Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222354
Identifier: 78222354
GI number: 78222354
Start: 1258195
End: 1259007
Strand: Direct
Name: 78222354
Synonym: Gmet_1138
Alternate gene names: NA
Gene position: 1258195-1259007 (Clockwise)
Preceding gene: 78222353
Following gene: 78222355
Centisome position: 31.48
GC content: 66.54
Gene sequence:
>813_bases ATGGACGACCTGCTCCTGGAACTGGCGCGGCAGTACCGCAACCGCTACTACGGCAAGTACCGCGGGTTCGTGACCGACAA CGACGACCCGGAGCAACGGGGGCGGCTCCGCCTCATGGTTCCGTCGGTCCTGGGCGAAACCCCCACCGGGTGGGCCCTGC CGAGCCTCCCCTTCGGCGGTCTGGCCGACCAGGGGCTCTTCATGGTCCCCGAGGTGGATGCCCAGGTCTGGGTTGAGTTC GAGGCGGGGAACGTGAACCTTCCCATCTGGACCGGCACTTTCTGGCAGGCGAGCGGCGACCCGCCGGCGGAGGCGGCCAA GTCTCCCCCCACGACCCGGGTGCTGAAGACTCCGTCGGGCCACATCCTCCAGTTCGACGACGAGTCGGGGGCCGAGAAGT TCCGTCTGGCCCACCCGGCCGGGACCGAGATGACAGTGGACGAGAAGGGGACGGTGATCGTGGCAGACGCCAAGGGAAAC ACCCTGACCCTCGACGCCGACGCGGGGAAAGTGGTGGTGGAGGACAGTAACGGCAACACCATCACCATGTCCTCCAGCGG CACCACCATCGAGGACGCCAACGGCAACAAGGTGGAGATGGCCGCTTCTGGGGTCACCGTCAAGGGACAGCAGGTGGTGG TGGATGCGCAGACGGTGATGCTGGCGGGGCAGGGGGGCGAACCGATCATCAAGGGGCAGAGCTTCCTCACCCTCTTCGCC ACCCACGTCCACCCCAGCGCCATGGGACCCACGGGGCCTCCCATTCCGCAGGGGGAGATGAGTACTTTGTCCATGAAGGT GATGACGTCGTAG
Upstream 100 bases:
>100_bases CGAGGGATACCGCCAGAGCTTCAACCTGCTGCGCAACGCCTACGGCGACAACCTGGGAAGCGGCGCCGGCGGCGTTCTGG CCGGCGTGTTGGGGGGATAG
Downstream 100 bases:
>100_bases ATGTAAACCCCACGTGGTTGTACCTTGTATAAAGCACAACGCAAGGGCTGCGGAATTTGCGGCAGATCGTCGCACCCGCA GGAGCGACCGCGGAGGCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Protein D
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MDDLLLELARQYRNRYYGKYRGFVTDNDDPEQRGRLRLMVPSVLGETPTGWALPSLPFGGLADQGLFMVPEVDAQVWVEF EAGNVNLPIWTGTFWQASGDPPAEAAKSPPTTRVLKTPSGHILQFDDESGAEKFRLAHPAGTEMTVDEKGTVIVADAKGN TLTLDADAGKVVVEDSNGNTITMSSSGTTIEDANGNKVEMAASGVTVKGQQVVVDAQTVMLAGQGGEPIIKGQSFLTLFA THVHPSAMGPTGPPIPQGEMSTLSMKVMTS
Sequences:
>Translated_270_residues MDDLLLELARQYRNRYYGKYRGFVTDNDDPEQRGRLRLMVPSVLGETPTGWALPSLPFGGLADQGLFMVPEVDAQVWVEF EAGNVNLPIWTGTFWQASGDPPAEAAKSPPTTRVLKTPSGHILQFDDESGAEKFRLAHPAGTEMTVDEKGTVIVADAKGN TLTLDADAGKVVVEDSNGNTITMSSSGTTIEDANGNKVEMAASGVTVKGQQVVVDAQTVMLAGQGGEPIIKGQSFLTLFA THVHPSAMGPTGPPIPQGEMSTLSMKVMTS >Mature_270_residues MDDLLLELARQYRNRYYGKYRGFVTDNDDPEQRGRLRLMVPSVLGETPTGWALPSLPFGGLADQGLFMVPEVDAQVWVEF EAGNVNLPIWTGTFWQASGDPPAEAAKSPPTTRVLKTPSGHILQFDDESGAEKFRLAHPAGTEMTVDEKGTVIVADAKGN TLTLDADAGKVVVEDSNGNTITMSSSGTTIEDANGNKVEMAASGVTVKGQQVVVDAQTVMLAGQGGEPIIKGQSFLTLFA THVHPSAMGPTGPPIPQGEMSTLSMKVMTS
Specific function: Unknown
COG id: COG3501
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28750; Mature: 28750
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDLLLELARQYRNRYYGKYRGFVTDNDDPEQRGRLRLMVPSVLGETPTGWALPSLPFGG CHHHHHHHHHHHHHHCCEEEECEECCCCCHHHCCEEEEEEHHHHCCCCCCCCCCCCCCCC LADQGLFMVPEVDAQVWVEFEAGNVNLPIWTGTFWQASGDPPAEAAKSPPTTRVLKTPSG CCCCCEEEEEECCEEEEEEEECCCEEEEEEECCEEECCCCCHHHHCCCCCCEEEEECCCC HILQFDDESGAEKFRLAHPAGTEMTVDEKGTVIVADAKGNTLTLDADAGKVVVEDSNGNT CEEEECCCCCCCEEEEECCCCCEEEECCCCCEEEEECCCCEEEEECCCCEEEEECCCCCE ITMSSSGTTIEDANGNKVEMAASGVTVKGQQVVVDAQTVMLAGQGGEPIIKGQSFLTLFA EEECCCCCEEECCCCCEEEEEECCEEEECCEEEEEEEEEEEECCCCCCEEECCCEEEEEE THVHPSAMGPTGPPIPQGEMSTLSMKVMTS ECCCCCCCCCCCCCCCCCCCEEEEEEEEEC >Mature Secondary Structure MDDLLLELARQYRNRYYGKYRGFVTDNDDPEQRGRLRLMVPSVLGETPTGWALPSLPFGG CHHHHHHHHHHHHHHCCEEEECEECCCCCHHHCCEEEEEEHHHHCCCCCCCCCCCCCCCC LADQGLFMVPEVDAQVWVEFEAGNVNLPIWTGTFWQASGDPPAEAAKSPPTTRVLKTPSG CCCCCEEEEEECCEEEEEEEECCCEEEEEEECCEEECCCCCHHHHCCCCCCEEEEECCCC HILQFDDESGAEKFRLAHPAGTEMTVDEKGTVIVADAKGNTLTLDADAGKVVVEDSNGNT CEEEECCCCCCCEEEEECCCCCEEEECCCCCEEEEECCCCEEEEECCCCEEEEECCCCCE ITMSSSGTTIEDANGNKVEMAASGVTVKGQQVVVDAQTVMLAGQGGEPIIKGQSFLTLFA EEECCCCCEEECCCCCEEEEEECCEEEECCEEEEEEEEEEEECCCCCCEEECCCEEEEEE THVHPSAMGPTGPPIPQGEMSTLSMKVMTS ECCCCCCCCCCCCCCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA