Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222540
Identifier: 78222540
GI number: 78222540
Start: 1483641
End: 1484876
Strand: Direct
Name: 78222540
Synonym: Gmet_1327
Alternate gene names: NA
Gene position: 1483641-1484876 (Clockwise)
Preceding gene: 78222539
Following gene: 78222541
Centisome position: 37.11
GC content: 29.21
Gene sequence:
>1236_bases ATGAGAGATACGGTAATAATATTTTGTAAATGTATGAATATGGGAGGGACAGAAACCCTGACCATTCGTCTATTAAATTG GTATAGACAAAATAATTACAGATCAATACTTCTTACATTAGACGAAATAACAAGCATGACATTGCTAGAAGATATAAAAA AAATTAATATAGAACATTATGTTTATAATCACAATAAAAGAGAATTTTATTCGTGCAAATCTAACAAATTGACATTTAAT TCAAAAGACAATTGTTTGATAATAACTCATTTTATGCCAGAGTTTTTTGAATGTTTTTCTATGTTAACAGAATCAAAATA TAGTTGTAAATTTAGACACACTATCTACATTGTACATCCGTATTCCACTTATATGGTTAGTAAGAAAATTGCTTTTATTG GGAAAGGATTGATAGACTATTTGTTGAAAAAAAATGTTATAGTTTTTATGGATGAAACTTGCATTGAAAAATGTGTGAAT TATTACGGACTGATACCTGAAGAGTATGATCTAACAGTACTCAGGCTTCCCATATCAGTGAACTGTGAAAATATAATTGC AAATAGAAATAAAATATTTAATATATTAACTGTTTCACGATTCGAATTCCCTTTTAAGGGTTATGTTATCGGGTTGATAA AATCATTTGAAAAACTCTATACCGTTAACAATAACATATCATTAACAATCATTGGTTATGGGGAGGGAAAGGATTCTGTG CTTAGGGCAATCCGTGACATGCAGCCAGTGGTTGCAGAAAAAATTAGTGTTATAGACCAAGTCCCTTATAGTAAGTTGAA TGAATATATTTTGAAATCTGACGTTTTTGTGGGTATGGGTACAACCATTCTTGATGCTGCTCAGATGAGTAAAATTTGCA TAGTTGCTATTGCATACCAAATGTCTGATCATGCAGCTGGCTTTCTCCATGATAATTATAAAAACATTGGAGAGATATAC GATAAAAGTAATAATTACCCCTCTATTTATAACTTATTGAATAAAGCACTAGATTTCAATAATGATGAATTTAAATATTA TTCTGATTACACGTATAGAATAATAAAGGAATGCTATAATATTGATGTCATAGCGCCAAAACTATGGCAAAACACTTCAT ATTTATTTACAATAAATGCATATTTACTTGTCAAATTATTAGCAGCGTTAAATGTCCTAATTACGCTTATAGCTAAGAAG TTTATTAAACGTGAATATAATGCGAATGGTAATTAA
Upstream 100 bases:
>100_bases TTATGTTGTGTACTGGATTACCATGATATATTTAATACCAAAGTTCATAAATGGACGAAGGCACATATCAGCAATTTGAC GGTATATTGGTCGTAAACAC
Downstream 100 bases:
>100_bases TGTCGGTTTATGATATTGGCATTTATAACTGCTCATTTCTGAATTAAGTAGTTTTAAATTACATATTTTGAACGATTTGC ATACCTTTTTTTCATCAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MRDTVIIFCKCMNMGGTETLTIRLLNWYRQNNYRSILLTLDEITSMTLLEDIKKINIEHYVYNHNKREFYSCKSNKLTFN SKDNCLIITHFMPEFFECFSMLTESKYSCKFRHTIYIVHPYSTYMVSKKIAFIGKGLIDYLLKKNVIVFMDETCIEKCVN YYGLIPEEYDLTVLRLPISVNCENIIANRNKIFNILTVSRFEFPFKGYVIGLIKSFEKLYTVNNNISLTIIGYGEGKDSV LRAIRDMQPVVAEKISVIDQVPYSKLNEYILKSDVFVGMGTTILDAAQMSKICIVAIAYQMSDHAAGFLHDNYKNIGEIY DKSNNYPSIYNLLNKALDFNNDEFKYYSDYTYRIIKECYNIDVIAPKLWQNTSYLFTINAYLLVKLLAALNVLITLIAKK FIKREYNANGN
Sequences:
>Translated_411_residues MRDTVIIFCKCMNMGGTETLTIRLLNWYRQNNYRSILLTLDEITSMTLLEDIKKINIEHYVYNHNKREFYSCKSNKLTFN SKDNCLIITHFMPEFFECFSMLTESKYSCKFRHTIYIVHPYSTYMVSKKIAFIGKGLIDYLLKKNVIVFMDETCIEKCVN YYGLIPEEYDLTVLRLPISVNCENIIANRNKIFNILTVSRFEFPFKGYVIGLIKSFEKLYTVNNNISLTIIGYGEGKDSV LRAIRDMQPVVAEKISVIDQVPYSKLNEYILKSDVFVGMGTTILDAAQMSKICIVAIAYQMSDHAAGFLHDNYKNIGEIY DKSNNYPSIYNLLNKALDFNNDEFKYYSDYTYRIIKECYNIDVIAPKLWQNTSYLFTINAYLLVKLLAALNVLITLIAKK FIKREYNANGN >Mature_411_residues MRDTVIIFCKCMNMGGTETLTIRLLNWYRQNNYRSILLTLDEITSMTLLEDIKKINIEHYVYNHNKREFYSCKSNKLTFN SKDNCLIITHFMPEFFECFSMLTESKYSCKFRHTIYIVHPYSTYMVSKKIAFIGKGLIDYLLKKNVIVFMDETCIEKCVN YYGLIPEEYDLTVLRLPISVNCENIIANRNKIFNILTVSRFEFPFKGYVIGLIKSFEKLYTVNNNISLTIIGYGEGKDSV LRAIRDMQPVVAEKISVIDQVPYSKLNEYILKSDVFVGMGTTILDAAQMSKICIVAIAYQMSDHAAGFLHDNYKNIGEIY DKSNNYPSIYNLLNKALDFNNDEFKYYSDYTYRIIKECYNIDVIAPKLWQNTSYLFTINAYLLVKLLAALNVLITLIAKK FIKREYNANGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47866; Mature: 47866
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDTVIIFCKCMNMGGTETLTIRLLNWYRQNNYRSILLTLDEITSMTLLEDIKKINIEHY CCCEEEEEEEECCCCCCCEEEEEEEHHHHCCCCEEEEEEHHHHHHHHHHHHHHHCCEEEE VYNHNKREFYSCKSNKLTFNSKDNCLIITHFMPEFFECFSMLTESKYSCKFRHTIYIVHP EEECCCCCEEECCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEC YSTYMVSKKIAFIGKGLIDYLLKKNVIVFMDETCIEKCVNYYGLIPEEYDLTVLRLPISV CHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHCCCCCCCCEEEEEEEEEC NCENIIANRNKIFNILTVSRFEFPFKGYVIGLIKSFEKLYTVNNNISLTIIGYGEGKDSV CHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHEEECCCEEEEEEEECCCHHHH LRAIRDMQPVVAEKISVIDQVPYSKLNEYILKSDVFVGMGTTILDAAQMSKICIVAIAYQ HHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCEEEECCHHHHHHHHHCCEEEEEEEEH MSDHAAGFLHDNYKNIGEIYDKSNNYPSIYNLLNKALDFNNDEFKYYSDYTYRIIKECYN HCCCCCCHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHC IDVIAPKLWQNTSYLFTINAYLLVKLLAALNVLITLIAKKFIKREYNANGN CCEECHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRDTVIIFCKCMNMGGTETLTIRLLNWYRQNNYRSILLTLDEITSMTLLEDIKKINIEHY CCCEEEEEEEECCCCCCCEEEEEEEHHHHCCCCEEEEEEHHHHHHHHHHHHHHHCCEEEE VYNHNKREFYSCKSNKLTFNSKDNCLIITHFMPEFFECFSMLTESKYSCKFRHTIYIVHP EEECCCCCEEECCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEC YSTYMVSKKIAFIGKGLIDYLLKKNVIVFMDETCIEKCVNYYGLIPEEYDLTVLRLPISV CHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHCCCCCCCCEEEEEEEEEC NCENIIANRNKIFNILTVSRFEFPFKGYVIGLIKSFEKLYTVNNNISLTIIGYGEGKDSV CHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHEEECCCEEEEEEEECCCHHHH LRAIRDMQPVVAEKISVIDQVPYSKLNEYILKSDVFVGMGTTILDAAQMSKICIVAIAYQ HHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCEEEECCHHHHHHHHHCCEEEEEEEEH MSDHAAGFLHDNYKNIGEIYDKSNNYPSIYNLLNKALDFNNDEFKYYSDYTYRIIKECYN HCCCCCCHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHC IDVIAPKLWQNTSYLFTINAYLLVKLLAALNVLITLIAKKFIKREYNANGN CCEECHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA