Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222507
Identifier: 78222507
GI number: 78222507
Start: 1453010
End: 1454095
Strand: Direct
Name: 78222507
Synonym: Gmet_1293
Alternate gene names: NA
Gene position: 1453010-1454095 (Clockwise)
Preceding gene: 78222504
Following gene: 78222508
Centisome position: 36.35
GC content: 59.76
Gene sequence:
>1086_bases ATGGGACCGCTGAAGATCGGCAAGCATGAGGCAAGGTATCCGCTCATCCAGGGAGGGATGGGGGTTCGCATCTCAGGGTG GAGGCTTGCGGGGCACGTGGCCAGGTGCGGCGGCGTGGGGCTCGTGGCCACTGCCGGCATTACTCTCAACAGCGGCCTCT ACACCGGTTCTAATTACCTCCAGTCCAATCCAGAGGCGCTTCGACAGGAGCTGCGCAAGGCTTACGAAGTTGCTCCCGAC GGGGTAATCGGCGTTAACATCATGGTGGCGCTCGCCGATTATGAAGAGCTCGTCCAGGCTTCCATCGAGGGTGGCGCCAA GGTGATAGTCTGCGGAGCGGGTCTGCCCATGACGCTTCCCGGCCTTACCGCCCACGCCCCTGATGTGGCCATCGTACCGA TCGTGTCCTCGCTTCGTGCTGCCCAGCTCATCGCCAAAAAGTGGGATAAAGGATACGGCCGTCTTCCCGATGCGGTTGTT GTGGAAGACCCCGACACCGCCGGCGGTCACCTGGGTGAAAAGCTGGAAAACATCGGTACCGGTGACTATGACCAGTACGG CACCATCCGGTCCATAAAGGAATTCTTCCGCTCCGAATACGGTAAAGAGATACCGATTATCGCCGCAGGGGGTATTTGGG ACCGTGCCGACGTCCTCCACGCCATTGCCGAAGGGGCCGACGGTGTTCAGATGGCGAGCCGCTTCGTGCCGACGGTTGAG TGCGATGCCGAAGACGCCTACAAGCAGATGTACCTCGATTGCCGCAAGGAGGATATCGGCCTCATCATGAGCCCGGCGGG GCTTCCGGGGCGAGCCATCCTCAGCAATCAGGAGAATATAACTCTTTATGATGAGACAAACGCAACTTCCTGCAGCAATG CTTGCCTGAAGAAATGCTCCTACAAGGAAAGCGGCGAGCGGTTTTGCATCGTAAGTGCCCTCGACCGGGCCCAGCAGGGA GATGTGGAGTCGGGGCTCGTCTTCTGCGGTACCAACGCCTGGAAGGCCGACCGCATCACCACCGTTCAGGAAATCTTCGA CGAGCTCTTCGCCGAGGAGGCCGGTCAGGCAGAAAAGGCCGCATAA
Upstream 100 bases:
>100_bases TTGCAAGGGAGGATTTCGTTTTACAAAAGTATTACACATGGAGTGGTTACGATTCTGCTATGGTTGCCGAGGTAAAACAC ACCGGTAAGGGAGGAATTTG
Downstream 100 bases:
>100_bases GTCGTTTTCTTTGACGCACAGAGGAAAAGGGGTACCAGCAGGTGCCCCTTTTTTTTGTTGGAGCGGGAATTCGACTTTGA CCCTGCAGTGCCATAGATGT
Product: 2-nitropropane dioxygenase, NPD
Products: NA
Alternate protein names: 2-Nitropropane Dioxygenase; Enoyl-(Acyl-Carrier-Protein) Reductase II; Oxidoreductase 2-Nitropropane Dioxygenase Family; 2-Nitropropane Dioxygenase Family Oxidoreductase; Dioxygenase; 2-Nitropropane Dioxygenase-Like Protein; 2-Nitropropane Dioxygenase Npd; Oxidoreductase; Dioxygenase Related 2-Nitropropane Dioxygenase; Enoyl-[Acyl-Carrier Protein] Reductase; Enoyl-[Acyl-Carrier-Protein] Reductase; Oxidoreductase 2-Nitropropane Dioxygenase Family Protein; Enoyl-(Acyl-Carrier-Protein) Reductase; Trans-2-Enoyl-ACP Reductase; Dioxygenases Related 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family; Flavin-Containing Oxidoreductase; Enoyl-Acyl Carrier Protein(ACP) Reductase; 2-Nitropropane Dioxygenase-Releated Protein; Enoyl-(Acyl-Carrier-Protein) Reductase FabK; Dioxygenase/Reductase; 2-Nitropropane Dioxygenase-Like Dioxygenase
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MGPLKIGKHEARYPLIQGGMGVRISGWRLAGHVARCGGVGLVATAGITLNSGLYTGSNYLQSNPEALRQELRKAYEVAPD GVIGVNIMVALADYEELVQASIEGGAKVIVCGAGLPMTLPGLTAHAPDVAIVPIVSSLRAAQLIAKKWDKGYGRLPDAVV VEDPDTAGGHLGEKLENIGTGDYDQYGTIRSIKEFFRSEYGKEIPIIAAGGIWDRADVLHAIAEGADGVQMASRFVPTVE CDAEDAYKQMYLDCRKEDIGLIMSPAGLPGRAILSNQENITLYDETNATSCSNACLKKCSYKESGERFCIVSALDRAQQG DVESGLVFCGTNAWKADRITTVQEIFDELFAEEAGQAEKAA
Sequences:
>Translated_361_residues MGPLKIGKHEARYPLIQGGMGVRISGWRLAGHVARCGGVGLVATAGITLNSGLYTGSNYLQSNPEALRQELRKAYEVAPD GVIGVNIMVALADYEELVQASIEGGAKVIVCGAGLPMTLPGLTAHAPDVAIVPIVSSLRAAQLIAKKWDKGYGRLPDAVV VEDPDTAGGHLGEKLENIGTGDYDQYGTIRSIKEFFRSEYGKEIPIIAAGGIWDRADVLHAIAEGADGVQMASRFVPTVE CDAEDAYKQMYLDCRKEDIGLIMSPAGLPGRAILSNQENITLYDETNATSCSNACLKKCSYKESGERFCIVSALDRAQQG DVESGLVFCGTNAWKADRITTVQEIFDELFAEEAGQAEKAA >Mature_360_residues GPLKIGKHEARYPLIQGGMGVRISGWRLAGHVARCGGVGLVATAGITLNSGLYTGSNYLQSNPEALRQELRKAYEVAPDG VIGVNIMVALADYEELVQASIEGGAKVIVCGAGLPMTLPGLTAHAPDVAIVPIVSSLRAAQLIAKKWDKGYGRLPDAVVV EDPDTAGGHLGEKLENIGTGDYDQYGTIRSIKEFFRSEYGKEIPIIAAGGIWDRADVLHAIAEGADGVQMASRFVPTVEC DAEDAYKQMYLDCRKEDIGLIMSPAGLPGRAILSNQENITLYDETNATSCSNACLKKCSYKESGERFCIVSALDRAQQGD VESGLVFCGTNAWKADRITTVQEIFDELFAEEAGQAEKAA
Specific function: Unknown
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38532; Mature: 38401
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPLKIGKHEARYPLIQGGMGVRISGWRLAGHVARCGGVGLVATAGITLNSGLYTGSNYL CCCCCCCCCCCCCCEEECCCCEEEECEEHHHHHHHHCCCCEEEECCEEECCCEECCCHHH QSNPEALRQELRKAYEVAPDGVIGVNIMVALADYEELVQASIEGGAKVIVCGAGLPMTLP CCCHHHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHCCCCEEEEECCCCCCCCC GLTAHAPDVAIVPIVSSLRAAQLIAKKWDKGYGRLPDAVVVEDPDTAGGHLGEKLENIGT CCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCC GDYDQYGTIRSIKEFFRSEYGKEIPIIAAGGIWDRADVLHAIAEGADGVQMASRFVPTVE CCCHHCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHCCCCEE CDAEDAYKQMYLDCRKEDIGLIMSPAGLPGRAILSNQENITLYDETNATSCSNACLKKCS CCHHHHHHHHHHHCCCCCCCEEECCCCCCCHHEECCCCCEEEEECCCCCHHHHHHHHHCC YKESGERFCIVSALDRAQQGDVESGLVFCGTNAWKADRITTVQEIFDELFAEEAGQAEKA CCCCCCEEEEEEHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHCC A C >Mature Secondary Structure GPLKIGKHEARYPLIQGGMGVRISGWRLAGHVARCGGVGLVATAGITLNSGLYTGSNYL CCCCCCCCCCCCCEEECCCCEEEECEEHHHHHHHHCCCCEEEECCEEECCCEECCCHHH QSNPEALRQELRKAYEVAPDGVIGVNIMVALADYEELVQASIEGGAKVIVCGAGLPMTLP CCCHHHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHCCCCEEEEECCCCCCCCC GLTAHAPDVAIVPIVSSLRAAQLIAKKWDKGYGRLPDAVVVEDPDTAGGHLGEKLENIGT CCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCC GDYDQYGTIRSIKEFFRSEYGKEIPIIAAGGIWDRADVLHAIAEGADGVQMASRFVPTVE CCCHHCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHCCCCEE CDAEDAYKQMYLDCRKEDIGLIMSPAGLPGRAILSNQENITLYDETNATSCSNACLKKCS CCHHHHHHHHHHHCCCCCCCEEECCCCCCCHHEECCCCCEEEEECCCCCHHHHHHHHHCC YKESGERFCIVSALDRAQQGDVESGLVFCGTNAWKADRITTVQEIFDELFAEEAGQAEKA CCCCCCEEEEEEHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA