Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222585
Identifier: 78222585
GI number: 78222585
Start: 1534575
End: 1535210
Strand: Direct
Name: 78222585
Synonym: Gmet_1373
Alternate gene names: NA
Gene position: 1534575-1535210 (Clockwise)
Preceding gene: 78222584
Following gene: 78222592
Centisome position: 38.39
GC content: 62.74
Gene sequence:
>636_bases GTGAAAAGGGCGGAGGAGTTTTTCACCCCGAAGGAGCGGGAGCGGGTAAGGGCCGCCGTGGCGGAAACCGAGAGAGGCAC TTCGGGGGAGATTGCCACCATGGTCGTGGACGCCAGCGACAGCTATCGTGAGGCGGAAATTCTCGGCGCGGTGCTCCTCT CCGGGCTCCTGTCGGTCATTGTTGCCGTGACGATCCACCATGTGACCATCTGGTCGTACATCCCCCTGGTTGTCCTGCTC TATTTTCCTTCCTGGTATCTCTTTCGGCGCGCCCCGCGTCTGAAGCTTCCCTTCGCGGGACGCCGCCGGCTCGCCGAGGC GGTGCGGGAGCGGGCGGTGCGGGCTTTCTACGAAAAGGGGCTCTACCGGACCCGTGAGGAAACCGGCATTCTCATCTTTA TTTCCCTACTTGAGCACAAGGTATGGATCCTTGGGGATCGGGGCATCAACAAGAAGATCGATCCGCGTTTCTGGCAGGAG TTGGCCGCTCAGCTGGCCCGGGGGCTTCGGGAGGGGCGGGCCTGCGATGTCCTCTGCTCGGTCGTTGCCGGGTGCGGCGC CGAACTGGCCAGGCATTTCCCCCACAGGGCCGACGATGTGAACGAGTTGCAGGATGAGATTCTCACCGAGCGTTAG
Upstream 100 bases:
>100_bases CGGATGGTCATCGGGCGGGGGAGGCTTTTCCGGGGGCGGCGGTGGCTTCGGCGGCGGCGGAGCGTCCGGTGACTGGTGAT CAGGGTATGAGGGGGAACGC
Downstream 100 bases:
>100_bases TGCACCCCTTCGGTTTCAGCGCCGGTTTTCTGCTTTCTGAGCAGGAGCAGAAACGGCATCACACCGAGAAACGTCAATCC CACGATCCAGAAAATACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MKRAEEFFTPKERERVRAAVAETERGTSGEIATMVVDASDSYREAEILGAVLLSGLLSVIVAVTIHHVTIWSYIPLVVLL YFPSWYLFRRAPRLKLPFAGRRRLAEAVRERAVRAFYEKGLYRTREETGILIFISLLEHKVWILGDRGINKKIDPRFWQE LAAQLARGLREGRACDVLCSVVAGCGAELARHFPHRADDVNELQDEILTER
Sequences:
>Translated_211_residues MKRAEEFFTPKERERVRAAVAETERGTSGEIATMVVDASDSYREAEILGAVLLSGLLSVIVAVTIHHVTIWSYIPLVVLL YFPSWYLFRRAPRLKLPFAGRRRLAEAVRERAVRAFYEKGLYRTREETGILIFISLLEHKVWILGDRGINKKIDPRFWQE LAAQLARGLREGRACDVLCSVVAGCGAELARHFPHRADDVNELQDEILTER >Mature_211_residues MKRAEEFFTPKERERVRAAVAETERGTSGEIATMVVDASDSYREAEILGAVLLSGLLSVIVAVTIHHVTIWSYIPLVVLL YFPSWYLFRRAPRLKLPFAGRRRLAEAVRERAVRAFYEKGLYRTREETGILIFISLLEHKVWILGDRGINKKIDPRFWQE LAAQLARGLREGRACDVLCSVVAGCGAELARHFPHRADDVNELQDEILTER
Specific function: Unknown
COG id: COG3762
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24092; Mature: 24092
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRAEEFFTPKERERVRAAVAETERGTSGEIATMVVDASDSYREAEILGAVLLSGLLSVI CCCCHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHH VAVTIHHVTIWSYIPLVVLLYFPSWYLFRRAPRLKLPFAGRRRLAEAVRERAVRAFYEKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LYRTREETGILIFISLLEHKVWILGDRGINKKIDPRFWQELAAQLARGLREGRACDVLCS HHHHHHHCCHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH VVAGCGAELARHFPHRADDVNELQDEILTER HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MKRAEEFFTPKERERVRAAVAETERGTSGEIATMVVDASDSYREAEILGAVLLSGLLSVI CCCCHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHH VAVTIHHVTIWSYIPLVVLLYFPSWYLFRRAPRLKLPFAGRRRLAEAVRERAVRAFYEKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LYRTREETGILIFISLLEHKVWILGDRGINKKIDPRFWQELAAQLARGLREGRACDVLCS HHHHHHHCCHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH VVAGCGAELARHFPHRADDVNELQDEILTER HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA