Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is wzxE [H]
Identifier: 78222539
GI number: 78222539
Start: 1482351
End: 1483619
Strand: Direct
Name: wzxE [H]
Synonym: Gmet_1326
Alternate gene names: 78222539
Gene position: 1482351-1483619 (Clockwise)
Preceding gene: 78222538
Following gene: 78222540
Centisome position: 37.08
GC content: 40.9
Gene sequence:
>1269_bases TTGAATCTCATCAAAACAAGTCTGCTCAATGGTATTGCTGTTGTAATTAGATTGTTTACTTCTATTGGCCTGAACAAGGT TCTTGCATTATATGTGGGGCCTGCAGGTTATGCAGTTATCGGTCAATTCCAGAATGCTATGGGCATGTTAACCTCCTTCG CCAGTGCTGGAATAACTACCGGTGTAACCAAGTATACTGCCGAATATTTTGATGATGAGGAGCAGCAGCACACAGTATGG CGCACTGCAGGAACTATAGTTTTCTGCGGTTCATTGTTTGCCTCACTCGGCATTGCACTTTTTCACCGTTCACTAGCCCG AATGTTTCTTAAGGATGAAGCCTACGCAGGTGTATTCCTCTGGCTGGCTGCTACGCTGATTCTTATGGTTTTTAATGGGC TTCTTTTAGCTATTTTGAACGGTAAGAAAGATATTCGCCGTTATGTAACGGTAAATATTACTGGAAGCTTGGTATCGTTG ATAGTAACTGGCATCTTGGCCAAAGTTTGGGGATTGTATGGCGCGCTGGTTGCCTTAGCCATCAATCAGTCAATTGTTTT TATAGTCACGTTTGCAATGTGCCAACGAGCGGCTTGGTTTCGTGTTGCCCATATCATCGGTCCTATAGACCTGATAGCAG CACGTAACTTGGGCAAATTCATGCTCATGGCGCTTACCACTGCTGCTGTTGGCCCAACGAGCCAAATCATCGTTCGGGAT CATCTGGCAACAAAATTCGGTTGGACAAGTGCAGGCCACTGGCAGGCAGTAACAAAAATTAGCGATATTTATTTGATGCT TATAACAACAACTCTTAGTGTTTATTATCTCCCGAAGCTGTCTGAGATCAGAGATATTACAGAGATAAAGAAAGAAATCC TGCGAGGATATAAACTTATTCTTCCTCTTACTGTAAGTGGGGCTAGTATTATTTATTTATTACGAGACTGGATAGTTGAA ATATTGTTTACAAAAGACTTTTATCCAATGACTGAGTTGTTTGCATGGCAACTTTCCGGGGATGTTGTTAAAATTTGCAG TTGGTTGCTGGCTTATGTAATGTTAGGCCGGGCTTTGGTGAGAACCTTTATTTTTACTGAGATTCTATTCGGCACTACAT TTATTGGGTTTACTTTTGTTTTTACGAAATATGTTGGGCTAAAAGGTGCAACTGTAGGGTATTTTATCAATTATGTTGTG TACTGGATTACCATGATATATTTAATACCAAAGTTCATAAATGGACGAAGGCACATATCAGCAATTTGA
Upstream 100 bases:
>100_bases AAAACATTCATGTTGAGGTGCTTAGCCTTCCAATGGGACCGTCGATGTCAAAAGCACAAGCGGAATTTGTTATAAAAACA ATGAATCGGATTTTAATACC
Downstream 100 bases:
>100_bases CGGTATATTGGTCGTAAACACATGAGAGATACGGTAATAATATTTTGTAAATGTATGAATATGGGAGGGACAGAAACCCT GACCATTCGTCTATTAAATT
Product: lipopolysaccharide biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MNLIKTSLLNGIAVVIRLFTSIGLNKVLALYVGPAGYAVIGQFQNAMGMLTSFASAGITTGVTKYTAEYFDDEEQQHTVW RTAGTIVFCGSLFASLGIALFHRSLARMFLKDEAYAGVFLWLAATLILMVFNGLLLAILNGKKDIRRYVTVNITGSLVSL IVTGILAKVWGLYGALVALAINQSIVFIVTFAMCQRAAWFRVAHIIGPIDLIAARNLGKFMLMALTTAAVGPTSQIIVRD HLATKFGWTSAGHWQAVTKISDIYLMLITTTLSVYYLPKLSEIRDITEIKKEILRGYKLILPLTVSGASIIYLLRDWIVE ILFTKDFYPMTELFAWQLSGDVVKICSWLLAYVMLGRALVRTFIFTEILFGTTFIGFTFVFTKYVGLKGATVGYFINYVV YWITMIYLIPKFINGRRHISAI
Sequences:
>Translated_422_residues MNLIKTSLLNGIAVVIRLFTSIGLNKVLALYVGPAGYAVIGQFQNAMGMLTSFASAGITTGVTKYTAEYFDDEEQQHTVW RTAGTIVFCGSLFASLGIALFHRSLARMFLKDEAYAGVFLWLAATLILMVFNGLLLAILNGKKDIRRYVTVNITGSLVSL IVTGILAKVWGLYGALVALAINQSIVFIVTFAMCQRAAWFRVAHIIGPIDLIAARNLGKFMLMALTTAAVGPTSQIIVRD HLATKFGWTSAGHWQAVTKISDIYLMLITTTLSVYYLPKLSEIRDITEIKKEILRGYKLILPLTVSGASIIYLLRDWIVE ILFTKDFYPMTELFAWQLSGDVVKICSWLLAYVMLGRALVRTFIFTEILFGTTFIGFTFVFTKYVGLKGATVGYFINYVV YWITMIYLIPKFINGRRHISAI >Mature_422_residues MNLIKTSLLNGIAVVIRLFTSIGLNKVLALYVGPAGYAVIGQFQNAMGMLTSFASAGITTGVTKYTAEYFDDEEQQHTVW RTAGTIVFCGSLFASLGIALFHRSLARMFLKDEAYAGVFLWLAATLILMVFNGLLLAILNGKKDIRRYVTVNITGSLVSL IVTGILAKVWGLYGALVALAINQSIVFIVTFAMCQRAAWFRVAHIIGPIDLIAARNLGKFMLMALTTAAVGPTSQIIVRD HLATKFGWTSAGHWQAVTKISDIYLMLITTTLSVYYLPKLSEIRDITEIKKEILRGYKLILPLTVSGASIIYLLRDWIVE ILFTKDFYPMTELFAWQLSGDVVKICSWLLAYVMLGRALVRTFIFTEILFGTTFIGFTFVFTKYVGLKGATVGYFINYVV YWITMIYLIPKFINGRRHISAI
Specific function: Synthesis of enterobacterial common antigen (ECA). [C]
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790227, Length=401, Percent_Identity=31.1720698254364, Blast_Score=200, Evalue=1e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002797 [H]
Pfam domain/function: PF01943 Polysacc_synt [H]
EC number: NA
Molecular weight: Translated: 47007; Mature: 47007
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLIKTSLLNGIAVVIRLFTSIGLNKVLALYVGPAGYAVIGQFQNAMGMLTSFASAGITT CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHCCCHH GVTKYTAEYFDDEEQQHTVWRTAGTIVFCGSLFASLGIALFHRSLARMFLKDEAYAGVFL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLAATLILMVFNGLLLAILNGKKDIRRYVTVNITGSLVSLIVTGILAKVWGLYGALVALA HHHHHHHHHHHHHHHHHHHCCHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH INQSIVFIVTFAMCQRAAWFRVAHIIGPIDLIAARNLGKFMLMALTTAAVGPTSQIIVRD HCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHH HLATKFGWTSAGHWQAVTKISDIYLMLITTTLSVYYLPKLSEIRDITEIKKEILRGYKLI HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEE LPLTVSGASIIYLLRDWIVEILFTKDFYPMTELFAWQLSGDVVKICSWLLAYVMLGRALV EEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH RTFIFTEILFGTTFIGFTFVFTKYVGLKGATVGYFINYVVYWITMIYLIPKFINGRRHIS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCC AI CC >Mature Secondary Structure MNLIKTSLLNGIAVVIRLFTSIGLNKVLALYVGPAGYAVIGQFQNAMGMLTSFASAGITT CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHCCCHH GVTKYTAEYFDDEEQQHTVWRTAGTIVFCGSLFASLGIALFHRSLARMFLKDEAYAGVFL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLAATLILMVFNGLLLAILNGKKDIRRYVTVNITGSLVSLIVTGILAKVWGLYGALVALA HHHHHHHHHHHHHHHHHHHCCHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH INQSIVFIVTFAMCQRAAWFRVAHIIGPIDLIAARNLGKFMLMALTTAAVGPTSQIIVRD HCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHH HLATKFGWTSAGHWQAVTKISDIYLMLITTTLSVYYLPKLSEIRDITEIKKEILRGYKLI HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEE LPLTVSGASIIYLLRDWIVEILFTKDFYPMTELFAWQLSGDVVKICSWLLAYVMLGRALV EEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH RTFIFTEILFGTTFIGFTFVFTKYVGLKGATVGYFINYVVYWITMIYLIPKFINGRRHIS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCC AI CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1379743; 9278503 [H]