Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is ahcY [H]
Identifier: 78222508
GI number: 78222508
Start: 1454255
End: 1455685
Strand: Direct
Name: ahcY [H]
Synonym: Gmet_1294
Alternate gene names: 78222508
Gene position: 1454255-1455685 (Clockwise)
Preceding gene: 78222507
Following gene: 78222510
Centisome position: 36.38
GC content: 62.82
Gene sequence:
>1431_bases ATGTCGACAACCAGCACACCGACCGCGACGACTGCCGCGTTCACTGACTGCCACGTGAGGGATCTCTCCCTTGCCGCCTG GGGGCGCAAGGAGATGGTCATTGCCGAAACCGAGATGCCGGGCCTCATGGCCATCCGCGAGGAGTACGCCGCCAGCCAGC CCCTGAAGGGTGCCCGCATTGCCGGTTCGCTCCACATGACCATCCAGACCGCCATGCTCATCGAGACCCTGACGGCGCTG GGCGCCGAGGTGCGCTGGGCATCGTGCAACATCTTTTCCACCCAGGACCACGCCGCTGCCGCCATTGCCGCAGCCGGCAT CCCGGTCTTCGCCTACAAGGGGGAATCCCTGGAGGAGTACTGGGAGTTCACTCACCGGATCTTCGAGTGGCACGACGGCG GCACTCCCAACATGATCCTGGACGACGGCGGCGACGCCACGCTGCTCCTGCACCTGGGGAGCGACGCCGAGAAGGATCCG TCGGTTGTGGCCAATCCCACCTGTGAAGAAGAGCAGTTCCTCTTCGCCGCCATCAAGAAGCGCCTTGCCGAAAAACCGGA GTGGTACTCGAAGACCGCCGCAGCCATCAAGGGGGTGACGGAAGAGACCACCACTGGCGTGCACCGGCTCTACCAGATGC ACGAGAAAGGACGCCTCAAGTTCCCGGCAATCAACGTCAATGACTCGGTCACCAAGTCCAAGTTCGACAACATCTACGGT TGCCGCGAATCCCTGGTGGACGGCATCAAGCGGGCCACCGACGTGATGGTGGCCGGCAAGGTGGCCGTCATCTGCGGCTA CGGCGAGGTTGGCAAGGGGTGCGCCCAGGCCATGCGCGGGCTCCAGGCCCAGGTATGGGTCACCGAGATCGACCCCATCT GCGCCCTCCAGGCCGCCATGGAAGGGTACAAGGTGGTCACCATGGAGTGGGCCGCCGACAAGGCCGACATCTTCGTTACC ACCACCGGCAACATCAATGTCATCACCCATGACCACATGAAGGCCATGAAGCACAACGCCATTGTCTGCAACATCGGCCA CTTCGACAACGAGATCGAGGTTGCGGCCCTCAAGCAATACCAGTGGGAGAACATCAAGCCCCAGGTGGACCACATCATCT TCCCCGACGGCAAGCGGATCATCCTCCTGGCAGAGGGGCGGCTCGTGAACCTGGGGTGCGCCACGGGGCACCCCTCCTAC GTCATGTCCTCCTCCTTCGCCAACCAGACCTTGGCCCAGATGGAGCTCTTCTGCAATCCCGGCAAATACCCGGTCGGTGT TTACATGCTTCCCAAAGAGCTGGACGAGAAGGTGGCCCGGCTCCAGCTGAAGACCCTGGGCGCCATGCTCACGGAGCTCA CCGAAGAGCAGGCCGCCTACATCGGCGTGCCGAAGGCGGGACCCTACAAGACCGATCATTACCGGTACTGA
Upstream 100 bases:
>100_bases GGAGCGGGAATTCGACTTTGACCCTGCAGTGCCATAGATGTTATAAAATTTCTTTGCCTGTTGCTGTGATACCAAATAAC CATAACCAACGGAGGATACG
Downstream 100 bases:
>100_bases TTGGTGCCGAAGTAAGAAGAAAGGCCGTCGGGAATGAATCCCGGCGGCCTTTCTGTTTTTGCATGCATCGTGCGAACTTA CTGTTTCGCCACCAATCCCT
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 476; Mature: 475
Protein sequence:
>476_residues MSTTSTPTATTAAFTDCHVRDLSLAAWGRKEMVIAETEMPGLMAIREEYAASQPLKGARIAGSLHMTIQTAMLIETLTAL GAEVRWASCNIFSTQDHAAAAIAAAGIPVFAYKGESLEEYWEFTHRIFEWHDGGTPNMILDDGGDATLLLHLGSDAEKDP SVVANPTCEEEQFLFAAIKKRLAEKPEWYSKTAAAIKGVTEETTTGVHRLYQMHEKGRLKFPAINVNDSVTKSKFDNIYG CRESLVDGIKRATDVMVAGKVAVICGYGEVGKGCAQAMRGLQAQVWVTEIDPICALQAAMEGYKVVTMEWAADKADIFVT TTGNINVITHDHMKAMKHNAIVCNIGHFDNEIEVAALKQYQWENIKPQVDHIIFPDGKRIILLAEGRLVNLGCATGHPSY VMSSSFANQTLAQMELFCNPGKYPVGVYMLPKELDEKVARLQLKTLGAMLTELTEEQAAYIGVPKAGPYKTDHYRY
Sequences:
>Translated_476_residues MSTTSTPTATTAAFTDCHVRDLSLAAWGRKEMVIAETEMPGLMAIREEYAASQPLKGARIAGSLHMTIQTAMLIETLTAL GAEVRWASCNIFSTQDHAAAAIAAAGIPVFAYKGESLEEYWEFTHRIFEWHDGGTPNMILDDGGDATLLLHLGSDAEKDP SVVANPTCEEEQFLFAAIKKRLAEKPEWYSKTAAAIKGVTEETTTGVHRLYQMHEKGRLKFPAINVNDSVTKSKFDNIYG CRESLVDGIKRATDVMVAGKVAVICGYGEVGKGCAQAMRGLQAQVWVTEIDPICALQAAMEGYKVVTMEWAADKADIFVT TTGNINVITHDHMKAMKHNAIVCNIGHFDNEIEVAALKQYQWENIKPQVDHIIFPDGKRIILLAEGRLVNLGCATGHPSY VMSSSFANQTLAQMELFCNPGKYPVGVYMLPKELDEKVARLQLKTLGAMLTELTEEQAAYIGVPKAGPYKTDHYRY >Mature_475_residues STTSTPTATTAAFTDCHVRDLSLAAWGRKEMVIAETEMPGLMAIREEYAASQPLKGARIAGSLHMTIQTAMLIETLTALG AEVRWASCNIFSTQDHAAAAIAAAGIPVFAYKGESLEEYWEFTHRIFEWHDGGTPNMILDDGGDATLLLHLGSDAEKDPS VVANPTCEEEQFLFAAIKKRLAEKPEWYSKTAAAIKGVTEETTTGVHRLYQMHEKGRLKFPAINVNDSVTKSKFDNIYGC RESLVDGIKRATDVMVAGKVAVICGYGEVGKGCAQAMRGLQAQVWVTEIDPICALQAAMEGYKVVTMEWAADKADIFVTT TGNINVITHDHMKAMKHNAIVCNIGHFDNEIEVAALKQYQWENIKPQVDHIIFPDGKRIILLAEGRLVNLGCATGHPSYV MSSSFANQTLAQMELFCNPGKYPVGVYMLPKELDEKVARLQLKTLGAMLTELTEEQAAYIGVPKAGPYKTDHYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=460, Percent_Identity=61.0869565217391, Blast_Score=538, Evalue=1e-153, Organism=Homo sapiens, GI239937451, Length=440, Percent_Identity=60.9090909090909, Blast_Score=513, Evalue=1e-145, Organism=Homo sapiens, GI298286489, Length=465, Percent_Identity=49.6774193548387, Blast_Score=467, Evalue=1e-131, Organism=Homo sapiens, GI195539337, Length=465, Percent_Identity=49.6774193548387, Blast_Score=467, Evalue=1e-131, Organism=Homo sapiens, GI24308043, Length=465, Percent_Identity=49.6774193548387, Blast_Score=466, Evalue=1e-131, Organism=Homo sapiens, GI195539349, Length=465, Percent_Identity=49.6774193548387, Blast_Score=466, Evalue=1e-131, Organism=Homo sapiens, GI21361647, Length=461, Percent_Identity=49.2407809110629, Blast_Score=442, Evalue=1e-124, Organism=Caenorhabditis elegans, GI17506425, Length=463, Percent_Identity=59.6112311015119, Blast_Score=536, Evalue=1e-153, Organism=Saccharomyces cerevisiae, GI6320882, Length=475, Percent_Identity=59.1578947368421, Blast_Score=526, Evalue=1e-150, Organism=Drosophila melanogaster, GI24642172, Length=460, Percent_Identity=60.6521739130435, Blast_Score=534, Evalue=1e-152, Organism=Drosophila melanogaster, GI24656245, Length=466, Percent_Identity=50.4291845493562, Blast_Score=466, Evalue=1e-131, Organism=Drosophila melanogaster, GI45553387, Length=469, Percent_Identity=50.7462686567164, Blast_Score=462, Evalue=1e-130, Organism=Drosophila melanogaster, GI45553385, Length=468, Percent_Identity=50.6410256410256, Blast_Score=459, Evalue=1e-129,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 52290; Mature: 52159
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: PS00738 ADOHCYASE_1 ; PS00739 ADOHCYASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTSTPTATTAAFTDCHVRDLSLAAWGRKEMVIAETEMPGLMAIREEYAASQPLKGARI CCCCCCCCCCEEEECCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEE AGSLHMTIQTAMLIETLTALGAEVRWASCNIFSTQDHAAAAIAAAGIPVFAYKGESLEEY ECEEEHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHCCCEEEEECCCCHHHH WEFTHRIFEWHDGGTPNMILDDGGDATLLLHLGSDAEKDPSVVANPTCEEEQFLFAAIKK HHHHHHHHEECCCCCCCEEEECCCCEEEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHH RLAEKPEWYSKTAAAIKGVTEETTTGVHRLYQMHEKGRLKFPAINVNDSVTKSKFDNIYG HHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEECCEECCCCCHHHHHHHHHHH CRESLVDGIKRATDVMVAGKVAVICGYGEVGKGCAQAMRGLQAQVWVTEIDPICALQAAM HHHHHHHHHHHHHHEEEECCEEEEECCCCCCHHHHHHHHCCEEEEEEEECCHHHHHHHHH EGYKVVTMEWAADKADIFVTTTGNINVITHDHMKAMKHNAIVCNIGHFDNEIEVAALKQY CCCEEEEEEECCCCCCEEEEECCCEEEEECHHHHHHHCCEEEEEECCCCCCEEEEEEHHH QWENIKPQVDHIIFPDGKRIILLAEGRLVNLGCATGHPSYVMSSSFANQTLAQMELFCNP CCCCCCCCCCEEECCCCCEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHEEECC GKYPVGVYMLPKELDEKVARLQLKTLGAMLTELTEEQAAYIGVPKAGPYKTDHYRY CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCC >Mature Secondary Structure STTSTPTATTAAFTDCHVRDLSLAAWGRKEMVIAETEMPGLMAIREEYAASQPLKGARI CCCCCCCCCEEEECCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEE AGSLHMTIQTAMLIETLTALGAEVRWASCNIFSTQDHAAAAIAAAGIPVFAYKGESLEEY ECEEEHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHCCCEEEEECCCCHHHH WEFTHRIFEWHDGGTPNMILDDGGDATLLLHLGSDAEKDPSVVANPTCEEEQFLFAAIKK HHHHHHHHEECCCCCCCEEEECCCCEEEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHH RLAEKPEWYSKTAAAIKGVTEETTTGVHRLYQMHEKGRLKFPAINVNDSVTKSKFDNIYG HHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEECCEECCCCCHHHHHHHHHHH CRESLVDGIKRATDVMVAGKVAVICGYGEVGKGCAQAMRGLQAQVWVTEIDPICALQAAM HHHHHHHHHHHHHHEEEECCEEEEECCCCCCHHHHHHHHCCEEEEEEEECCHHHHHHHHH EGYKVVTMEWAADKADIFVTTTGNINVITHDHMKAMKHNAIVCNIGHFDNEIEVAALKQY CCCEEEEEEECCCCCCEEEEECCCEEEEECHHHHHHHCCEEEEEECCCCCCEEEEEEHHH QWENIKPQVDHIIFPDGKRIILLAEGRLVNLGCATGHPSYVMSSSFANQTLAQMELFCNP CCCCCCCCCCEEECCCCCEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHEEECC GKYPVGVYMLPKELDEKVARLQLKTLGAMLTELTEEQAAYIGVPKAGPYKTDHYRY CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA