Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78224309
Identifier: 78224309
GI number: 78224309
Start: 3515997
End: 3517094
Strand: Reverse
Name: 78224309
Synonym: Gmet_3117
Alternate gene names: NA
Gene position: 3517094-3515997 (Counterclockwise)
Preceding gene: 78224310
Following gene: 78224308
Centisome position: 87.98
GC content: 62.2
Gene sequence:
>1098_bases ATGGATGGGTTTACGAATCTCACCTCCATCATCGATAACGCCCTGAAGCAGACCGCCGAAGACAGCGGCATGCTTCTGGG GCAGGAACTCACCATCGGCGAAGCCGACATCATCGCCACGAACCGGGCCACCTACTTCTGCGACCTGGACGAGGTCTGTT TCGTGGCGGAGGTAACGGCCAGCGGTGAGTACCCCGGCACGTTCCACCTGGTTTTCGGGTTGCGGGACGCCATCTGCATG AGCGGTTTCCTCCTTGGCATCCCCTCTGCCCGCATCAACGAGAAGCGCCGCCTCGCCATCATGGAGACTGACGACGCCGA CGCCTTCTCCGAGATCATCAACCAGGCAATCGGATCGTTCAACACGGTTTTCCAGCCGGCCTTCGAGAACAAGGTTCACC TGAAGGTAGTTCCCCCCAAGAAGTTTGTCCCCGAGACCACCGAGATCACCGACACCGAACCGATTCCCGACGGCGAGTAT CTCATGTTCCGCGCCCGCATGGAGATGCCGGGGCTGGAGATGGGGAATTTTGACATCCTCATGCCGCGGGGGCTTGCCGA ACTCTTCGATCCGCCGGCGGAAGAGCCTGAACCGGTTCCCGAAGACTCAGGCAGCGACAGCGAAGAGGGGGATGAGGCGG CTGCTGCTGAGGAGGAGTTCGTCGCAACGCCGGTGGTCGCTCCTGTGGCCGAAGAGGGCGAGGCGGCGTCTGCCGTGGTG GAAAGCTGCGCCCGCAGGGTCCTCATCCTCGAAGACGACGAGACCGATCGCCAGATGGTGCGGGAACTCCTGGAAACCCG CGGGTTCGAGCTGGTGGAAGCCCGGCTCGATGCCGACATCCGTGAGATATTCTCCCAGGGGGGCGTACGGCTCGTGGTGC TCGGCATCCACAATAACGACGACCGCGACATGTCCCTTTGCATCAAGATCAAGGCCATCGCCCAGGGCGAGACCCTTCCC ATCATCATGTGCGCCCGGGAATGGACCCGCACCGCCGTGCTCAAGGCGGTCAGGTACGGCGCCCGCGACATCATCCTCAA GCCCTACCAGGAGGACGACGTGCTGGCCAAGGTGGAAAAGTTCCTGAACGCCGCATGA
Upstream 100 bases:
>100_bases CGACTGCGTCATCATTCCCTTCGTCAACGAGTCGCAGCGGTTCCTCGTGGGGTTGAAACTGCAGAAGGAAGCATAGATCT CAGCAGGAGCCTCTTGATCC
Downstream 100 bases:
>100_bases TTTTCCACCCTGGTCCCGTTTGTCAAAATTGTGACATAAACGGACCTCTTTTGACGTCACCCTTCCCCTCGCCCCTCTCT ATCGTCCCGAATCCCCCTGT
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: Response Regulator Receiver Domain-Containing Protein; Response Regulator
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MDGFTNLTSIIDNALKQTAEDSGMLLGQELTIGEADIIATNRATYFCDLDEVCFVAEVTASGEYPGTFHLVFGLRDAICM SGFLLGIPSARINEKRRLAIMETDDADAFSEIINQAIGSFNTVFQPAFENKVHLKVVPPKKFVPETTEITDTEPIPDGEY LMFRARMEMPGLEMGNFDILMPRGLAELFDPPAEEPEPVPEDSGSDSEEGDEAAAAEEEFVATPVVAPVAEEGEAASAVV ESCARRVLILEDDETDRQMVRELLETRGFELVEARLDADIREIFSQGGVRLVVLGIHNNDDRDMSLCIKIKAIAQGETLP IIMCAREWTRTAVLKAVRYGARDIILKPYQEDDVLAKVEKFLNAA
Sequences:
>Translated_365_residues MDGFTNLTSIIDNALKQTAEDSGMLLGQELTIGEADIIATNRATYFCDLDEVCFVAEVTASGEYPGTFHLVFGLRDAICM SGFLLGIPSARINEKRRLAIMETDDADAFSEIINQAIGSFNTVFQPAFENKVHLKVVPPKKFVPETTEITDTEPIPDGEY LMFRARMEMPGLEMGNFDILMPRGLAELFDPPAEEPEPVPEDSGSDSEEGDEAAAAEEEFVATPVVAPVAEEGEAASAVV ESCARRVLILEDDETDRQMVRELLETRGFELVEARLDADIREIFSQGGVRLVVLGIHNNDDRDMSLCIKIKAIAQGETLP IIMCAREWTRTAVLKAVRYGARDIILKPYQEDDVLAKVEKFLNAA >Mature_365_residues MDGFTNLTSIIDNALKQTAEDSGMLLGQELTIGEADIIATNRATYFCDLDEVCFVAEVTASGEYPGTFHLVFGLRDAICM SGFLLGIPSARINEKRRLAIMETDDADAFSEIINQAIGSFNTVFQPAFENKVHLKVVPPKKFVPETTEITDTEPIPDGEY LMFRARMEMPGLEMGNFDILMPRGLAELFDPPAEEPEPVPEDSGSDSEEGDEAAAAEEEFVATPVVAPVAEEGEAASAVV ESCARRVLILEDDETDRQMVRELLETRGFELVEARLDADIREIFSQGGVRLVVLGIHNNDDRDMSLCIKIKAIAQGETLP IIMCAREWTRTAVLKAVRYGARDIILKPYQEDDVLAKVEKFLNAA
Specific function: Unknown
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40216; Mature: 40216
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGFTNLTSIIDNALKQTAEDSGMLLGQELTIGEADIIATNRATYFCDLDEVCFVAEVTA CCCHHHHHHHHHHHHHHHHCCCCCEEECEECCCCCEEEEECCEEEEECHHHHEEEEEEEC SGEYPGTFHLVFGLRDAICMSGFLLGIPSARINEKRRLAIMETDDADAFSEIINQAIGSF CCCCCCEEEEEHHHHHHHHHHHHHHCCCCHHCCCCEEEEEEECCCHHHHHHHHHHHHCCH NTVFQPAFENKVHLKVVPPKKFVPETTEITDTEPIPDGEYLMFRARMEMPGLEMGNFDIL HHHHCCCCCCCEEEEEECCHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEE MPRGLAELFDPPAEEPEPVPEDSGSDSEEGDEAAAAEEEFVATPVVAPVAEEGEAASAVV CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHH ESCARRVLILEDDETDRQMVRELLETRGFELVEARLDADIREIFSQGGVRLVVLGIHNND HHHHCEEEEEECCCHHHHHHHHHHHHCCCEEHHHHHCHHHHHHHHCCCEEEEEEEECCCC DRDMSLCIKIKAIAQGETLPIIMCAREWTRTAVLKAVRYGARDIILKPYQEDDVLAKVEK CCCEEEEEEEEEEECCCCCEEEEECHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHH FLNAA HHCCC >Mature Secondary Structure MDGFTNLTSIIDNALKQTAEDSGMLLGQELTIGEADIIATNRATYFCDLDEVCFVAEVTA CCCHHHHHHHHHHHHHHHHCCCCCEEECEECCCCCEEEEECCEEEEECHHHHEEEEEEEC SGEYPGTFHLVFGLRDAICMSGFLLGIPSARINEKRRLAIMETDDADAFSEIINQAIGSF CCCCCCEEEEEHHHHHHHHHHHHHHCCCCHHCCCCEEEEEEECCCHHHHHHHHHHHHCCH NTVFQPAFENKVHLKVVPPKKFVPETTEITDTEPIPDGEYLMFRARMEMPGLEMGNFDIL HHHHCCCCCCCEEEEEECCHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEE MPRGLAELFDPPAEEPEPVPEDSGSDSEEGDEAAAAEEEFVATPVVAPVAEEGEAASAVV CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHH ESCARRVLILEDDETDRQMVRELLETRGFELVEARLDADIREIFSQGGVRLVVLGIHNND HHHHCEEEEEECCCHHHHHHHHHHHHCCCEEHHHHHCHHHHHHHHCCCEEEEEEEECCCC DRDMSLCIKIKAIAQGETLPIIMCAREWTRTAVLKAVRYGARDIILKPYQEDDVLAKVEK CCCEEEEEEEEEEECCCCCEEEEECHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHH FLNAA HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA