Click here to switch to the map view.

The map label for this gene is vorA [H]

Identifier: 78222522

GI number: 78222522

Start: 1469855

End: 1470598

Strand: Direct

Name: vorA [H]

Synonym: Gmet_1308

Alternate gene names: 78222522

Gene position: 1469855-1470598 (Clockwise)

Preceding gene: 78222521

Following gene: 78222523

Centisome position: 36.77

GC content: 60.75

Gene sequence:

>744_bases
ATGCAACAGGTCTTCAAAAAACCGGTCAGTCTCAAGGATGTCCAGACCCACTTTTGCCCCGGCTGCCATCACGGCACCTT
TCACCGTCTCGTGGCCGAGGCCATGGACGAGTTCGGCGTCCAGAAGAGGACCATCGGCGTCGCGTCGGTTGGGTGTTCGG
TCTTTCTCTACGGCTATTTTGATATTGACGTGGTCGAAGCTCCCCATGGCCGGGCTCCGGCGGTGGCCACCGGCGTCAAG
CGTGCCCGGCCCGACGCCTTTGTCTTCACCTACCAGGGTGACGGCGACCTGGCCGCCATCGGCACCTCCGAGATCATCCA
CGCCGCCAACCGTGGCGAGGACATGACGGTCATCTTCGTCAACAACACCACCTATGGCATGACCGGTGGCCAGATGGCCC
CCACTACCCTTGTGGGGCAGAGGACTTCAACCTCTCCCTACGGGAGGAACCAGGGGAAGGATGGCGCCCCCATCAGGATG
GCCGAGCTCCTTGCCCAACTCGAGGGGGTTGCCTTCTCGGCCAGGGTGGCGGTCAACAATCCCAAGAACCTCATGGACGC
CAAGCGGCAGATCAAGAAGGCGTTCCGGTACCAGGCGGAGGGGAAAGGGTTCTCCTTCATCGAAGCCCTCTCGTCTTGCC
CCACCAACTGGGGGATGGATCCGATCAAGGCAAACGAGCGCGTTGGTACTGAAATGTGCGCCTATTTTCCGCTTGGAGTA
TTCAAGAACGCTGCTGACCTCTAG

Upstream 100 bases:

>100_bases
AGATCACTAACTATTACGTCTAGGGGGGATCACCGGGGATGATTTGATTGATGGTTTTTTACCGGTCCCCGGTTCCTGAT
CCCCGATCCCGAGGTTTTTA

Downstream 100 bases:

>100_bases
CGGACTGCGGCAATCTAGAAATTCTCAAGGAGTTGTGTTCCCATGCGTCATGACGTTTTTATTTCCGGTTTCGGTGGCCA
GGGAGTTCTTTTGGCCGGAA

Product: thiamine pyrophosphate enzyme, C-terminal TPP-binding

Products: NA

Alternate protein names: VOR; 2-oxoisovalerate oxidoreductase alpha chain; 2-oxoisovalerate-ferredoxin oxidoreductase subunit alpha [H]

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MQQVFKKPVSLKDVQTHFCPGCHHGTFHRLVAEAMDEFGVQKRTIGVASVGCSVFLYGYFDIDVVEAPHGRAPAVATGVK
RARPDAFVFTYQGDGDLAAIGTSEIIHAANRGEDMTVIFVNNTTYGMTGGQMAPTTLVGQRTSTSPYGRNQGKDGAPIRM
AELLAQLEGVAFSARVAVNNPKNLMDAKRQIKKAFRYQAEGKGFSFIEALSSCPTNWGMDPIKANERVGTEMCAYFPLGV
FKNAADL

Sequences:

>Translated_247_residues
MQQVFKKPVSLKDVQTHFCPGCHHGTFHRLVAEAMDEFGVQKRTIGVASVGCSVFLYGYFDIDVVEAPHGRAPAVATGVK
RARPDAFVFTYQGDGDLAAIGTSEIIHAANRGEDMTVIFVNNTTYGMTGGQMAPTTLVGQRTSTSPYGRNQGKDGAPIRM
AELLAQLEGVAFSARVAVNNPKNLMDAKRQIKKAFRYQAEGKGFSFIEALSSCPTNWGMDPIKANERVGTEMCAYFPLGV
FKNAADL
>Mature_247_residues
MQQVFKKPVSLKDVQTHFCPGCHHGTFHRLVAEAMDEFGVQKRTIGVASVGCSVFLYGYFDIDVVEAPHGRAPAVATGVK
RARPDAFVFTYQGDGDLAAIGTSEIIHAANRGEDMTVIFVNNTTYGMTGGQMAPTTLVGQRTSTSPYGRNQGKDGAPIRM
AELLAQLEGVAFSARVAVNNPKNLMDAKRQIKKAFRYQAEGKGFSFIEALSSCPTNWGMDPIKANERVGTEMCAYFPLGV
FKNAADL

Specific function: Unknown

COG id: COG1013

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019752
- InterPro:   IPR002869
- InterPro:   IPR011766 [H]

Pfam domain/function: PF01558 POR; PF02775 TPP_enzyme_C [H]

EC number: NA

Molecular weight: Translated: 26764; Mature: 26764

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQVFKKPVSLKDVQTHFCPGCHHGTFHRLVAEAMDEFGVQKRTIGVASVGCSVFLYGYF
CCHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHEEEHHECCCEEEEEEEE
DIDVVEAPHGRAPAVATGVKRARPDAFVFTYQGDGDLAAIGTSEIIHAANRGEDMTVIFV
EEEEEECCCCCCCHHHHHHHHCCCCEEEEEEECCCCEEEECHHHHHHHHCCCCCEEEEEE
NNTTYGMTGGQMAPTTLVGQRTSTSPYGRNQGKDGAPIRMAELLAQLEGVAFSARVAVNN
CCCEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEEECC
PKNLMDAKRQIKKAFRYQAEGKGFSFIEALSSCPTNWGMDPIKANERVGTEMCAYFPLGV
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
FKNAADL
HHHCCCC
>Mature Secondary Structure
MQQVFKKPVSLKDVQTHFCPGCHHGTFHRLVAEAMDEFGVQKRTIGVASVGCSVFLYGYF
CCHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHEEEHHECCCEEEEEEEE
DIDVVEAPHGRAPAVATGVKRARPDAFVFTYQGDGDLAAIGTSEIIHAANRGEDMTVIFV
EEEEEECCCCCCCHHHHHHHHCCCCEEEEEEECCCCEEEECHHHHHHHHCCCCCEEEEEE
NNTTYGMTGGQMAPTTLVGQRTSTSPYGRNQGKDGAPIRMAELLAQLEGVAFSARVAVNN
CCCEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEEECC
PKNLMDAKRQIKKAFRYQAEGKGFSFIEALSSCPTNWGMDPIKANERVGTEMCAYFPLGV
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
FKNAADL
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9108258 [H]