Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78224310
Identifier: 78224310
GI number: 78224310
Start: 3517119
End: 3517625
Strand: Reverse
Name: 78224310
Synonym: Gmet_3118
Alternate gene names: NA
Gene position: 3517625-3517119 (Counterclockwise)
Preceding gene: 78224311
Following gene: 78224309
Centisome position: 88.0
GC content: 59.17
Gene sequence:
>507_bases ATGACCCTCGCGAGCGGTGTGGCCGAAGCGACCAGGCTTACCGAGGAGCAGGTTGCCGGCTTCATCATCGATGCCACCAA GGAAGTATTCAACACCATGGTGATGATGGAGCTGGAGGACCAGTACCCCCTCCAGGAGCCGGTTACGAAATTCCGCTGCA GCGTCACCGGGATGGTGGGGCTTGCCGGTACCTATTCGGGAATCCTTTCCATTCACTGTCCCTTGGAGTTTGCCCTGCGG ATCACCTCAAACATGCTCGGCATGGAGGTGGACCAAGTGGGCGAGGATGTGAACGACGCCCTGGGGGAGATTGCCAACAT GCTGGGCGGCTACGTGAAGATGGTCCTCTCCAAAGGCGGGATGGACCTCCACCTTTCGGTCCCGACGGTCATATCCGGCG AGGAGTACACCCTGAACGCCATGGCCGACAGCGACTGCGTCATCATTCCCTTCGTCAACGAGTCGCAGCGGTTCCTCGTG GGGTTGAAACTGCAGAAGGAAGCATAG
Upstream 100 bases:
>100_bases GCGAGGACATCCTCAAACAGGCTCTGGAAAACGGTGCCAGCGACAGCATCAAAAAGCCCTTCACCCCGGACCAGCTCAAC GAGAAGCTCGGAGGCCTCCT
Downstream 100 bases:
>100_bases ATCTCAGCAGGAGCCTCTTGATCCATGGATGGGTTTACGAATCTCACCTCCATCATCGATAACGCCCTGAAGCAGACCGC CGAAGACAGCGGCATGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: CheC Domain-Containing Protein; CheC Domain Protein; Inhibitor Of MCP Methylation CheC-Like Protein; CheC-Like Protein; Chemotaxis Protein Phosphatase CheX; Inhibitor Of MCP Methylation; Chec Domain Protein; Inhibitor Of MCP Methylation CheC N; Chemotaxis Protein; Inhibitor Of MCP Methylation CheC-Like
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MTLASGVAEATRLTEEQVAGFIIDATKEVFNTMVMMELEDQYPLQEPVTKFRCSVTGMVGLAGTYSGILSIHCPLEFALR ITSNMLGMEVDQVGEDVNDALGEIANMLGGYVKMVLSKGGMDLHLSVPTVISGEEYTLNAMADSDCVIIPFVNESQRFLV GLKLQKEA
Sequences:
>Translated_168_residues MTLASGVAEATRLTEEQVAGFIIDATKEVFNTMVMMELEDQYPLQEPVTKFRCSVTGMVGLAGTYSGILSIHCPLEFALR ITSNMLGMEVDQVGEDVNDALGEIANMLGGYVKMVLSKGGMDLHLSVPTVISGEEYTLNAMADSDCVIIPFVNESQRFLV GLKLQKEA >Mature_167_residues TLASGVAEATRLTEEQVAGFIIDATKEVFNTMVMMELEDQYPLQEPVTKFRCSVTGMVGLAGTYSGILSIHCPLEFALRI TSNMLGMEVDQVGEDVNDALGEIANMLGGYVKMVLSKGGMDLHLSVPTVISGEEYTLNAMADSDCVIIPFVNESQRFLVG LKLQKEA
Specific function: Unknown
COG id: COG1406
COG function: function code N; Predicted inhibitor of MCP methylation, homolog of CheC
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18203; Mature: 18072
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLASGVAEATRLTEEQVAGFIIDATKEVFNTMVMMELEDQYPLQEPVTKFRCSVTGMVG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHEH LAGTYSGILSIHCPLEFALRITSNMLGMEVDQVGEDVNDALGEIANMLGGYVKMVLSKGG HHCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC MDLHLSVPTVISGEEYTLNAMADSDCVIIPFVNESQRFLVGLKLQKEA CEEEEECCEEECCCCEEEEEECCCCEEEEEECCCCCEEEEEEEEECCC >Mature Secondary Structure TLASGVAEATRLTEEQVAGFIIDATKEVFNTMVMMELEDQYPLQEPVTKFRCSVTGMVG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHEH LAGTYSGILSIHCPLEFALRITSNMLGMEVDQVGEDVNDALGEIANMLGGYVKMVLSKGG HHCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC MDLHLSVPTVISGEEYTLNAMADSDCVIIPFVNESQRFLVGLKLQKEA CEEEEECCEEECCCCEEEEEECCCCEEEEEECCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA