| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355332
Identifier: 78355332
GI number: 78355332
Start: 274528
End: 275628
Strand: Direct
Name: 78355332
Synonym: Dde_0285
Alternate gene names: NA
Gene position: 274528-275628 (Clockwise)
Preceding gene: 78355331
Following gene: 78355334
Centisome position: 7.36
GC content: 64.4
Gene sequence:
>1101_bases ATGGTGCTGAAAAGAGTGTTTCCGGCGGTGGTTGCCGTATGTCTGCTGGCATGTGCCGCCCATGCGTCGCCGTTTACAGG CAGCGGGGGCAATGCCCGCGGTCCCGCTTCCGAAAGCGGTTTTTTTGCGCTGGAGCCGCCCGCGGGGCAGGTTTCCGGCG CGGACGGTCAGCATGCCGCACCAAAAGAAGCGCGGGATGCGGCTGAGCGCGGGACCGGCGGCGGATTTACCGGCGGCAGG GGGCATCAGCACGCGCCCGCGGCCGTTTCCGGTGCGGATGCCGGACAGGGCGTAGAGCCTTTTTTCACTCCGCCGCCCCT TTATAACCGCATCATCAGTCTGTCCACCAGAGCGCAGCATTATTTGCGGGGGCAGATGGTTTCCTTTGCCTCGGGCATCA AGGAGTCACCTTACGGTACTTCCTTCTGGCTGTTTCTGGCCGTGTCATTTGTGTACGGCGTGGTGCACGCCATAGGGCCG GGACACGGCAAGGCCGTGGTCTTCTGCTATTTTCTGGGGCGTTCGGGCGGAATATCCCGGGGGCTGCTTATGGGCAACCT GCTGACATCTGTTCATGTGCTGTCGGCGGCGGTGCTGGTTTTTGCCGCGCATCTGCTGTTCGAGCAGGGCGCCGCCCGCG GTATCCACGGTGTGAGCGGTCCCGTGCAGCGTTTCAGCTACGGCATCATCATGCTGGTGGGCGCCGCCATGCTGCTGCAT GCACTGTACGAGCTTTTCAGCGGCAGGCTGGGCGGACGGGTGCGGCAGGCCACGGCGGAATGTCCTGCAGGTTATGGCAG TCTGACTGCCGTTTCCGTACTGGCCGGACTGGTGCCCTGCCCGGCAGCGGTGCTTATACTTACCTTTGCGCGGGGGCTGG ACATCACACAGGCGGGAGTGCTGGCGCTGGTGGCGCTGGCGCTGGGCATGGGGCTGACCACATCGGCGTTCGGCCTGCTG AGCATGGTTTCGCGCAGGGTGCTGCTGCACAGCACGGGGCGCAGCACACGGGCCGTTGTGGCCGGTTATGCGCTGCTTTC CGTCACGGGGGCGCTGGCTGTGACGCTGCTGGGCTTTATCATGTATACCGGCAGCGTCTGA
Upstream 100 bases:
>100_bases TGAAGGGTGCGGACAAAGCAAGGGTGGTGCTGCAGGAAGCTCCTGAACTTGCATATTATTACGGGCAGATAGTGCCCTAT GCCATAGAGCTGGAGTTGTA
Downstream 100 bases:
>100_bases GGTATAAAAAAGGCATCCCTGCGGATGCCTTTTTTTGTTACAGGACGGCGCGGATGCGCCGCGGGCCGGCTATTCGTCGA CCCATGAAATACATTCCACA
Product: ABC transporter permease component-like
Products: NA
Alternate protein names: ABC Transporter Permease Component-Like
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MVLKRVFPAVVAVCLLACAAHASPFTGSGGNARGPASESGFFALEPPAGQVSGADGQHAAPKEARDAAERGTGGGFTGGR GHQHAPAAVSGADAGQGVEPFFTPPPLYNRIISLSTRAQHYLRGQMVSFASGIKESPYGTSFWLFLAVSFVYGVVHAIGP GHGKAVVFCYFLGRSGGISRGLLMGNLLTSVHVLSAAVLVFAAHLLFEQGAARGIHGVSGPVQRFSYGIIMLVGAAMLLH ALYELFSGRLGGRVRQATAECPAGYGSLTAVSVLAGLVPCPAAVLILTFARGLDITQAGVLALVALALGMGLTTSAFGLL SMVSRRVLLHSTGRSTRAVVAGYALLSVTGALAVTLLGFIMYTGSV
Sequences:
>Translated_366_residues MVLKRVFPAVVAVCLLACAAHASPFTGSGGNARGPASESGFFALEPPAGQVSGADGQHAAPKEARDAAERGTGGGFTGGR GHQHAPAAVSGADAGQGVEPFFTPPPLYNRIISLSTRAQHYLRGQMVSFASGIKESPYGTSFWLFLAVSFVYGVVHAIGP GHGKAVVFCYFLGRSGGISRGLLMGNLLTSVHVLSAAVLVFAAHLLFEQGAARGIHGVSGPVQRFSYGIIMLVGAAMLLH ALYELFSGRLGGRVRQATAECPAGYGSLTAVSVLAGLVPCPAAVLILTFARGLDITQAGVLALVALALGMGLTTSAFGLL SMVSRRVLLHSTGRSTRAVVAGYALLSVTGALAVTLLGFIMYTGSV >Mature_366_residues MVLKRVFPAVVAVCLLACAAHASPFTGSGGNARGPASESGFFALEPPAGQVSGADGQHAAPKEARDAAERGTGGGFTGGR GHQHAPAAVSGADAGQGVEPFFTPPPLYNRIISLSTRAQHYLRGQMVSFASGIKESPYGTSFWLFLAVSFVYGVVHAIGP GHGKAVVFCYFLGRSGGISRGLLMGNLLTSVHVLSAAVLVFAAHLLFEQGAARGIHGVSGPVQRFSYGIIMLVGAAMLLH ALYELFSGRLGGRVRQATAECPAGYGSLTAVSVLAGLVPCPAAVLILTFARGLDITQAGVLALVALALGMGLTTSAFGLL SMVSRRVLLHSTGRSTRAVVAGYALLSVTGALAVTLLGFIMYTGSV
Specific function: Unknown
COG id: COG2215
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37396; Mature: 37396
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLKRVFPAVVAVCLLACAAHASPFTGSGGNARGPASESGFFALEPPAGQVSGADGQHAA CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC PKEARDAAERGTGGGFTGGRGHQHAPAAVSGADAGQGVEPFFTPPPLYNRIISLSTRAQH CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH YLRGQMVSFASGIKESPYGTSFWLFLAVSFVYGVVHAIGPGHGKAVVFCYFLGRSGGISR HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHH GLLMGNLLTSVHVLSAAVLVFAAHLLFEQGAARGIHGVSGPVQRFSYGIIMLVGAAMLLH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ALYELFSGRLGGRVRQATAECPAGYGSLTAVSVLAGLVPCPAAVLILTFARGLDITQAGV HHHHHHCCHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHH LALVALALGMGLTTSAFGLLSMVSRRVLLHSTGRSTRAVVAGYALLSVTGALAVTLLGFI HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MYTGSV HHCCCC >Mature Secondary Structure MVLKRVFPAVVAVCLLACAAHASPFTGSGGNARGPASESGFFALEPPAGQVSGADGQHAA CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC PKEARDAAERGTGGGFTGGRGHQHAPAAVSGADAGQGVEPFFTPPPLYNRIISLSTRAQH CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH YLRGQMVSFASGIKESPYGTSFWLFLAVSFVYGVVHAIGPGHGKAVVFCYFLGRSGGISR HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHH GLLMGNLLTSVHVLSAAVLVFAAHLLFEQGAARGIHGVSGPVQRFSYGIIMLVGAAMLLH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ALYELFSGRLGGRVRQATAECPAGYGSLTAVSVLAGLVPCPAAVLILTFARGLDITQAGV HHHHHHCCHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHH LALVALALGMGLTTSAFGLLSMVSRRVLLHSTGRSTRAVVAGYALLSVTGALAVTLLGFI HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MYTGSV HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA