Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
---|---|
Accession | NC_007517 |
Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78222528
Identifier: 78222528
GI number: 78222528
Start: 1475490
End: 1475918
Strand: Direct
Name: 78222528
Synonym: Gmet_1314
Alternate gene names: NA
Gene position: 1475490-1475918 (Clockwise)
Preceding gene: 78222527
Following gene: 78222530
Centisome position: 36.91
GC content: 52.21
Gene sequence:
>429_bases ATGCGGCTTGACCTGTACCAGGCTGAAACGGCATATATCGCCCAGGAACAAACGGCGCTGCTGGATGAGGCCCGTGCTAT TTTGCTTTCTGAAAGGCCCCTGTCACGTCTTGAAGAGAACGGTGTACTCCATGCCATACAGGTGCTTGTAGAGAATGCCA TCGGCAAGGCAAAGCAGTTGCTCAAGGCAAGCGGAAAGCAGGTGCCTGTATCGGCATATGACAGCTTTCATGCCCTGGCT GACCTGGGGGTGATCAAGGTCAGCTCCCTTGCTGCGTGGAATGCCACCATAGGATTGCGTAACCGGCTAGTCCATGACTA CATGAATATCGACATGGGCCGGATTTTAGAACTTGTCAGAAATGAACAGTACCGGTTTGTGACGGAGTTCCTCATGTCGC CTGTGCAGGAAGTGAGTGATAAAGCGTAA
Upstream 100 bases:
>100_bases GAAGAGGGGATCCCTCTTAAAGGGGAAGACGGACTTCCCTGGCAGCATTTTCTCCGACGAACCTGGCGCGATCTTGAAGA TTACTACTGGGAGCAGACCT
Downstream 100 bases:
>100_bases ACGCTTTTGCGAGAATGAGAGAATTTCCTATTTTGGATCACTACTGTCCGGTTAATAGTTGAATAAGTTCAGTTGGTTGC GCTCAGGATAATCAGCATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MRLDLYQAETAYIAQEQTALLDEARAILLSERPLSRLEENGVLHAIQVLVENAIGKAKQLLKASGKQVPVSAYDSFHALA DLGVIKVSSLAAWNATIGLRNRLVHDYMNIDMGRILELVRNEQYRFVTEFLMSPVQEVSDKA
Sequences:
>Translated_142_residues MRLDLYQAETAYIAQEQTALLDEARAILLSERPLSRLEENGVLHAIQVLVENAIGKAKQLLKASGKQVPVSAYDSFHALA DLGVIKVSSLAAWNATIGLRNRLVHDYMNIDMGRILELVRNEQYRFVTEFLMSPVQEVSDKA >Mature_142_residues MRLDLYQAETAYIAQEQTALLDEARAILLSERPLSRLEENGVLHAIQVLVENAIGKAKQLLKASGKQVPVSAYDSFHALA DLGVIKVSSLAAWNATIGLRNRLVHDYMNIDMGRILELVRNEQYRFVTEFLMSPVQEVSDKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15897; Mature: 15897
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLDLYQAETAYIAQEQTALLDEARAILLSERPLSRLEENGVLHAIQVLVENAIGKAKQL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHH LKASGKQVPVSAYDSFHALADLGVIKVSSLAAWNATIGLRNRLVHDYMNIDMGRILELVR HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH NEQYRFVTEFLMSPVQEVSDKA CCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRLDLYQAETAYIAQEQTALLDEARAILLSERPLSRLEENGVLHAIQVLVENAIGKAKQL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHH LKASGKQVPVSAYDSFHALADLGVIKVSSLAAWNATIGLRNRLVHDYMNIDMGRILELVR HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH NEQYRFVTEFLMSPVQEVSDKA CCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA