Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222612
Identifier: 78222612
GI number: 78222612
Start: 1568751
End: 1569092
Strand: Direct
Name: 78222612
Synonym: Gmet_1400
Alternate gene names: NA
Gene position: 1568751-1569092 (Clockwise)
Preceding gene: 78222611
Following gene: 78222613
Centisome position: 39.24
GC content: 45.91
Gene sequence:
>342_bases ATGAAGAAAAAGATATTTCTTACAGGCCTTTGCTTTCTGTCTATTGGTAGCGTGGCGTTTGCTGCTTCAAAAGATGTGAC TGGTTCTGGCGAGATTGGTGGGTCTAATAGTACCCCTAAGTTGGCTATCCAGACATCGAACCAGGTAACCCTTACTTATG ACGGTGGCACGGGCCATACCTATGGTATTGCCACGCTTCATGCAAAGGGCACTCGAAAGTACGCATCTACTTCCAATGAT ACAAAAATTTATTACAATGATAACACCGCTACTGCTGCTCCCTCTGCACCTGTCGGAACGGCAACTATCGGCGGCTCCAC TAACTGGAAAAATGCACTTTAA
Upstream 100 bases:
>100_bases ACTAATCTTGAATCTTATTATTCTGAACACCAATTTTATCCGAATTAATGCAAGAAGTTTCTGTTGTCTCTGATAACCGC TCAGACGAAAGGAGTTATTT
Downstream 100 bases:
>100_bases GTGCACGCTGTTCATGCTTGATACGCAAAACGAGGTGCTTATGCACCTCGTTTTGCGTTTGTTGCCAAGGATTTGTGTGG GGTGAATGATGTTGGTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MKKKIFLTGLCFLSIGSVAFAASKDVTGSGEIGGSNSTPKLAIQTSNQVTLTYDGGTGHTYGIATLHAKGTRKYASTSND TKIYYNDNTATAAPSAPVGTATIGGSTNWKNAL
Sequences:
>Translated_113_residues MKKKIFLTGLCFLSIGSVAFAASKDVTGSGEIGGSNSTPKLAIQTSNQVTLTYDGGTGHTYGIATLHAKGTRKYASTSND TKIYYNDNTATAAPSAPVGTATIGGSTNWKNAL >Mature_113_residues MKKKIFLTGLCFLSIGSVAFAASKDVTGSGEIGGSNSTPKLAIQTSNQVTLTYDGGTGHTYGIATLHAKGTRKYASTSND TKIYYNDNTATAAPSAPVGTATIGGSTNWKNAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11596; Mature: 11596
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKIFLTGLCFLSIGSVAFAASKDVTGSGEIGGSNSTPKLAIQTSNQVTLTYDGGTGHT CCCEEEEEEEEEEHHCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCE YGIATLHAKGTRKYASTSNDTKIYYNDNTATAAPSAPVGTATIGGSTNWKNAL EEEEEEECCCCEEECCCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCCC >Mature Secondary Structure MKKKIFLTGLCFLSIGSVAFAASKDVTGSGEIGGSNSTPKLAIQTSNQVTLTYDGGTGHT CCCEEEEEEEEEEHHCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCE YGIATLHAKGTRKYASTSNDTKIYYNDNTATAAPSAPVGTATIGGSTNWKNAL EEEEEEECCCCEEECCCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA