTGCGCCCGCGCTGGTGCCGGTGAT GACATTCTCCATGGGAGTGCACCATGTCTTTATCATCACCGGTCTGGCAGATACCGTCACCGGCGTGGTGCTGGTTCTTA CCGTGTTCTGTTATCCGTACATGCTGCGGGCGCTGACGGCCGGTTTTGCCTCGTTCGGCGAAGGGTATGACCTGTGTGCG CGCAATCTGGGTGCCGGATGGTGGCTGCGGCTGACCCGCGTGGAACTGCCGCTGCTGGCTCCTGCCGTGGTTGCCGGAGC CTCTGTTGTTTTTCTGGTGGCGTTTTCAGACTATTTTCTGGTGTTTCTTATCGGCGGCGGGGTGGTGCCTTCATTCACGG GCTATCTGTTTCCGCTGCTCGCTTCTTCTGACAGGGCGCTGGCATCGGCGTTGTCACTGGTGTTTCTTGTTATTCCCGTT GTTCTTTTTGTTCTGGTGGAACTGCTTGTGGCGCGTGTTTACCGCAGACGCGGCATGTACTAG
Upstream 100 bases:
>100_bases AAGCCATGGCGGTGCTGACGGTCATGTTTCTGTTCTCTCTTGTTTTTGTGGCGCTGTACAGCCGGCTGGTGCGTCGTTTC GGACTGGGGGAACGCAAACT
Downstream 100 bases:
>100_bases CCGCTTTTGCCGGCGTGCGGCTTGGCATACGCTGTTGTCCGCGTTAGAATGCGGCAGTGTGTCCGGTGTTGTCCTGCCGG GCAGACAGATGCAGGGAGTG
Product: ABC transporter permease
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: ABC-Type Transporter Permease Protein; ABC Transporter Permease
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MKQVFFVFLVFFFGLPVVVLALYAAAPGWSWPHLLPQDFSARAVQYLWQQRAEIGRHIGTSLWYALLTTGLSFVLCLAPA RHFARCTFRGRALLEALLLAPALVPVMTFSMGVHHVFIITGLADTVTGVVLVLTVFCYPYMLRALTAGFASFGEGYDLCA RNLGAGWWLRLTRVELPLLAPAVVAGASVVFLVAFSDYFLVFLIGGGVVPSFTGYLFPLLASSDRALASALSLVFLVIPV VLFVLVELLVARVYRRRGMY
Sequences:
>Translated_260_residues MKQVFFVFLVFFFGLPVVVLALYAAAPGWSWPHLLPQDFSARAVQYLWQQRAEIGRHIGTSLWYALLTTGLSFVLCLAPA RHFARCTFRGRALLEALLLAPALVPVMTFSMGVHHVFIITGLADTVTGVVLVLTVFCYPYMLRALTAGFASFGEGYDLCA RNLGAGWWLRLTRVELPLLAPAVVAGASVVFLVAFSDYFLVFLIGGGVVPSFTGYLFPLLASSDRALASALSLVFLVIPV VLFVLVELLVARVYRRRGMY >Mature_260_residues MKQVFFVFLVFFFGLPVVVLALYAAAPGWSWPHLLPQDFSARAVQYLWQQRAEIGRHIGTSLWYALLTTGLSFVLCLAPA RHFARCTFRGRALLEALLLAPALVPVMTFSMGVHHVFIITGLADTVTGVVLVLTVFCYPYMLRALTAGFASFGEGYDLCA RNLGAGWWLRLTRVELPLLAPAVVAGASVVFLVAFSDYFLVFLIGGGVVPSFTGYLFPLLASSDRALASALSLVFLVIPV VLFVLVELLVARVYRRRGMY
Specific function: Part Of The Abc Transporter Complex Cysawtp (Tc 3.A.1.6.1) Involved In Sulfate/Thiosulfate Import. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]
COG id: COG1177
COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28604; Mature: 28604
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQVFFVFLVFFFGLPVVVLALYAAAPGWSWPHLLPQDFSARAVQYLWQQRAEIGRHIGT CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SLWYALLTTGLSFVLCLAPARHFARCTFRGRALLEALLLAPALVPVMTFSMGVHHVFIIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLADTVTGVVLVLTVFCYPYMLRALTAGFASFGEGYDLCARNLGAGWWLRLTRVELPLLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHH PAVVAGASVVFLVAFSDYFLVFLIGGGVVPSFTGYLFPLLASSDRALASALSLVFLVIPV HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH VLFVLVELLVARVYRRRGMY HHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKQVFFVFLVFFFGLPVVVLALYAAAPGWSWPHLLPQDFSARAVQYLWQQRAEIGRHIGT CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SLWYALLTTGLSFVLCLAPARHFARCTFRGRALLEALLLAPALVPVMTFSMGVHHVFIIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLADTVTGVVLVLTVFCYPYMLRALTAGFASFGEGYDLCARNLGAGWWLRLTRVELPLLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHH PAVVAGASVVFLVAFSDYFLVFLIGGGVVPSFTGYLFPLLASSDRALASALSLVFLVIPV HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH VLFVLVELLVARVYRRRGMY HHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA