Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
---|---|
Accession | NC_007517 |
Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78222353
Identifier: 78222353
GI number: 78222353
Start: 1257049
End: 1258194
Strand: Direct
Name: 78222353
Synonym: Gmet_1137
Alternate gene names: NA
Gene position: 1257049-1258194 (Clockwise)
Preceding gene: 78222352
Following gene: 78222354
Centisome position: 31.45
GC content: 69.11
Gene sequence:
>1146_bases ATGATCCTCGATTTTCTGACATCAAAACGCCGCGAACCGGCCGAGTGCATCATCCTCGTGGGTAGCGCCGGGCTTGAGAT CACCGACCTCTACCCCTTCCTCACGGAGGTGACGGTGGATGCCGGCCGGGCCGAGCCGACGGTGGCGACCATCACCTTCG AGAGCCGCCGCGACGAGCAGGGTCGGTGGCTCGTTCAGGACGACGGCCGCCTCGCCCCCTGGGAGCCCATAGTCATCGAG GCGGCCTTCGGCTCCGCCACCGAGGAGGTGATGCGGGGGTACATCCGGGAGGTCCGGGCCGACTACCCCGAGGATGCCGG GAGCGCCCGGGTGATCGTGGAGTGCCGTGACGACTCCCTGGCCCTGGATCGGGAGCATGTGCGGGAGGTCTGGGGAGGGG ACGCCCCCACCACCGACATGGTGATCGTCCCGGCGATCCTCGGCAAGTACGGGCTCTCACCGGACCCGGCCAACGGCAGC GGACAGACGGGGCTCGTCATCAACCAGGACGGGACCGACATCGAGTTTCTCCGCAGCCGGGCCGAGGCCAACGGCTACGA CCTCCTCTTCCGGGGGGGGATGGTCTACTTCGGCCCCATGCGCCTCGACGCGGAACCCCAGGAGACCATCATGGTCTACG CCGGCGAGGCGACCAGTGCCTACCGCTTCTCGGTCAGGGACGATGGGCACCAGGCCGACCGGGTCGCCTTCGACCGGGCC GAGACCGCCGGGAGCGGCACCGTCTCCGAAACGGTCGATCCGGACCTCCCCCTTTTGGGGAACGAGGCGGCCACGGGGGC TGGGAGCGGGCTCCCCGATTTCGCCTGGCGTATGAGCCGCCAGGGGGAGATGAGTGAAGACGAGTGGCGGGCCCGGGCCC AGCGCCGGGCCAACGACCTCTCCCTACGGGTGAAGGGGGAGGGGGAACTGGACGGTTCCCTCTACGGCCACGTGCTCCGG GTGGGGGAGCCGGTTGGGGTGGACGGCGTGGGGGATCGCTACGGCGGCATCTGGTTCGTGGATACCGTCAATCACCGGTT CAGCACCGAGGGATACCGCCAGAGCTTCAACCTGCTGCGCAACGCCTACGGCGACAACCTGGGAAGCGGCGCCGGCGGCG TTCTGGCCGGCGTGTTGGGGGGATAG
Upstream 100 bases:
>100_bases GATCGTCGATGCCAACCCCGACTTCCTCTACGGCGGCGACATGGTGCTGGAAGAGATGGAGGGGATGGTGATCCTGATAC CGAAGGCGAAGGAATAGGGG
Downstream 100 bases:
>100_bases ATGGACGACCTGCTCCTGGAACTGGCGCGGCAGTACCGCAACCGCTACTACGGCAAGTACCGCGGGTTCGTGACCGACAA CGACGACCCGGAGCAACGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MILDFLTSKRREPAECIILVGSAGLEITDLYPFLTEVTVDAGRAEPTVATITFESRRDEQGRWLVQDDGRLAPWEPIVIE AAFGSATEEVMRGYIREVRADYPEDAGSARVIVECRDDSLALDREHVREVWGGDAPTTDMVIVPAILGKYGLSPDPANGS GQTGLVINQDGTDIEFLRSRAEANGYDLLFRGGMVYFGPMRLDAEPQETIMVYAGEATSAYRFSVRDDGHQADRVAFDRA ETAGSGTVSETVDPDLPLLGNEAATGAGSGLPDFAWRMSRQGEMSEDEWRARAQRRANDLSLRVKGEGELDGSLYGHVLR VGEPVGVDGVGDRYGGIWFVDTVNHRFSTEGYRQSFNLLRNAYGDNLGSGAGGVLAGVLGG
Sequences:
>Translated_381_residues MILDFLTSKRREPAECIILVGSAGLEITDLYPFLTEVTVDAGRAEPTVATITFESRRDEQGRWLVQDDGRLAPWEPIVIE AAFGSATEEVMRGYIREVRADYPEDAGSARVIVECRDDSLALDREHVREVWGGDAPTTDMVIVPAILGKYGLSPDPANGS GQTGLVINQDGTDIEFLRSRAEANGYDLLFRGGMVYFGPMRLDAEPQETIMVYAGEATSAYRFSVRDDGHQADRVAFDRA ETAGSGTVSETVDPDLPLLGNEAATGAGSGLPDFAWRMSRQGEMSEDEWRARAQRRANDLSLRVKGEGELDGSLYGHVLR VGEPVGVDGVGDRYGGIWFVDTVNHRFSTEGYRQSFNLLRNAYGDNLGSGAGGVLAGVLGG >Mature_381_residues MILDFLTSKRREPAECIILVGSAGLEITDLYPFLTEVTVDAGRAEPTVATITFESRRDEQGRWLVQDDGRLAPWEPIVIE AAFGSATEEVMRGYIREVRADYPEDAGSARVIVECRDDSLALDREHVREVWGGDAPTTDMVIVPAILGKYGLSPDPANGS GQTGLVINQDGTDIEFLRSRAEANGYDLLFRGGMVYFGPMRLDAEPQETIMVYAGEATSAYRFSVRDDGHQADRVAFDRA ETAGSGTVSETVDPDLPLLGNEAATGAGSGLPDFAWRMSRQGEMSEDEWRARAQRRANDLSLRVKGEGELDGSLYGHVLR VGEPVGVDGVGDRYGGIWFVDTVNHRFSTEGYRQSFNLLRNAYGDNLGSGAGGVLAGVLGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41352; Mature: 41352
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILDFLTSKRREPAECIILVGSAGLEITDLYPFLTEVTVDAGRAEPTVATITFESRRDEQ CEECCCHHCCCCCCEEEEEECCCCCEEEHHHHHHHHHEECCCCCCCEEEEEEECCCCCCC GRWLVQDDGRLAPWEPIVIEAAFGSATEEVMRGYIREVRADYPEDAGSARVIVECRDDSL CCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCE ALDREHVREVWGGDAPTTDMVIVPAILGKYGLSPDPANGSGQTGLVINQDGTDIEFLRSR ECCHHHHHHHHCCCCCCCCEEEHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCHHHHHHH AEANGYDLLFRGGMVYFGPMRLDAEPQETIMVYAGEATSAYRFSVRDDGHQADRVAFDRA HCCCCEEEEEECCEEEECCEEECCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHCC ETAGSGTVSETVDPDLPLLGNEAATGAGSGLPDFAWRMSRQGEMSEDEWRARAQRRANDL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCE SLRVKGEGELDGSLYGHVLRVGEPVGVDGVGDRYGGIWFVDTVNHRFSTEGYRQSFNLLR EEEEECCCCCCCHHHHEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH NAYGDNLGSGAGGVLAGVLGG HHHCCCCCCCCCHHHHHHCCC >Mature Secondary Structure MILDFLTSKRREPAECIILVGSAGLEITDLYPFLTEVTVDAGRAEPTVATITFESRRDEQ CEECCCHHCCCCCCEEEEEECCCCCEEEHHHHHHHHHEECCCCCCCEEEEEEECCCCCCC GRWLVQDDGRLAPWEPIVIEAAFGSATEEVMRGYIREVRADYPEDAGSARVIVECRDDSL CCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCE ALDREHVREVWGGDAPTTDMVIVPAILGKYGLSPDPANGSGQTGLVINQDGTDIEFLRSR ECCHHHHHHHHCCCCCCCCEEEHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCHHHHHHH AEANGYDLLFRGGMVYFGPMRLDAEPQETIMVYAGEATSAYRFSVRDDGHQADRVAFDRA HCCCCEEEEEECCEEEECCEEECCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHCC ETAGSGTVSETVDPDLPLLGNEAATGAGSGLPDFAWRMSRQGEMSEDEWRARAQRRANDL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCE SLRVKGEGELDGSLYGHVLRVGEPVGVDGVGDRYGGIWFVDTVNHRFSTEGYRQSFNLLR EEEEECCCCCCCHHHHEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH NAYGDNLGSGAGGVLAGVLGG HHHCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA