Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222530
Identifier: 78222530
GI number: 78222530
Start: 1477315
End: 1477761
Strand: Direct
Name: 78222530
Synonym: Gmet_1316
Alternate gene names: NA
Gene position: 1477315-1477761 (Clockwise)
Preceding gene: 78222528
Following gene: 78222531
Centisome position: 36.96
GC content: 46.98
Gene sequence:
>447_bases GTGGTATGTGGAAAATGTGAGCAAGGATTCCCGCCGGTCAACTTGATGGATTGCGATATGGAACAGTTGAAGACTGAGCT TGCACCGATTTTCGCAAAATACCATGACGAGATTGTCGCCGCCTATCTTTTCGGTTCGACTGCCAGTGGGCTGACATCCT CTTTAAGCGATATTGATATTGCAGTGTTGCCGCGCAACACGGATAAAGTGAGTGGAGCAACACTGAAATTTCATCTATAC GCAGACCTGTGCCGAAAACTGAACAGAAACGATATCGATTTGATGATGATGGGGCTTTCAGGCAATCTTATCTTGAATGA TGAGATTCTCCGGAATGGGAAACTTCTCTACGTGACCGACCATGATGCCCGAGACGACTTTGAGCTCAAGGTTCTCCATA GGTGCACGGATTTCAAATTTCAGCGTCGATACGCCATGGGGGTTTAG
Upstream 100 bases:
>100_bases AGCAATAAAGTTCAACAAGTTACAGCTGTACAATCAAAGTTTACCGGACAGTAGTAATTTTGGATAACGATTCGGTCAGA AGGATAGGGCGGACGTATCA
Downstream 100 bases:
>100_bases TGGAGCGCATACGGCAGAAGATAGGAAGAATCAACGAACATCTTTCTATAATTCGCGCAATCAAGGATGATTGCAGTCGC AAATTTGCTGTTGATCCGAT
Product: nucleotidyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MVCGKCEQGFPPVNLMDCDMEQLKTELAPIFAKYHDEIVAAYLFGSTASGLTSSLSDIDIAVLPRNTDKVSGATLKFHLY ADLCRKLNRNDIDLMMMGLSGNLILNDEILRNGKLLYVTDHDARDDFELKVLHRCTDFKFQRRYAMGV
Sequences:
>Translated_148_residues MVCGKCEQGFPPVNLMDCDMEQLKTELAPIFAKYHDEIVAAYLFGSTASGLTSSLSDIDIAVLPRNTDKVSGATLKFHLY ADLCRKLNRNDIDLMMMGLSGNLILNDEILRNGKLLYVTDHDARDDFELKVLHRCTDFKFQRRYAMGV >Mature_148_residues MVCGKCEQGFPPVNLMDCDMEQLKTELAPIFAKYHDEIVAAYLFGSTASGLTSSLSDIDIAVLPRNTDKVSGATLKFHLY ADLCRKLNRNDIDLMMMGLSGNLILNDEILRNGKLLYVTDHDARDDFELKVLHRCTDFKFQRRYAMGV
Specific function: Unknown
COG id: COG1708
COG function: function code R; Predicted nucleotidyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16713; Mature: 16713
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVCGKCEQGFPPVNLMDCDMEQLKTELAPIFAKYHDEIVAAYLFGSTASGLTSSLSDIDI CCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEE AVLPRNTDKVSGATLKFHLYADLCRKLNRNDIDLMMMGLSGNLILNDEILRNGKLLYVTD EEECCCCCCCCCEEEEEEEHHHHHHHCCCCCEEEEEECCCCCEEECHHHHHCCCEEEEEC HDARDDFELKVLHRCTDFKFQRRYAMGV CCCCCCHHHHEEHHHCCCHHHHHHHCCC >Mature Secondary Structure MVCGKCEQGFPPVNLMDCDMEQLKTELAPIFAKYHDEIVAAYLFGSTASGLTSSLSDIDI CCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEE AVLPRNTDKVSGATLKFHLYADLCRKLNRNDIDLMMMGLSGNLILNDEILRNGKLLYVTD EEECCCCCCCCCEEEEEEEHHHHHHHCCCCCEEEEEECCCCCEEECHHHHHCCCEEEEEC HDARDDFELKVLHRCTDFKFQRRYAMGV CCCCCCHHHHEEHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA