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The map label for this gene is yjbG [H]

Identifier: 78222509

GI number: 78222509

Start: 1455763

End: 1457601

Strand: Reverse

Name: yjbG [H]

Synonym: Gmet_1295

Alternate gene names: 78222509

Gene position: 1457601-1455763 (Counterclockwise)

Preceding gene: 78222511

Following gene: 78222506

Centisome position: 36.46

GC content: 61.94

Gene sequence:

>1839_bases
GTGGTAATCCAGAATGGGAGTGCAACGCAACCGCCCATTTTCCCTGAAAGGATTGCCATGACTACCGACATCACCGCCAT
GCTCTGGGACACCGATCCCCTCTACCATGCACACGCACCGGAACTCGAAGCCGATCTCGCCTCAGGAGCCGCCGAGACGA
AAGCATTCCGGGTAGCCTACCTGGGGAAGGTCGCCTCCCTCGATGCAGCCGGACTTCTGGAAGCTCTCCGGCGTTACGAG
GCCCTCACGGAGCTTCTTGTGAAACCCCAGCTTTACGCCCATCTCCTCTTCGCTGCCGACGCCGGGAACGACGAGCACAA
GAAGCTCTCCCAACGGACTGCCGAGTTCGGCAACCTCATGGGGCGTGAGCTCCTCTTCTTCGATCTGGAGATCATGGAGA
TCCCCGACGGGGGTTTCGCGGAGATTGTCGCGGACGGTGGCTTGGCCGGCTACCGCCACTACCTGGAGAGCGTGCGCAAA
TTCAAGCCCCACACCCTCACGGAGCGGGAGGAGCAGCTCCTGAAGCTGAAGAACCTCACGGGGGCCGAGGCCTTCACCCG
GCTCTTTGACGAGCTGTCGGCATCCTTCCGCTACCGGATGGAACTGGACGGGGAAGAACGGGAATTCACCGGCGAGGAGC
TCCTGGGGCTCCTCCATCATCCAGACGCAACAGTGCGGGAGCGGGCCTTCGCCATCTTCCTCAGGCGCCACGAGGAGGAG
GGGATCGCCCTCGGTGCCATCTTCAACACCGTGGCTCTCGACCACGGCCAGGAATTGGAGCTCCGCAGCTACCGCCACCC
CATGGAGCCCACCAACCTGGGGAACGAAATCCCCGAAGAAGTGGTGAATCGTCTCATGGATGTCTCTGAGGCCAACTACG
GCCTGGCCCGGGACTATTTCCGCCTCAAGGCGCGGCTCCTGGGGCTTCCGAAGCTCAAAAATACTGATGTCTACGCCCCG
GCTGGCGAAACGGACCGCCATTACACCTTCGAGGAGGCCCGGGACTTGGTCCTGGAGGCCTATGGTGCCTTCCAGCCCCG
CTTCCGCGACATCTGCGCCGCCTTTTTCGCCGAGCGGCGTATTGACGTGCTGCCACGCCCCGGCAAGGGAGGAGGCGCGT
TCTGCATGGGGATGACGCCGAGCCTCTCCCCGTATGTGCTCCTGAACTTCACCGGCAACCTGCGCGACGTGGCGACCCTG
GCCCACGAACTGGGGCACGGGCTCCACTTCGTCCTGGCCCAGAAGCAGACCATGCTCAACTACCACGCACCGCTTCCTCT
GGCGGAAACGGCGTCGGTCTTTGGCGAGATGCTCCTGACCCGGTTCCTTCTTGAACGGGAATCCGACCCGCAAGTGAAGA
TCGCCCTTCTCTGCGCCAAGATCGAGGATATCATCGCCACCACCTTCCGCCAGAACGTCCTCACCCGCTTCGAGGAACGG
ATGCACAAGGAGCGGAAGGAGGGGCTCCTGACCTCATCACGGCTCTGTGACCTCTGGTGGGAGGAGAACGGCAAGCTCTA
CGGCGACGCCGTGGAGATGATCGAGCCCTACCGCTGGGGGTGGAGCTACATCTCCCACTTCATCCATGCCCGCTTCTACT
GCTACTCCTACACTTTCGCGGAGCTTCTGGTCCTTTCCCTCTACCGCAAATACCTGGAGGACGGCGAAACGTTCATCCCC
ACCTATGTGGGAATCCTGGAAAGCGGCGGCTCCCTGTCGCCGGCAGACACGGTGAAGCCCGCGGGAATCGACCTGGCCGA
TCCCCACTTCTGGCAGAAGGGGTATGATTTTCTGGCGGAGCTGATCGAAGAGTTGAAGGGATTGGTGGCGAAACAGTAA

Upstream 100 bases:

>100_bases
GCAGTTCAATGGTCAGGTCTTCGATCATGGATGTATTATCCTCGGAAGCCCGAAGTATCTCCCCTTCCTTTCAAAAACGC
TATTGATTTCTCCCTCCCCT

Downstream 100 bases:

>100_bases
GTTCGCACGATGCATGCAAAAACAGAAAGGCCGCCGGGATTCATTCCCGACGGCCTTTCTTCTTACTTCGGCACCAATCA
GTACCGGTAATGATCGGTCT

Product: peptidase M3B, oligoendopeptidase-related clade 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 612; Mature: 612

Protein sequence:

>612_residues
MVIQNGSATQPPIFPERIAMTTDITAMLWDTDPLYHAHAPELEADLASGAAETKAFRVAYLGKVASLDAAGLLEALRRYE
ALTELLVKPQLYAHLLFAADAGNDEHKKLSQRTAEFGNLMGRELLFFDLEIMEIPDGGFAEIVADGGLAGYRHYLESVRK
FKPHTLTEREEQLLKLKNLTGAEAFTRLFDELSASFRYRMELDGEEREFTGEELLGLLHHPDATVRERAFAIFLRRHEEE
GIALGAIFNTVALDHGQELELRSYRHPMEPTNLGNEIPEEVVNRLMDVSEANYGLARDYFRLKARLLGLPKLKNTDVYAP
AGETDRHYTFEEARDLVLEAYGAFQPRFRDICAAFFAERRIDVLPRPGKGGGAFCMGMTPSLSPYVLLNFTGNLRDVATL
AHELGHGLHFVLAQKQTMLNYHAPLPLAETASVFGEMLLTRFLLERESDPQVKIALLCAKIEDIIATTFRQNVLTRFEER
MHKERKEGLLTSSRLCDLWWEENGKLYGDAVEMIEPYRWGWSYISHFIHARFYCYSYTFAELLVLSLYRKYLEDGETFIP
TYVGILESGGSLSPADTVKPAGIDLADPHFWQKGYDFLAELIEELKGLVAKQ

Sequences:

>Translated_612_residues
MVIQNGSATQPPIFPERIAMTTDITAMLWDTDPLYHAHAPELEADLASGAAETKAFRVAYLGKVASLDAAGLLEALRRYE
ALTELLVKPQLYAHLLFAADAGNDEHKKLSQRTAEFGNLMGRELLFFDLEIMEIPDGGFAEIVADGGLAGYRHYLESVRK
FKPHTLTEREEQLLKLKNLTGAEAFTRLFDELSASFRYRMELDGEEREFTGEELLGLLHHPDATVRERAFAIFLRRHEEE
GIALGAIFNTVALDHGQELELRSYRHPMEPTNLGNEIPEEVVNRLMDVSEANYGLARDYFRLKARLLGLPKLKNTDVYAP
AGETDRHYTFEEARDLVLEAYGAFQPRFRDICAAFFAERRIDVLPRPGKGGGAFCMGMTPSLSPYVLLNFTGNLRDVATL
AHELGHGLHFVLAQKQTMLNYHAPLPLAETASVFGEMLLTRFLLERESDPQVKIALLCAKIEDIIATTFRQNVLTRFEER
MHKERKEGLLTSSRLCDLWWEENGKLYGDAVEMIEPYRWGWSYISHFIHARFYCYSYTFAELLVLSLYRKYLEDGETFIP
TYVGILESGGSLSPADTVKPAGIDLADPHFWQKGYDFLAELIEELKGLVAKQ
>Mature_612_residues
MVIQNGSATQPPIFPERIAMTTDITAMLWDTDPLYHAHAPELEADLASGAAETKAFRVAYLGKVASLDAAGLLEALRRYE
ALTELLVKPQLYAHLLFAADAGNDEHKKLSQRTAEFGNLMGRELLFFDLEIMEIPDGGFAEIVADGGLAGYRHYLESVRK
FKPHTLTEREEQLLKLKNLTGAEAFTRLFDELSASFRYRMELDGEEREFTGEELLGLLHHPDATVRERAFAIFLRRHEEE
GIALGAIFNTVALDHGQELELRSYRHPMEPTNLGNEIPEEVVNRLMDVSEANYGLARDYFRLKARLLGLPKLKNTDVYAP
AGETDRHYTFEEARDLVLEAYGAFQPRFRDICAAFFAERRIDVLPRPGKGGGAFCMGMTPSLSPYVLLNFTGNLRDVATL
AHELGHGLHFVLAQKQTMLNYHAPLPLAETASVFGEMLLTRFLLERESDPQVKIALLCAKIEDIIATTFRQNVLTRFEER
MHKERKEGLLTSSRLCDLWWEENGKLYGDAVEMIEPYRWGWSYISHFIHARFYCYSYTFAELLVLSLYRKYLEDGETFIP
TYVGILESGGSLSPADTVKPAGIDLADPHFWQKGYDFLAELIEELKGLVAKQ

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 69349; Mature: 69349

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIQNGSATQPPIFPERIAMTTDITAMLWDTDPLYHAHAPELEADLASGAAETKAFRVAY
CEECCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHHH
LGKVASLDAAGLLEALRRYEALTELLVKPQLYAHLLFAADAGNDEHKKLSQRTAEFGNLM
HHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHH
GRELLFFDLEIMEIPDGGFAEIVADGGLAGYRHYLESVRKFKPHTLTEREEQLLKLKNLT
CCCEEEEEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
GAEAFTRLFDELSASFRYRMELDGEEREFTGEELLGLLHHPDATVRERAFAIFLRRHEEE
CHHHHHHHHHHHHHCEEEEEECCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
GIALGAIFNTVALDHGQELELRSYRHPMEPTNLGNEIPEEVVNRLMDVSEANYGLARDYF
CEEHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH
RLKARLLGLPKLKNTDVYAPAGETDRHYTFEEARDLVLEAYGAFQPRFRDICAAFFAERR
HHHHHHHCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
IDVLPRPGKGGGAFCMGMTPSLSPYVLLNFTGNLRDVATLAHELGHGLHFVLAQKQTMLN
CCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEHHHHHHHHH
YHAPLPLAETASVFGEMLLTRFLLERESDPQVKIALLCAKIEDIIATTFRQNVLTRFEER
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
MHKERKEGLLTSSRLCDLWWEENGKLYGDAVEMIEPYRWGWSYISHFIHARFYCYSYTFA
HHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
ELLVLSLYRKYLEDGETFIPTYVGILESGGSLSPADTVKPAGIDLADPHFWQKGYDFLAE
HHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
LIEELKGLVAKQ
HHHHHHHHHCCC
>Mature Secondary Structure
MVIQNGSATQPPIFPERIAMTTDITAMLWDTDPLYHAHAPELEADLASGAAETKAFRVAY
CEECCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHHH
LGKVASLDAAGLLEALRRYEALTELLVKPQLYAHLLFAADAGNDEHKKLSQRTAEFGNLM
HHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHH
GRELLFFDLEIMEIPDGGFAEIVADGGLAGYRHYLESVRKFKPHTLTEREEQLLKLKNLT
CCCEEEEEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
GAEAFTRLFDELSASFRYRMELDGEEREFTGEELLGLLHHPDATVRERAFAIFLRRHEEE
CHHHHHHHHHHHHHCEEEEEECCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
GIALGAIFNTVALDHGQELELRSYRHPMEPTNLGNEIPEEVVNRLMDVSEANYGLARDYF
CEEHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH
RLKARLLGLPKLKNTDVYAPAGETDRHYTFEEARDLVLEAYGAFQPRFRDICAAFFAERR
HHHHHHHCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
IDVLPRPGKGGGAFCMGMTPSLSPYVLLNFTGNLRDVATLAHELGHGLHFVLAQKQTMLN
CCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEHHHHHHHHH
YHAPLPLAETASVFGEMLLTRFLLERESDPQVKIALLCAKIEDIIATTFRQNVLTRFEER
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
MHKERKEGLLTSSRLCDLWWEENGKLYGDAVEMIEPYRWGWSYISHFIHARFYCYSYTFA
HHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
ELLVLSLYRKYLEDGETFIPTYVGILESGGSLSPADTVKPAGIDLADPHFWQKGYDFLAE
HHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
LIEELKGLVAKQ
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]