| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355334
Identifier: 78355334
GI number: 78355334
Start: 276029
End: 276673
Strand: Direct
Name: 78355334
Synonym: Dde_0287
Alternate gene names: NA
Gene position: 276029-276673 (Clockwise)
Preceding gene: 78355332
Following gene: 304570599
Centisome position: 7.4
GC content: 58.6
Gene sequence:
>645_bases ATGAGTAACAGTGCAAAGGCCATCAAGGAAAATCTCGCCAGAGCAAAGGCGTATTTCAACAGGCATGATGTGCAGCGGGC CGTTGCCGCCACAGCGGCGGCGCTGCAGGCATGGGTGCAGGCCGGCGAACCGGCGGGCAAGAATGAACTGGTAGGCGCCC TGCGCGAAGTGGTGGCGCTGCTCGGAAGGGCCGACGAGGTCACAGGAGAGCTGGGCGGCCCCCCGGTGTGGCAGCCGGGG CAGGAAAAAAGTCTGCTTATCCAGCTGGCAAAAGTGTTGCGTGCCCTGCAGCATCAGGAACTGGATGAAGATCATCGCAA GATTCTTGAACGCAAGCAGAAACTGGACAGGCTGTTCATATACGGCAGCCGCCTGCTGGAAACCCATAAGCCCAAAGAAG CCGATGAAGCCTTTCAGGAAGCCATGACCTATCATAAAGATGAGGACGTCATATTCCGGATGATGGGCGAACGCATGATG GCCGCATCGCAGCCGGCGCTGGCTTTGCGGTATCTGAAGAGGGCTCTCAAGGCTTCTCCCGAGCGTCAGGTGGTGGAAAT GACCATTGATGCCTACAAGCGTTCGGGAAATCACGGTGCGGCTGCCAAGCTGCAGCAGCAGTTCGCTGCGCTGCTTGGCT CCTGA
Upstream 100 bases:
>100_bases CCGGAAGACTATCATGGCTGCGGAACGGTGTACACAATCGAGTGCCGTTCGCGCGTGCTGACCGGCAGAGTGATGATGCA CGGCTGAAACTGAGGTGCAA
Downstream 100 bases:
>100_bases TGCCGTGACCGTGGCGGGGCGGAAATACCCGTGCAGTCATGAAGGCAAACCGCACGAGACAGCACTGTCTCATGCGGTTT TTGCTGTTCTGCGGGCTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MSNSAKAIKENLARAKAYFNRHDVQRAVAATAAALQAWVQAGEPAGKNELVGALREVVALLGRADEVTGELGGPPVWQPG QEKSLLIQLAKVLRALQHQELDEDHRKILERKQKLDRLFIYGSRLLETHKPKEADEAFQEAMTYHKDEDVIFRMMGERMM AASQPALALRYLKRALKASPERQVVEMTIDAYKRSGNHGAAAKLQQQFAALLGS
Sequences:
>Translated_214_residues MSNSAKAIKENLARAKAYFNRHDVQRAVAATAAALQAWVQAGEPAGKNELVGALREVVALLGRADEVTGELGGPPVWQPG QEKSLLIQLAKVLRALQHQELDEDHRKILERKQKLDRLFIYGSRLLETHKPKEADEAFQEAMTYHKDEDVIFRMMGERMM AASQPALALRYLKRALKASPERQVVEMTIDAYKRSGNHGAAAKLQQQFAALLGS >Mature_213_residues SNSAKAIKENLARAKAYFNRHDVQRAVAATAAALQAWVQAGEPAGKNELVGALREVVALLGRADEVTGELGGPPVWQPGQ EKSLLIQLAKVLRALQHQELDEDHRKILERKQKLDRLFIYGSRLLETHKPKEADEAFQEAMTYHKDEDVIFRMMGERMMA ASQPALALRYLKRALKASPERQVVEMTIDAYKRSGNHGAAAKLQQQFAALLGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23824; Mature: 23693
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSAKAIKENLARAKAYFNRHDVQRAVAATAAALQAWVQAGEPAGKNELVGALREVVAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LGRADEVTGELGGPPVWQPGQEKSLLIQLAKVLRALQHQELDEDHRKILERKQKLDRLFI HCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH YGSRLLETHKPKEADEAFQEAMTYHKDEDVIFRMMGERMMAASQPALALRYLKRALKASP HHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC ERQVVEMTIDAYKRSGNHGAAAKLQQQFAALLGS HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SNSAKAIKENLARAKAYFNRHDVQRAVAATAAALQAWVQAGEPAGKNELVGALREVVAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LGRADEVTGELGGPPVWQPGQEKSLLIQLAKVLRALQHQELDEDHRKILERKQKLDRLFI HCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH YGSRLLETHKPKEADEAFQEAMTYHKDEDVIFRMMGERMMAASQPALALRYLKRALKASP HHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC ERQVVEMTIDAYKRSGNHGAAAKLQQQFAALLGS HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA