Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is ygcG [H]
Identifier: 78222584
GI number: 78222584
Start: 1533681
End: 1534553
Strand: Direct
Name: ygcG [H]
Synonym: Gmet_1372
Alternate gene names: 78222584
Gene position: 1533681-1534553 (Clockwise)
Preceding gene: 78222583
Following gene: 78222585
Centisome position: 38.37
GC content: 65.52
Gene sequence:
>873_bases ATGATACGTCTCTTCCTTGCCATACTCATCGTTCTCCTCCCCGCGTTAGCTTCGGCTCTGGATGTGCCGCAGCTGCGGGG GTATGTGAACGACTATGCCGGCATCCTCTCCGCCGGAACGGTGCGGCAGTTGGAGGAATCCCTTGCCGGGTTCGAGCGGA GCGATTCGACCCAGATCGTGGTCCTCACGGTGCCGTCCCTGGAAGGGGATGATCTGGAAACTTTCTCCATCCGGGTTGCC GAGGCATGGCAGATCGGCCACAAGGGGAAGGACAACGGCGCCATCCTCCTGGTTGCCAAGGCGGAGCGGAAGGTTAGGAT AGAGGTGGGGCGCGGCCTCGAAGGAACCCTCACCGACCTTGTCTCGGGGCGGATCATCCGGGGCGAGATCACCCCCCGCT TCAAACAGGGGGATTTCGACGGCGGCGTCACTGCCGGCGTTACCGCCATCATGGCTGTGGTCAAGGGAGAGTATGCCGCC ACACCGCGGGATCTCCGACAGGGGAAACGGAGCGCCCCTCCTGTGGCGGCGCTCCTGTTCTTTCTCGGTGTCGCCTGCAT CTTCCTCGGGGCGCTCTCACGGGTCTTCGGAGGCATCGCCGGGGCTGCAGGGCTCCCCTTGGTGGCCTCGCTCACTTTCC CGGGTCTTGGCATTATCGTTCTCGCAGGGCTGGCGGTGGCGGGATTTCTCCTGGGCATCTTCCTGACGTTCCTCTTCGGC GGCGGGGGACGGGGAGGAGGGGGCACTTGGGGTGGTCCCTTCTACGGGGGGGGCTTTGGTGGAGGATTCGGCGGCGGATG GTCATCGGGCGGGGGAGGCTTTTCCGGGGGCGGCGGTGGCTTCGGCGGCGGCGGAGCGTCCGGTGACTGGTGA
Upstream 100 bases:
>100_bases TCACCAACAAGCTCCTGCTGCACCTGGAGCGGAAAGAACCCTTCAAGGCGGAAGAAGGGGCCAAGACGGCACCCAAAGTG AAGTTCTGACCGAGATTTGA
Downstream 100 bases:
>100_bases TCAGGGTATGAGGGGGAACGCGTGAAAAGGGCGGAGGAGTTTTTCACCCCGAAGGAGCGGGAGCGGGTAAGGGCCGCCGT GGCGGAAACCGAGAGAGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MIRLFLAILIVLLPALASALDVPQLRGYVNDYAGILSAGTVRQLEESLAGFERSDSTQIVVLTVPSLEGDDLETFSIRVA EAWQIGHKGKDNGAILLVAKAERKVRIEVGRGLEGTLTDLVSGRIIRGEITPRFKQGDFDGGVTAGVTAIMAVVKGEYAA TPRDLRQGKRSAPPVAALLFFLGVACIFLGALSRVFGGIAGAAGLPLVASLTFPGLGIIVLAGLAVAGFLLGIFLTFLFG GGGRGGGGTWGGPFYGGGFGGGFGGGWSSGGGGFSGGGGGFGGGGASGDW
Sequences:
>Translated_290_residues MIRLFLAILIVLLPALASALDVPQLRGYVNDYAGILSAGTVRQLEESLAGFERSDSTQIVVLTVPSLEGDDLETFSIRVA EAWQIGHKGKDNGAILLVAKAERKVRIEVGRGLEGTLTDLVSGRIIRGEITPRFKQGDFDGGVTAGVTAIMAVVKGEYAA TPRDLRQGKRSAPPVAALLFFLGVACIFLGALSRVFGGIAGAAGLPLVASLTFPGLGIIVLAGLAVAGFLLGIFLTFLFG GGGRGGGGTWGGPFYGGGFGGGFGGGWSSGGGGFSGGGGGFGGGGASGDW >Mature_290_residues MIRLFLAILIVLLPALASALDVPQLRGYVNDYAGILSAGTVRQLEESLAGFERSDSTQIVVLTVPSLEGDDLETFSIRVA EAWQIGHKGKDNGAILLVAKAERKVRIEVGRGLEGTLTDLVSGRIIRGEITPRFKQGDFDGGVTAGVTAIMAVVKGEYAA TPRDLRQGKRSAPPVAALLFFLGVACIFLGALSRVFGGIAGAAGLPLVASLTFPGLGIIVLAGLAVAGFLLGIFLTFLFG GGGRGGGGTWGGPFYGGGFGGGFGGGWSSGGGGFSGGGGGFGGGGASGDW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=143, Percent_Identity=32.1678321678322, Blast_Score=95, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 29291; Mature: 29291
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRLFLAILIVLLPALASALDVPQLRGYVNDYAGILSAGTVRQLEESLAGFERSDSTQIV CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE VLTVPSLEGDDLETFSIRVAEAWQIGHKGKDNGAILLVAKAERKVRIEVGRGLEGTLTDL EEEECCCCCCCCEEEEEEEHHHHHCCCCCCCCCEEEEEEECCCEEEEEECCCCCHHHHHH VSGRIIRGEITPRFKQGDFDGGVTAGVTAIMAVVKGEYAATPRDLRQGKRSAPPVAALLF HCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHH FLGVACIFLGALSRVFGGIAGAAGLPLVASLTFPGLGIIVLAGLAVAGFLLGIFLTFLFG HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GGGRGGGGTWGGPFYGGGFGGGFGGGWSSGGGGFSGGGGGFGGGGASGDW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIRLFLAILIVLLPALASALDVPQLRGYVNDYAGILSAGTVRQLEESLAGFERSDSTQIV CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE VLTVPSLEGDDLETFSIRVAEAWQIGHKGKDNGAILLVAKAERKVRIEVGRGLEGTLTDL EEEECCCCCCCCEEEEEEEHHHHHCCCCCCCCCEEEEEEECCCEEEEEECCCCCHHHHHH VSGRIIRGEITPRFKQGDFDGGVTAGVTAIMAVVKGEYAATPRDLRQGKRSAPPVAALLF HCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHH FLGVACIFLGALSRVFGGIAGAAGLPLVASLTFPGLGIIVLAGLAVAGFLLGIFLTFLFG HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GGGRGGGGTWGGPFYGGGFGGGFGGGWSSGGGGFSGGGGGFGGGGASGDW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]