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The map label for this gene is hdrB [H]

Identifier: 78224615

GI number: 78224615

Start: 3843980

End: 3844870

Strand: Direct

Name: hdrB [H]

Synonym: Gmet_3425

Alternate gene names: 78224615

Gene position: 3843980-3844870 (Clockwise)

Preceding gene: 78224614

Following gene: 78224616

Centisome position: 96.16

GC content: 64.87

Gene sequence:

>891_bases
GTGACCCCTGCAAAGAAACTCCTTTCTTACTCCTACTACCCGGGCTGCTCGCTGCACGCCTCGGCCAAGGAATACGACGA
ATCGACCCGCGGGCTGTTCAAGGCCCTCGGGATCGGCCTGCAGGAAGTCCCCGACTGGCTCTGCTGCGGAGCCACGCCGG
CCCACAACGTGGACGAGTTGCTGTCGCTCTCCCTGTGCGCCAAGAACCTCTCCCTGGCCGAAGGGGTTGAGGGGGACCTG
GCCGTGGCCTGCGCCGCCTGTTTCTCGCGCCTGAAGGTCACCCAGCACCACCTGGCCGACAACGAGACCAAGCGCAAGCA
GGTGGAGTACGCCATCGACGGGACTGTGAACCTGGCCAAACCGGTGAAGCACCTGCTGGAGATCCTGGCGAAGGACTTTG
GTCTCGACCGGCTCACAGAGGCAGTACAGAAACCCCTTGCCGGCTTGAAAGTCGCCTGCTACTACGGCTGCCTCCTGACC
CGCCCCCCCGAGGTGCCGCAACTGGACTGCGTCGAGGCCCCCACCATCATGGAGCGGGTCATCGGCGCCGTGGGGGCCGA
GACCGTGGGCTGGAGCCACCGGATGGAGTGCTGCGGCGCCAACTTCACCCTGTCGCGCCCCGGCGTGGTCCTCAAGCTCT
CCGGCAGTATCCTCGATTCCGCCAAGGCCGCCGGCGCCGACTGCCTCATGGTCGCCTGCCCCTTGTGCCACGGCAACCTG
GACATCAGGCAGAAAGAGATCGAGGAGGCCACAGGGCAGCGCTTTGGCATGCCGGTCTTCTACATGACCCAGCTCCTGGC
CCTGGCTGTAGGGGTCGCGCCGGGAAAACTCGGCTTTGACAGCATGATCGTGAACCCGCTGCCGCTGTTGCGGGAAAAAC
AGCTTTTGTAA

Upstream 100 bases:

>100_bases
AGGGGAAGCTCAAGGTGTTCCACCAGAAGAACAAGAACCTTGCCGAGATCGAGCAGATCTTCAAGCGGATCGAGGAGCTG
CGCAAAAAGGGGGAGGCACC

Downstream 100 bases:

>100_bases
TAACACGGAGAAACGGAGCACACGGAGAACGGACAATAATTAACAGGCCTCATCAAAGGGTATTCAAGGATTAAGAGACG
TCGAGGCGTAAACCAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MTPAKKLLSYSYYPGCSLHASAKEYDESTRGLFKALGIGLQEVPDWLCCGATPAHNVDELLSLSLCAKNLSLAEGVEGDL
AVACAACFSRLKVTQHHLADNETKRKQVEYAIDGTVNLAKPVKHLLEILAKDFGLDRLTEAVQKPLAGLKVACYYGCLLT
RPPEVPQLDCVEAPTIMERVIGAVGAETVGWSHRMECCGANFTLSRPGVVLKLSGSILDSAKAAGADCLMVACPLCHGNL
DIRQKEIEEATGQRFGMPVFYMTQLLALAVGVAPGKLGFDSMIVNPLPLLREKQLL

Sequences:

>Translated_296_residues
MTPAKKLLSYSYYPGCSLHASAKEYDESTRGLFKALGIGLQEVPDWLCCGATPAHNVDELLSLSLCAKNLSLAEGVEGDL
AVACAACFSRLKVTQHHLADNETKRKQVEYAIDGTVNLAKPVKHLLEILAKDFGLDRLTEAVQKPLAGLKVACYYGCLLT
RPPEVPQLDCVEAPTIMERVIGAVGAETVGWSHRMECCGANFTLSRPGVVLKLSGSILDSAKAAGADCLMVACPLCHGNL
DIRQKEIEEATGQRFGMPVFYMTQLLALAVGVAPGKLGFDSMIVNPLPLLREKQLL
>Mature_295_residues
TPAKKLLSYSYYPGCSLHASAKEYDESTRGLFKALGIGLQEVPDWLCCGATPAHNVDELLSLSLCAKNLSLAEGVEGDLA
VACAACFSRLKVTQHHLADNETKRKQVEYAIDGTVNLAKPVKHLLEILAKDFGLDRLTEAVQKPLAGLKVACYYGCLLTR
PPEVPQLDCVEAPTIMERVIGAVGAETVGWSHRMECCGANFTLSRPGVVLKLSGSILDSAKAAGADCLMVACPLCHGNLD
IRQKEIEEATGQRFGMPVFYMTQLLALAVGVAPGKLGFDSMIVNPLPLLREKQLL

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrB may have a function in energy transduction [H]

COG id: COG2048

COG function: function code C; Heterodisulfide reductase, subunit B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hdrB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017678
- InterPro:   IPR004017 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 31859; Mature: 31727

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPAKKLLSYSYYPGCSLHASAKEYDESTRGLFKALGIGLQEVPDWLCCGATPAHNVDEL
CCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCHHCCCCCCCCCHHHH
LSLSLCAKNLSLAEGVEGDLAVACAACFSRLKVTQHHLADNETKRKQVEYAIDGTVNLAK
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHH
PVKHLLEILAKDFGLDRLTEAVQKPLAGLKVACYYGCLLTRPPEVPQLDCVEAPTIMERV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
IGAVGAETVGWSHRMECCGANFTLSRPGVVLKLSGSILDSAKAAGADCLMVACPLCHGNL
HHHHCCHHCCHHHHHHHCCCCCEECCCCEEEEECCCHHHHHHHCCCCEEEHCCHHHCCCC
DIRQKEIEEATGQRFGMPVFYMTQLLALAVGVAPGKLGFDSMIVNPLPLLREKQLL
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHCCCC
>Mature Secondary Structure 
TPAKKLLSYSYYPGCSLHASAKEYDESTRGLFKALGIGLQEVPDWLCCGATPAHNVDEL
CCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCHHCCCCCCCCCHHHH
LSLSLCAKNLSLAEGVEGDLAVACAACFSRLKVTQHHLADNETKRKQVEYAIDGTVNLAK
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHH
PVKHLLEILAKDFGLDRLTEAVQKPLAGLKVACYYGCLLTRPPEVPQLDCVEAPTIMERV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
IGAVGAETVGWSHRMECCGANFTLSRPGVVLKLSGSILDSAKAAGADCLMVACPLCHGNL
HHHHCCHHCCHHHHHHHCCCCCEECCCCEEEEECCCHHHHHHHCCCCEEEHCCHHHCCCC
DIRQKEIEEATGQRFGMPVFYMTQLLALAVGVAPGKLGFDSMIVNPLPLLREKQLL
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]