Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is vorB [H]
Identifier: 78222521
GI number: 78222521
Start: 1468719
End: 1469777
Strand: Direct
Name: vorB [H]
Synonym: Gmet_1307
Alternate gene names: 78222521
Gene position: 1468719-1469777 (Clockwise)
Preceding gene: 78222520
Following gene: 78222522
Centisome position: 36.74
GC content: 61.95
Gene sequence:
>1059_bases TTGACAAAGCGTCTGTTCATGAAAGGGAACGAAGCCCTTGCCATGGCCGCCATTGAGGCCGGGTGCCGCTACTACTTCGG CTATCCCATCACTCCCCAGAGCGATATCCCCGAATACATGTCGCGGGAACTCCCCAAGCTTGGCGGCGAATTCATCCAGG CCGAGAGCGAGGTCGCTTCCATCAACATGCTTCTCGGCGCCTCGGCCACCGGCGTGCGGGCCATGACCTCGTCATCCAGT CCCGGCATTTCCCTGAAACAGGAGGGGATTTCCTATATGGCCGGCGCGGAGTTGCCCGGGGTGATCGTCAACATCTGCCG GTCGGGCCCGGGGCTCGGCGGCATCGACGCCTCCCAGGCCGACTACTTTCAAGCGGTCAAGGGGGGAGGGCATGGCGGCT ATCACATCATCGTCCTTGCCCCGGCGTCGGTCCAGGAGATGTATGACCTGACGATGCTCGCCTTTGACCTCGCCGACCTC TACCGGATGCCGTCGATGATCCTCGGCGATTCCGTTGTCGGCCAGATGAAGGAGTCGGTCATTCCCAATAAACGCCCCGA GCGGAACCTCCCCCCTAAGGACTGGGTCGTCCGCGGCAAGGGGGACGGCGAACAGCGGGTCGTGAAGTCGCTCTATTTGG GGGACGGCGAGTTGGAGGCCCACAACTGGAAGCTTCACGCCCGGTACGGGGAGCTGAAAGCAAAAGAAGCCCGGTGGGAA GAATTCATGCTCGATGATGCCGAGCTCGTTGTCACGGCCTTCGGTTCGGCCGCCCGTATCGCCAAGAGTGCCGTCATGGC CGCCCGCGACAAGGGCCTCAAGGTGGGGTTGCTGCGTCCGATAACCCTTTACCCCTTTCCGGAGAAAGCCTTCCTCGCCG CAACGGAGCGGTGCAAGAAAGTGCTCGACATCGAGCTCAACGCCGGCCAGATGGTGGAGGACGTCCGTCTCTCCGTAGCC CGCGACGCAGAGGTCTTCTTCTACGGCAGGCCCCCGGGGGCTGGTTCTCTCCCTACTCCTGAGGAGTTGCTGGAACAGAT CACTAACTATTACGTCTAG
Upstream 100 bases:
>100_bases GATACCGGGCTAATTGTTCGCATACGCCTGCAGCGAAGTTTGATTTGTCCTGAAAGGTTTCTGTCAGACCGTTTTTTCTG ATTCATTCACGGAGGTTGCT
Downstream 100 bases:
>100_bases GGGGGATCACCGGGGATGATTTGATTGATGGTTTTTTACCGGTCCCCGGTTCCTGATCCCCGATCCCGAGGTTTTTAATG CAACAGGTCTTCAAAAAACC
Product: 2-ketoisovalerate ferredoxin reductase
Products: NA
Alternate protein names: VOR; 2-oxoisovalerate ferredoxin reductase subunit beta; 2-oxoisovalerate oxidoreductase beta chain [H]
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MTKRLFMKGNEALAMAAIEAGCRYYFGYPITPQSDIPEYMSRELPKLGGEFIQAESEVASINMLLGASATGVRAMTSSSS PGISLKQEGISYMAGAELPGVIVNICRSGPGLGGIDASQADYFQAVKGGGHGGYHIIVLAPASVQEMYDLTMLAFDLADL YRMPSMILGDSVVGQMKESVIPNKRPERNLPPKDWVVRGKGDGEQRVVKSLYLGDGELEAHNWKLHARYGELKAKEARWE EFMLDDAELVVTAFGSAARIAKSAVMAARDKGLKVGLLRPITLYPFPEKAFLAATERCKKVLDIELNAGQMVEDVRLSVA RDAEVFFYGRPPGAGSLPTPEELLEQITNYYV
Sequences:
>Translated_352_residues MTKRLFMKGNEALAMAAIEAGCRYYFGYPITPQSDIPEYMSRELPKLGGEFIQAESEVASINMLLGASATGVRAMTSSSS PGISLKQEGISYMAGAELPGVIVNICRSGPGLGGIDASQADYFQAVKGGGHGGYHIIVLAPASVQEMYDLTMLAFDLADL YRMPSMILGDSVVGQMKESVIPNKRPERNLPPKDWVVRGKGDGEQRVVKSLYLGDGELEAHNWKLHARYGELKAKEARWE EFMLDDAELVVTAFGSAARIAKSAVMAARDKGLKVGLLRPITLYPFPEKAFLAATERCKKVLDIELNAGQMVEDVRLSVA RDAEVFFYGRPPGAGSLPTPEELLEQITNYYV >Mature_351_residues TKRLFMKGNEALAMAAIEAGCRYYFGYPITPQSDIPEYMSRELPKLGGEFIQAESEVASINMLLGASATGVRAMTSSSSP GISLKQEGISYMAGAELPGVIVNICRSGPGLGGIDASQADYFQAVKGGGHGGYHIIVLAPASVQEMYDLTMLAFDLADLY RMPSMILGDSVVGQMKESVIPNKRPERNLPPKDWVVRGKGDGEQRVVKSLYLGDGELEAHNWKLHARYGELKAKEARWEE FMLDDAELVVTAFGSAARIAKSAVMAARDKGLKVGLLRPITLYPFPEKAFLAATERCKKVLDIELNAGQMVEDVRLSVAR DAEVFFYGRPPGAGSLPTPEELLEQITNYYV
Specific function: Unknown
COG id: COG0674
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002880 - InterPro: IPR009014 - InterPro: IPR015941 [H]
Pfam domain/function: PF01855 POR_N [H]
EC number: =1.2.7.7 [H]
Molecular weight: Translated: 38354; Mature: 38222
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKRLFMKGNEALAMAAIEAGCRYYFGYPITPQSDIPEYMSRELPKLGGEFIQAESEVAS CCCEEEECCCCHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHH INMLLGASATGVRAMTSSSSPGISLKQEGISYMAGAELPGVIVNICRSGPGLGGIDASQA EEHEECCCCCCCEEEECCCCCCCEEHHHCCHHHCCCCCCHHHHHHHHCCCCCCCCCCCHH DYFQAVKGGGHGGYHIIVLAPASVQEMYDLTMLAFDLADLYRMPSMILGDSVVGQMKESV HHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH IPNKRPERNLPPKDWVVRGKGDGEQRVVKSLYLGDGELEAHNWKLHARYGELKAKEARWE CCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCEEECCEEEEEECCCCHHHHHHHH EFMLDDAELVVTAFGSAARIAKSAVMAARDKGLKVGLLRPITLYPFPEKAFLAATERCKK HHHCCCHHEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCEEECCCCCHHHHHHHHHHHH VLDIELNAGQMVEDVRLSVARDAEVFFYGRPPGAGSLPTPEELLEQITNYYV HHEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure TKRLFMKGNEALAMAAIEAGCRYYFGYPITPQSDIPEYMSRELPKLGGEFIQAESEVAS CCEEEECCCCHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHH INMLLGASATGVRAMTSSSSPGISLKQEGISYMAGAELPGVIVNICRSGPGLGGIDASQA EEHEECCCCCCCEEEECCCCCCCEEHHHCCHHHCCCCCCHHHHHHHHCCCCCCCCCCCHH DYFQAVKGGGHGGYHIIVLAPASVQEMYDLTMLAFDLADLYRMPSMILGDSVVGQMKESV HHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH IPNKRPERNLPPKDWVVRGKGDGEQRVVKSLYLGDGELEAHNWKLHARYGELKAKEARWE CCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCEEECCEEEEEECCCCHHHHHHHH EFMLDDAELVVTAFGSAARIAKSAVMAARDKGLKVGLLRPITLYPFPEKAFLAATERCKK HHHCCCHHEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCEEECCCCCHHHHHHHHHHHH VLDIELNAGQMVEDVRLSVARDAEVFFYGRPPGAGSLPTPEELLEQITNYYV HHEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]