Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
---|---|
Accession | NC_007517 |
Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is folE2
Identifier: 78224266
GI number: 78224266
Start: 3472706
End: 3473491
Strand: Reverse
Name: folE2
Synonym: Gmet_3074
Alternate gene names: 78224266
Gene position: 3473491-3472706 (Counterclockwise)
Preceding gene: 78224267
Following gene: 78224265
Centisome position: 86.89
GC content: 59.41
Gene sequence:
>786_bases ATGACCACCATGCCCGACATGCAGAAAACCTCCGACACCCGGAAGATTCCCATCAACAAGGTGGGGGTGAAGGACATCTC CTACCCCATCGTGGTGATGGACAAGAACAAGAAGTTCCAGCAGACCGTGGCCCGGATCAATATGTACGTGGACCTCCCCC ACCACTTCAAGGGGACTCACATGAGCCGGTTCGTGGAGATCCTCAATGCCTACCGTGAGGATATCGCCCTGGACAAGATG GAGCCGATCCTCCAGAAGATGAAGGAGAAACTGGGGGCCTCGTCGGCCCACCTGGAGATCGAGTTTCCCTATTTCATCGA GAAGCGGGCACCGGTCTCCGGCGCCCGCAGCCTCATGGAGTACACCTGCACCTTCTGCGGTTCCCTGGGGGAAGAGTTCG ACTTCGTGCTGGGGGTGCAGATTCCGGTCACGTCCCTCTGCCCGTGCAGCAAGGAGCTGTCCCGCTACGGGGCCCATAAC CAGCGGAGCCACATCACCGTGCGCCTGCGGTACACCGACTTCATCTGGATCGAGGACTTGGTGGCGATGATCGAGGAGTG CGGGTCGAGCCCGGTCTGGTCCCTACTCAAGCGGGTGGACGAACAGTACGTCACCGAGCGGGCCTACGAGAACCCCAAGT TCGTGGAGGATATCGTGCGCGAGGTGACCCAGAAGCTCCTGGCCCACGATGCTATTACGTGGTTTTCCGTAGAGGCGGAG AACTTCGAGTCGATCCACAAGCACTCGGCCTACGCGGCCATCGAGCGTGACAAGAAAATGACATGA
Upstream 100 bases:
>100_bases ACCATCAAGAATCCAGAAGTTAGGAGTCAGGAGTCAGAATAGAAGATGCCTGGTTTTTTCTGGCTCCTGAATTCTGACTC CTGAATACCCAGAGGTTGTT
Downstream 100 bases:
>100_bases TTCATGAGGGATTGTTGTCGCCGAATTAATTTTTTTTGACGTGGAGTTCTGTGCCGCCTTGTCCCGTGGGTGTTGATAAC TATGTTGAAAAGCGCCAAAG
Product: putative GTP cyclohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MTTMPDMQKTSDTRKIPINKVGVKDISYPIVVMDKNKKFQQTVARINMYVDLPHHFKGTHMSRFVEILNAYREDIALDKM EPILQKMKEKLGASSAHLEIEFPYFIEKRAPVSGARSLMEYTCTFCGSLGEEFDFVLGVQIPVTSLCPCSKELSRYGAHN QRSHITVRLRYTDFIWIEDLVAMIEECGSSPVWSLLKRVDEQYVTERAYENPKFVEDIVREVTQKLLAHDAITWFSVEAE NFESIHKHSAYAAIERDKKMT
Sequences:
>Translated_261_residues MTTMPDMQKTSDTRKIPINKVGVKDISYPIVVMDKNKKFQQTVARINMYVDLPHHFKGTHMSRFVEILNAYREDIALDKM EPILQKMKEKLGASSAHLEIEFPYFIEKRAPVSGARSLMEYTCTFCGSLGEEFDFVLGVQIPVTSLCPCSKELSRYGAHN QRSHITVRLRYTDFIWIEDLVAMIEECGSSPVWSLLKRVDEQYVTERAYENPKFVEDIVREVTQKLLAHDAITWFSVEAE NFESIHKHSAYAAIERDKKMT >Mature_260_residues TTMPDMQKTSDTRKIPINKVGVKDISYPIVVMDKNKKFQQTVARINMYVDLPHHFKGTHMSRFVEILNAYREDIALDKME PILQKMKEKLGASSAHLEIEFPYFIEKRAPVSGARSLMEYTCTFCGSLGEEFDFVLGVQIPVTSLCPCSKELSRYGAHNQ RSHITVRLRYTDFIWIEDLVAMIEECGSSPVWSLLKRVDEQYVTERAYENPKFVEDIVREVTQKLLAHDAITWFSVEAEN FESIHKHSAYAAIERDKKMT
Specific function: Converts GTP to 7,8-dihydroneopterin triphosphate
COG id: COG1469
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase IV family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GCH4_GEOMG (Q39R36)
Other databases:
- EMBL: CP000148 - RefSeq: YP_386013.1 - ProteinModelPortal: Q39R36 - SMR: Q39R36 - STRING: Q39R36 - GeneID: 3740772 - GenomeReviews: CP000148_GR - KEGG: gme:Gmet_3074 - NMPDR: fig|269799.3.peg.3189 - eggNOG: COG1469 - HOGENOM: HBG626871 - OMA: SLMDYEV - ProtClustDB: PRK13674 - BioCyc: GMET269799:GMET_3074-MONOMER - HAMAP: MF_01527_B - InterPro: IPR022838 - InterPro: IPR003801 - InterPro: IPR002042 - Gene3D: G3DSA:3.10.270.10
Pfam domain/function: PF02649 DUF198
EC number: =3.5.4.16
Molecular weight: Translated: 30182; Mature: 30051
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTMPDMQKTSDTRKIPINKVGVKDISYPIVVMDKNKKFQQTVARINMYVDLPHHFKGTH CCCCCCCHHCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHEEECCCCCCCHH MSRFVEILNAYREDIALDKMEPILQKMKEKLGASSAHLEIEFPYFIEKRAPVSGARSLME HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCHHHHHHHHH YTCTFCGSLGEEFDFVLGVQIPVTSLCPCSKELSRYGAHNQRSHITVRLRYTDFIWIEDL HHHHHHHHCCCCCCEEEECCCCHHHCCCCHHHHHHCCCCCCCCEEEEEEEECHHHHHHHH VAMIEECGSSPVWSLLKRVDEQYVTERAYENPKFVEDIVREVTQKLLAHDAITWFSVEAE HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEECHH NFESIHKHSAYAAIERDKKMT HHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TTMPDMQKTSDTRKIPINKVGVKDISYPIVVMDKNKKFQQTVARINMYVDLPHHFKGTH CCCCCCHHCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHEEECCCCCCCHH MSRFVEILNAYREDIALDKMEPILQKMKEKLGASSAHLEIEFPYFIEKRAPVSGARSLME HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCHHHHHHHHH YTCTFCGSLGEEFDFVLGVQIPVTSLCPCSKELSRYGAHNQRSHITVRLRYTDFIWIEDL HHHHHHHHCCCCCCEEEECCCCHHHCCCCHHHHHHCCCCCCCCEEEEEEEECHHHHHHHH VAMIEECGSSPVWSLLKRVDEQYVTERAYENPKFVEDIVREVTQKLLAHDAITWFSVEAE HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEECHH NFESIHKHSAYAAIERDKKMT HHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA