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The map label for this gene is ykaA [H]

Identifier: 78224324

GI number: 78224324

Start: 3528959

End: 3529576

Strand: Reverse

Name: ykaA [H]

Synonym: Gmet_3132

Alternate gene names: 78224324

Gene position: 3529576-3528959 (Counterclockwise)

Preceding gene: 78224327

Following gene: 78224323

Centisome position: 88.3

GC content: 56.96

Gene sequence:

>618_bases
ATGTTCGGCCTTATTCCGAAGGAAGAAAAATTTTTCGCCCTGTTCAAGGACATGACCGCCAATATCATCGAGGGGGCCAA
GCTCCTCAAGGATATGATCGACAACTACGACGATCCCCAGGGGATGCAGAAGCGGATCAAGGACGTGGAGCACAAGGGTG
ACCACATAACCCACGACATCATCCAGAAACTCAACAAAAGCTTCGTTACCCCCCTGGACCGGGAAGACATCTATGCTCTC
TCCGCTGCCCTGGACGATATCCTGGACCTGATTGACGCATCATCGCAGCGCTTCATCATGTACAACGTGGAGAAGCCGAC
CCCGGAGGCCAAGGAGCTCGCCTTCATCATCCTCAAGTCGTGCGAGGCGGTTGCCAAGGCGGTGGCCCAGCTCGGCGGCA
AGTTCGAGCACATCGCCGAATCCTGCGTGGAGGTGAATGCCCTGGAGAACGAGGCTGACCGGGTCTGCCGCGAGGCCATC
AGCCGCCTCTTCGACGAGGAGAAGGACCCGATCCAGCTCATCAAGTGGAAAGAGATCTACGAGACCCTGGAGCGGGCAAC
CGACAAGTGCGAGGACGCGGCCAACATTCTGGAAAGCGTGGTGGTGAAAAATGCTTGA

Upstream 100 bases:

>100_bases
AATAATTTCATAGGCAGTGGGGGGATTTTATGCTATGTCTCATCTGTTTTGGACCTTAAACCCGCGGCGTTTTGCTGCCG
CACCAGAAGCGGAGGGAGCA

Downstream 100 bases:

>100_bases
TGCCACGTTGATCATGCTCGTCCTGGTCATCGGAGCGGCGCTGGCGTTCGACTACATCAACGGCTTCCACGATACGGCAA
ATGCCATCGCCACCTGCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MFGLIPKEEKFFALFKDMTANIIEGAKLLKDMIDNYDDPQGMQKRIKDVEHKGDHITHDIIQKLNKSFVTPLDREDIYAL
SAALDDILDLIDASSQRFIMYNVEKPTPEAKELAFIILKSCEAVAKAVAQLGGKFEHIAESCVEVNALENEADRVCREAI
SRLFDEEKDPIQLIKWKEIYETLERATDKCEDAANILESVVVKNA

Sequences:

>Translated_205_residues
MFGLIPKEEKFFALFKDMTANIIEGAKLLKDMIDNYDDPQGMQKRIKDVEHKGDHITHDIIQKLNKSFVTPLDREDIYAL
SAALDDILDLIDASSQRFIMYNVEKPTPEAKELAFIILKSCEAVAKAVAQLGGKFEHIAESCVEVNALENEADRVCREAI
SRLFDEEKDPIQLIKWKEIYETLERATDKCEDAANILESVVVKNA
>Mature_205_residues
MFGLIPKEEKFFALFKDMTANIIEGAKLLKDMIDNYDDPQGMQKRIKDVEHKGDHITHDIIQKLNKSFVTPLDREDIYAL
SAALDDILDLIDASSQRFIMYNVEKPTPEAKELAFIILKSCEAVAKAVAQLGGKFEHIAESCVEVNALENEADRVCREAI
SRLFDEEKDPIQLIKWKEIYETLERATDKCEDAANILESVVVKNA

Specific function: Unknown

COG id: COG1392

COG function: function code P; Phosphate transport regulator (distant homolog of PhoU)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0111 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012347
- InterPro:   IPR018445 [H]

Pfam domain/function: PF01865 PhoU_div [H]

EC number: NA

Molecular weight: Translated: 23276; Mature: 23276

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGLIPKEEKFFALFKDMTANIIEGAKLLKDMIDNYDDPQGMQKRIKDVEHKGDHITHDI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHH
IQKLNKSFVTPLDREDIYALSAALDDILDLIDASSQRFIMYNVEKPTPEAKELAFIILKS
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHH
CEAVAKAVAQLGGKFEHIAESCVEVNALENEADRVCREAISRLFDEEKDPIQLIKWKEIY
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ETLERATDKCEDAANILESVVVKNA
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFGLIPKEEKFFALFKDMTANIIEGAKLLKDMIDNYDDPQGMQKRIKDVEHKGDHITHDI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHH
IQKLNKSFVTPLDREDIYALSAALDDILDLIDASSQRFIMYNVEKPTPEAKELAFIILKS
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHH
CEAVAKAVAQLGGKFEHIAESCVEVNALENEADRVCREAISRLFDEEKDPIQLIKWKEIY
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ETLERATDKCEDAANILESVVVKNA
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]