Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78224265
Identifier: 78224265
GI number: 78224265
Start: 3471861
End: 3472547
Strand: Reverse
Name: 78224265
Synonym: Gmet_3073
Alternate gene names: NA
Gene position: 3472547-3471861 (Counterclockwise)
Preceding gene: 78224266
Following gene: 78224262
Centisome position: 86.87
GC content: 62.74
Gene sequence:
>687_bases ATGTCAAAAGCACTGATCGTTTTTGCCAAAAGACCGTCACCGGGCCGTGTCAAAACTCGGCTCACCCCCCCCTTTTCTCC TGAGGACGCCGCCAAGCTCTACCGTTGCATGCTTCTGGATGTCCTCGCAAAAACCGGCCAAATGACAGGTGTGGACAGAC TCCTCTTTTATGAACAGGGGGACGGTGTGCCTGAGTTCTTCGCGGAAACGGTGGGGGAGGGGGAGAGTTATCCACAGGAG GGGGACGGGTTGGGAGCGCGGTTGGCGGCGGCCTTCGACCGGACCTTTGGCCAGGGGTACGACTCGGCGGCGGTCATCGG CACCGATTCGCCCCATCTCCCGCCAGACTACATCGAACAGGCCTTTGATCTGTTGAATGATCCTCGGGTGGATGCCGTCT TCGGCCCCACGGAGGATGGCGGCTACTATCTCCTAGCCATGAAGCGGCTCCACCGGGAGCTCTTCGAGGGGATCGCCTGG TCAACGCCGGAGGTGCTGGAGCAGTCCCTGGCCCGGGCTGAGTCAGCCGGCATCGCCACGGCGCTCCTGCCGGTGTGGCA TGATGTTGACACGGCCGCCGACCTCCTGCGGCCGGAGTTGGTGGATCCGGGCAACGGCGCTCCCCTCACGAGGGAGTTCA TTTTACGACATCCACCTCATAGCCCCGTCGCCCCAGGTGGCCGATGA
Upstream 100 bases:
>100_bases TTGTCCCGTGGGTGTTGATAACTATGTTGAAAAGCGCCAAAGTTGTGGATAACGCTATGCGTTGCAGCTGCGCTCCCTTC CCCCAAACCCGCTCTGCCGT
Downstream 100 bases:
>100_bases TCTCCTGGATGTGTTCGTAGCCCCGGGTCTCCAGTTCCAGAAGGACCTCGGTCTTGCCGAGGGGAAGGTCCAGGGAGCGG CGCTCGTGGTTGATGAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MSKALIVFAKRPSPGRVKTRLTPPFSPEDAAKLYRCMLLDVLAKTGQMTGVDRLLFYEQGDGVPEFFAETVGEGESYPQE GDGLGARLAAAFDRTFGQGYDSAAVIGTDSPHLPPDYIEQAFDLLNDPRVDAVFGPTEDGGYYLLAMKRLHRELFEGIAW STPEVLEQSLARAESAGIATALLPVWHDVDTAADLLRPELVDPGNGAPLTREFILRHPPHSPVAPGGR
Sequences:
>Translated_228_residues MSKALIVFAKRPSPGRVKTRLTPPFSPEDAAKLYRCMLLDVLAKTGQMTGVDRLLFYEQGDGVPEFFAETVGEGESYPQE GDGLGARLAAAFDRTFGQGYDSAAVIGTDSPHLPPDYIEQAFDLLNDPRVDAVFGPTEDGGYYLLAMKRLHRELFEGIAW STPEVLEQSLARAESAGIATALLPVWHDVDTAADLLRPELVDPGNGAPLTREFILRHPPHSPVAPGGR >Mature_227_residues SKALIVFAKRPSPGRVKTRLTPPFSPEDAAKLYRCMLLDVLAKTGQMTGVDRLLFYEQGDGVPEFFAETVGEGESYPQEG DGLGARLAAAFDRTFGQGYDSAAVIGTDSPHLPPDYIEQAFDLLNDPRVDAVFGPTEDGGYYLLAMKRLHRELFEGIAWS TPEVLEQSLARAESAGIATALLPVWHDVDTAADLLRPELVDPGNGAPLTREFILRHPPHSPVAPGGR
Specific function: Unknown
COG id: COG3222
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24761; Mature: 24630
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKALIVFAKRPSPGRVKTRLTPPFSPEDAAKLYRCMLLDVLAKTGQMTGVDRLLFYEQG CCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECC DGVPEFFAETVGEGESYPQEGDGLGARLAAAFDRTFGQGYDSAAVIGTDSPHLPPDYIEQ CCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHH AFDLLNDPRVDAVFGPTEDGGYYLLAMKRLHRELFEGIAWSTPEVLEQSLARAESAGIAT HHHHHCCCCCCEEECCCCCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHH ALLPVWHDVDTAADLLRPELVDPGNGAPLTREFILRHPPHSPVAPGGR HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SKALIVFAKRPSPGRVKTRLTPPFSPEDAAKLYRCMLLDVLAKTGQMTGVDRLLFYEQG CCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECC DGVPEFFAETVGEGESYPQEGDGLGARLAAAFDRTFGQGYDSAAVIGTDSPHLPPDYIEQ CCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHH AFDLLNDPRVDAVFGPTEDGGYYLLAMKRLHRELFEGIAWSTPEVLEQSLARAESAGIAT HHHHHCCCCCCEEECCCCCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHH ALLPVWHDVDTAADLLRPELVDPGNGAPLTREFILRHPPHSPVAPGGR HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA