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The map label for this gene is hdrC [H]

Identifier: 78224614

GI number: 78224614

Start: 3843333

End: 3843983

Strand: Direct

Name: hdrC [H]

Synonym: Gmet_3424

Alternate gene names: 78224614

Gene position: 3843333-3843983 (Clockwise)

Preceding gene: 78224592

Following gene: 78224615

Centisome position: 96.15

GC content: 61.29

Gene sequence:

>651_bases
ATGTCGCTCCGCACCGCGATTTCCGCCCCCCTTTCTTCCTTCGGCCACCCCAGCCCAGGAGGTCGTATGAAGCACTCAAC
AATGCGTCTCTCCATCGAGACGATGAATCTGGACTTCGTGAAGAAGGTCGAAGCCCTGTCGGGCAGTTCCGTGCGGCGCT
GTTTCCAGTGCGGCAAGTGCTCGGCGGGGTGTCCCATGCGCAGCTTCATGGAGCACCCCCCCAACCGGATCGTGCGGTTC
CTGCAACTGGGGCAGTACGAGCGGGTCCTGGCGGGCCGGAGCATCTGGTACTGCGCCTCGTGCGAGACCTGCACCACCCG
CTGCCCCAACAAGGTGGACCTTGCGGCCATCATGGATGCCCTGCGCAAATGCTCCTGGGACGCCAAGGGGCCGTCCAAGG
AATCCTACGTGCAGCTGGCGAACCGGCTCTTCATCGACAACATCCGCACCTACGGCCGACAGTACGAGATGCGGCTCGCC
GCGGTCTTCAACGTAAAGAGCGGCCAGTTTTTGAAGGATCTCATGCTCGGCCCCAAACTCATCACCAAGGGGAAGCTCAA
GGTGTTCCACCAGAAGAACAAGAACCTTGCCGAGATCGAGCAGATCTTCAAGCGGATCGAGGAGCTGCGCAAAAAGGGGG
AGGCACCGTGA

Upstream 100 bases:

>100_bases
TCAAACAACGACTAATAGAATATTTGTTTTAGTAAAAGTAAAACCGTCATTTGCTTTTTCATAAATTACGCGACGGAGCA
CTAATTCCTCCCCCTTCCCC

Downstream 100 bases:

>100_bases
CCCCTGCAAAGAAACTCCTTTCTTACTCCTACTACCCGGGCTGCTCGCTGCACGCCTCGGCCAAGGAATACGACGAATCG
ACCCGCGGGCTGTTCAAGGC

Product: heterodisulfide reductase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MSLRTAISAPLSSFGHPSPGGRMKHSTMRLSIETMNLDFVKKVEALSGSSVRRCFQCGKCSAGCPMRSFMEHPPNRIVRF
LQLGQYERVLAGRSIWYCASCETCTTRCPNKVDLAAIMDALRKCSWDAKGPSKESYVQLANRLFIDNIRTYGRQYEMRLA
AVFNVKSGQFLKDLMLGPKLITKGKLKVFHQKNKNLAEIEQIFKRIEELRKKGEAP

Sequences:

>Translated_216_residues
MSLRTAISAPLSSFGHPSPGGRMKHSTMRLSIETMNLDFVKKVEALSGSSVRRCFQCGKCSAGCPMRSFMEHPPNRIVRF
LQLGQYERVLAGRSIWYCASCETCTTRCPNKVDLAAIMDALRKCSWDAKGPSKESYVQLANRLFIDNIRTYGRQYEMRLA
AVFNVKSGQFLKDLMLGPKLITKGKLKVFHQKNKNLAEIEQIFKRIEELRKKGEAP
>Mature_215_residues
SLRTAISAPLSSFGHPSPGGRMKHSTMRLSIETMNLDFVKKVEALSGSSVRRCFQCGKCSAGCPMRSFMEHPPNRIVRFL
QLGQYERVLAGRSIWYCASCETCTTRCPNKVDLAAIMDALRKCSWDAKGPSKESYVQLANRLFIDNIRTYGRQYEMRLAA
VFNVKSGQFLKDLMLGPKLITKGKLKVFHQKNKNLAEIEQIFKRIEELRKKGEAP

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrC may carry electrons from hydrogenase to hdrA [H]

COG id: COG1150

COG function: function code C; Heterodisulfide reductase, subunit C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR017680
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: NA

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 24472; Mature: 24341

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRTAISAPLSSFGHPSPGGRMKHSTMRLSIETMNLDFVKKVEALSGSSVRRCFQCGKC
CCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHCCHHHHHHHHCCCC
SAGCPMRSFMEHPPNRIVRFLQLGQYERVLAGRSIWYCASCETCTTRCPNKVDLAAIMDA
CCCCCHHHHHHCCHHHHHHHHHHCCHHHHHHCCCEEEEECCCHHHHCCCCCCCHHHHHHH
LRKCSWDAKGPSKESYVQLANRLFIDNIRTYGRQYEMRLAAVFNVKSGQFLKDLMLGPKL
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCHH
ITKGKLKVFHQKNKNLAEIEQIFKRIEELRKKGEAP
HCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLRTAISAPLSSFGHPSPGGRMKHSTMRLSIETMNLDFVKKVEALSGSSVRRCFQCGKC
CCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHCCHHHHHHHHCCCC
SAGCPMRSFMEHPPNRIVRFLQLGQYERVLAGRSIWYCASCETCTTRCPNKVDLAAIMDA
CCCCCHHHHHHCCHHHHHHHHHHCCHHHHHHCCCEEEEECCCHHHHCCCCCCCHHHHHHH
LRKCSWDAKGPSKESYVQLANRLFIDNIRTYGRQYEMRLAAVFNVKSGQFLKDLMLGPKL
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCHH
ITKGKLKVFHQKNKNLAEIEQIFKRIEELRKKGEAP
HCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]