Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222613
Identifier: 78222613
GI number: 78222613
Start: 1569181
End: 1569996
Strand: Direct
Name: 78222613
Synonym: Gmet_1401
Alternate gene names: NA
Gene position: 1569181-1569996 (Clockwise)
Preceding gene: 78222612
Following gene: 78222614
Centisome position: 39.25
GC content: 47.67
Gene sequence:
>816_bases ATGTTGGTGCCGTCACATTTTTTTGTTAGTTTTCTCGGCGTGGCATGGGTCGGATTTTTCCGGGATAAAATTCTGTATGC CCTGTTCGGGGTGGCTCTGTTTCTTTTGTTGCTTGCGCCGACCCTCAGTTTCTTTTCCATGAGGCAAGTTCAGGAACTAA GCATCACGTTATCACTTTCTGCCATATCCATTTCCCTCCTTCTGCTGGCGGTTTTTCTCGGTGCAACTTCTATTTGGCGT GACATAGAAAGGCGCTATACGAGTTCTGTGCTCGGTTTGCCTGTGGCACGCTCCACGTATGTTCTCGGCAAATTCGCAGG TATCGCCATGTTTTTGCTGGTGGGTACTCTTGTTCTTGGGGCAGTGGCATTGTTGGTCATTCCCATCGCTTCGCTTCAAT ATCCATCATCCGTCCCCATCCCTTGGTTTAATATCGTTGCGGCAATCCTTGCCGATGGTTTCAAGGCGGTGTTGATTGCA GCGGTGGCTCTGCTTTTTTCCTCGTTGAGCACGTCTTTTTTTCTTCCCATATTCGGCACATTGTCGGTGTGTCTTGCTGG TAGCGCTTCTCAAGAGGTTATTGAATTTGTCCGTGGTGACTATGGCAAACAATTGGCTCCAGTCTCTCGTCTGGCCATTG AAGCAATATATTATCTTCTTCCAAACCTTAGTGCCTTTGATTTGAAGGTGCAGGCAATTTACGGCCTCCCCATTGATTTG TCCTCATTGCTTTTGACCTTCGCCTATTTTCTTGTTTACGTGGCAGTTGTGCTCTTTTTGGCAGTTTGCAGCTTCAACCG TCGGGAGTTGCTATGA
Upstream 100 bases:
>100_bases AATGCACTTTAAGTGCACGCTGTTCATGCTTGATACGCAAAACGAGGTGCTTATGCACCTCGTTTTGCGTTTGTTGCCAA GGATTTGTGTGGGGTGAATG
Downstream 100 bases:
>100_bases AGCGTGTGCTGCTGGCTCTTGTGCTGGCCGCTGCATTTTTTGTGGTAAATTTCTCCCTTGACCGACAGATGGCTAATCGG CCGGTGGTGGTCAAACTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MLVPSHFFVSFLGVAWVGFFRDKILYALFGVALFLLLLAPTLSFFSMRQVQELSITLSLSAISISLLLLAVFLGATSIWR DIERRYTSSVLGLPVARSTYVLGKFAGIAMFLLVGTLVLGAVALLVIPIASLQYPSSVPIPWFNIVAAILADGFKAVLIA AVALLFSSLSTSFFLPIFGTLSVCLAGSASQEVIEFVRGDYGKQLAPVSRLAIEAIYYLLPNLSAFDLKVQAIYGLPIDL SSLLLTFAYFLVYVAVVLFLAVCSFNRRELL
Sequences:
>Translated_271_residues MLVPSHFFVSFLGVAWVGFFRDKILYALFGVALFLLLLAPTLSFFSMRQVQELSITLSLSAISISLLLLAVFLGATSIWR DIERRYTSSVLGLPVARSTYVLGKFAGIAMFLLVGTLVLGAVALLVIPIASLQYPSSVPIPWFNIVAAILADGFKAVLIA AVALLFSSLSTSFFLPIFGTLSVCLAGSASQEVIEFVRGDYGKQLAPVSRLAIEAIYYLLPNLSAFDLKVQAIYGLPIDL SSLLLTFAYFLVYVAVVLFLAVCSFNRRELL >Mature_271_residues MLVPSHFFVSFLGVAWVGFFRDKILYALFGVALFLLLLAPTLSFFSMRQVQELSITLSLSAISISLLLLAVFLGATSIWR DIERRYTSSVLGLPVARSTYVLGKFAGIAMFLLVGTLVLGAVALLVIPIASLQYPSSVPIPWFNIVAAILADGFKAVLIA AVALLFSSLSTSFFLPIFGTLSVCLAGSASQEVIEFVRGDYGKQLAPVSRLAIEAIYYLLPNLSAFDLKVQAIYGLPIDL SSLLLTFAYFLVYVAVVLFLAVCSFNRRELL
Specific function: Unknown
COG id: COG1277
COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29472; Mature: 29472
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVPSHFFVSFLGVAWVGFFRDKILYALFGVALFLLLLAPTLSFFSMRQVQELSITLSLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AISISLLLLAVFLGATSIWRDIERRYTSSVLGLPVARSTYVLGKFAGIAMFLLVGTLVLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AVALLVIPIASLQYPSSVPIPWFNIVAAILADGFKAVLIAAVALLFSSLSTSFFLPIFGT HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LSVCLAGSASQEVIEFVRGDYGKQLAPVSRLAIEAIYYLLPNLSAFDLKVQAIYGLPIDL HHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHEEEHHHCCCCCCH SSLLLTFAYFLVYVAVVLFLAVCSFNRRELL HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure MLVPSHFFVSFLGVAWVGFFRDKILYALFGVALFLLLLAPTLSFFSMRQVQELSITLSLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AISISLLLLAVFLGATSIWRDIERRYTSSVLGLPVARSTYVLGKFAGIAMFLLVGTLVLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AVALLVIPIASLQYPSSVPIPWFNIVAAILADGFKAVLIAAVALLFSSLSTSFFLPIFGT HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LSVCLAGSASQEVIEFVRGDYGKQLAPVSRLAIEAIYYLLPNLSAFDLKVQAIYGLPIDL HHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHEEEHHHCCCCCCH SSLLLTFAYFLVYVAVVLFLAVCSFNRRELL HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA