Click here to switch to the map view.

The map label for this gene is yvgK [H]

Identifier: 78355166

GI number: 78355166

Start: 110609

End: 111538

Strand: Direct

Name: yvgK [H]

Synonym: Dde_0119

Alternate gene names: 78355166

Gene position: 110609-111538 (Clockwise)

Preceding gene: 78355163

Following gene: 78355169

Centisome position: 2.97

GC content: 59.25

Gene sequence:

>930_bases
ATGAAAAACCTGCTTTCCACACGCGAAGTTGCCCAGTTTCTGGGTGTGAACGAGAAGATGGTCTACACCCTTATTTCCGA
CAAGGGGCTGCCTGCGACCAAGGTCACGGGCAAGTGGCTTTTTCCTGCGCACCTTGTGGAGCAGTGGGTGGAAAATTCCA
CCATCAATTTTCCCCGCCGTCACGAATCAGCACCCCCTGCTGAGGGGGTGCTGCTGGTGGCGGGAAGCAATGACATTCTT
TTTGAGCGAACCTTGAGGCTGTTTATGGACGCCCAGCCGGACTATATTGCCGCTTTTGCCAACATGGGCAGTATGGGGGG
CATCAAGGCGCTTCGTCGGGGTGTCTGCCATATGGCGACCAGCCATCTGAAGCAGGAAGACGGTGCGGAGTACAATTTTG
CCCATGCCGAACGGGAGCTTGAAGAGCGTCCGGCTGTGGTCAATTTCTGCCTGCGTGAACAGGGGCTGCTGGTGCCGCGG
GGGAACCCCGCCGGTATTTCGTGTGTGGCAGATGTGGCCGGTGGCGGGCTGACGGTGGCCAACCGCCCTCTGGGTACGGG
CACGCGGCTGCTGTTTGATTCCGAGCTGGCGGCGGCCGGTATAAATCCCGCGCGTCTGAAAGGGTACGAAAACGAATTTT
CGCGCCATATGGATGTGGGGCTTGAAGTCCTTTCCGGCAGGGCGGATACAGCGCCCGCCATACGGGCCGTTGCCGGGCTG
CTGGGGCTTGATTTCATTCCGCTGGGGTGGGAACGGTTCGACCTGCTCATTCCGCGCGATACGTTTTTTGAACGTCACAT
ACAGCTGTTTATGGGATTGTTCACCACGCCGGAATTTGCAGCACTGGCGGGGCAGCTGGAAGGGTATGACACCAGCCGTG
CCGGCAGGGTCGTTTTTCCGGGCGAGACGCTGCGCGAGACCCGACGTTGA

Upstream 100 bases:

>100_bases
ATGCTGCCGATGCGTTTGCCGTGACGCAGGGCCTCCGGTTGCCCGCAGCCGGTGTTTGCAGTAGTTTCTTACGCATCGGG
AATCAACAACAGGAAGATGT

Downstream 100 bases:

>100_bases
GAAGGAAGCGGCATTGCCGCGAACCGGTTTTTATCTGCCTGCCTGTTTCGTCGCCGTAAGAGCGTGCGTCACCGGCAGGC
TTTTCAGTCTGCGGGCCGCA

Product: excisionase/Xis

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKNLLSTREVAQFLGVNEKMVYTLISDKGLPATKVTGKWLFPAHLVEQWVENSTINFPRRHESAPPAEGVLLVAGSNDIL
FERTLRLFMDAQPDYIAAFANMGSMGGIKALRRGVCHMATSHLKQEDGAEYNFAHAERELEERPAVVNFCLREQGLLVPR
GNPAGISCVADVAGGGLTVANRPLGTGTRLLFDSELAAAGINPARLKGYENEFSRHMDVGLEVLSGRADTAPAIRAVAGL
LGLDFIPLGWERFDLLIPRDTFFERHIQLFMGLFTTPEFAALAGQLEGYDTSRAGRVVFPGETLRETRR

Sequences:

>Translated_309_residues
MKNLLSTREVAQFLGVNEKMVYTLISDKGLPATKVTGKWLFPAHLVEQWVENSTINFPRRHESAPPAEGVLLVAGSNDIL
FERTLRLFMDAQPDYIAAFANMGSMGGIKALRRGVCHMATSHLKQEDGAEYNFAHAERELEERPAVVNFCLREQGLLVPR
GNPAGISCVADVAGGGLTVANRPLGTGTRLLFDSELAAAGINPARLKGYENEFSRHMDVGLEVLSGRADTAPAIRAVAGL
LGLDFIPLGWERFDLLIPRDTFFERHIQLFMGLFTTPEFAALAGQLEGYDTSRAGRVVFPGETLRETRR
>Mature_309_residues
MKNLLSTREVAQFLGVNEKMVYTLISDKGLPATKVTGKWLFPAHLVEQWVENSTINFPRRHESAPPAEGVLLVAGSNDIL
FERTLRLFMDAQPDYIAAFANMGSMGGIKALRRGVCHMATSHLKQEDGAEYNFAHAERELEERPAVVNFCLREQGLLVPR
GNPAGISCVADVAGGGLTVANRPLGTGTRLLFDSELAAAGINPARLKGYENEFSRHMDVGLEVLSGRADTAPAIRAVAGL
LGLDFIPLGWERFDLLIPRDTFFERHIQLFMGLFTTPEFAALAGQLEGYDTSRAGRVVFPGETLRETRR

Specific function: Unknown

COG id: COG1910

COG function: function code P; Periplasmic molybdate-binding protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR010093 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33941; Mature: 33941

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLLSTREVAQFLGVNEKMVYTLISDKGLPATKVTGKWLFPAHLVEQWVENSTINFPRR
CCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
HESAPPAEGVLLVAGSNDILFERTLRLFMDAQPDYIAAFANMGSMGGIKALRRGVCHMAT
CCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH
SHLKQEDGAEYNFAHAERELEERPAVVNFCLREQGLLVPRGNPAGISCVADVAGGGLTVA
HHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHCCEEEECCCCCCCCCEEECCCCCEEEC
NRPLGTGTRLLFDSELAAAGINPARLKGYENEFSRHMDVGLEVLSGRADTAPAIRAVAGL
CCCCCCCCEEEEECCHHHCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LGLDFIPLGWERFDLLIPRDTFFERHIQLFMGLFTTPEFAALAGQLEGYDTSRAGRVVFP
HHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEC
GETLRETRR
CHHHHHHCC
>Mature Secondary Structure
MKNLLSTREVAQFLGVNEKMVYTLISDKGLPATKVTGKWLFPAHLVEQWVENSTINFPRR
CCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
HESAPPAEGVLLVAGSNDILFERTLRLFMDAQPDYIAAFANMGSMGGIKALRRGVCHMAT
CCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH
SHLKQEDGAEYNFAHAERELEERPAVVNFCLREQGLLVPRGNPAGISCVADVAGGGLTVA
HHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHCCEEEECCCCCCCCCEEECCCCCEEEC
NRPLGTGTRLLFDSELAAAGINPARLKGYENEFSRHMDVGLEVLSGRADTAPAIRAVAGL
CCCCCCCCEEEEECCHHHCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LGLDFIPLGWERFDLLIPRDTFFERHIQLFMGLFTTPEFAALAGQLEGYDTSRAGRVVFP
HHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEC
GETLRETRR
CHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]