Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222344
Identifier: 78222344
GI number: 78222344
Start: 1249212
End: 1251128
Strand: Direct
Name: 78222344
Synonym: Gmet_1128
Alternate gene names: NA
Gene position: 1249212-1251128 (Clockwise)
Preceding gene: 78222342
Following gene: 78222345
Centisome position: 31.25
GC content: 65.47
Gene sequence:
>1917_bases ATGCCTACGTATCTTCACCCGGGTGTGTATGTGGAGGAGATCCCGAGCGGTTCCCGCCCCATCGAAGGGGTCGGGACGTC CACCGCGGCGTTTGTCGGCTACACCACGAAGGGGCCGGTGGCCGAACCGACGCTGCTGTTCAAGTGGAGCGACTACGAGG AGCAGTTCGGCGGTATCCGCGATCTGGGGAAATCGGCCACGGGCGACCCCATGGGGTTCGCGGTCTACAGCTTTTTTCAG AACGGGGGGACCGCCGCCTACATCGTGCGGGCCATCACGGAGGGGAGCGCCGACACTGCTGAAGGGTTCCTCGTGAATCC CGACGATGCCACCCAGATTATCCGCTTCGCGGCAGCCAATCCGGGTGAATGGGGGAATGAGCTGCGGATCAGGTTCGAGG CCAAGGCGGATGCCCCCGGCTATTACACCCTGCGGGCTGGCGTCATGGACGGGACCGAGTTCAAGGAGCGGGAGCGGTTC AACGACCTGACCGTGGCCGACGACGGTGCTCCTGACTTCATCGAGAGCAAGGTGAACGATGCCTCGACGCTGATCAGCGT GGAGATGCAGGCGATCAGCCAGTACCTCCTGGGGGTGAGCATCAGCCAGGACCTGTCGGCCGTGGCCGACTTCAGCGTGC TCAACGACCTGACCATGACCGTCACCGTGGACGGCACCGCACGGGCGGTGACCTTTGGCGCCACCGAGTTCAGCGCCACT AGCACTCTGGCCGACGTGGCCGGGATTATTCAGGCCCAGGTGCGGGGTGCAGTGGTGGCCAACCCTGCGGTGCGCGACTT TACCTGTGCGGTGGACGGCAACCAGCTCGTCCTTACCTCCGGCACACGTCTTACCACTTCATCGGCGGTGGTTACCGGGC CGGGCGACGCCACCGACGCCTCCACCACACTCTTGCTGGGGCTCGCCAACGACGGTACCGAGCGGACCGGCCAGCAGTCC CTGGACGCCATGCTCTCGGGGATCGCCGGCCAGGTCTCCCTTGCCGGAGGGACCAACGGCAGCGAACCCGACAAGAACGC CTACGACGATATCTTCGCAGCCTTCGAGAAGGTGCGCGACATCAGCATCCTCTGCCTACCGGGCCAGGCCTGGGATTCCA CTACCGAGCAGTCGATCATCGATGCCGCCGTGGCCCATGCCGAGAAGATGCGGAGCCGCATGGTCATCATCGACCCCCCC GAGGGGACCGAACTCAGGACCGAGAAAGCGGTCAACGACCTGGGGTTCAAGCCCAAGACCTACTCGGTGGTCTACTACCC CTGGGCCAAAGTGGCCAACCCCTTCTACAACGCCGAGAGGAACCCCGGCGTCCCCTCAACGCTTCTCGTGCCCCCCAGCG GCTTTGCGGCGGGGATGTGGGCCAAGATCGACGGCCGGCGCGGCGTCTGGAAGGCCCCGGCGGGGGTCGAGACGTCGCTC CTCGGCGTGGCCGGCCTCCAGTACCCGGTGGAGGATGGGGAGCAGGACTCCCTCAACCCCCTCGGTGTCAACTGCCTCCG GAAGATGCCGGGCTTCGGGCCGGTCATCTGGGGGAGCCGCACCCTGGCCACCAAGGCCGACCCCGAGTGGCGCTACGTCC CCATCCGGCGCACCGCCATCATGATCGAGCAGAGCATCTACAACGGCATCCAGTGGGCGGTCTTCGAGCCCAACAACCAC AACCTCTGGGCCTCGCTGCGGGCCAACATCGGCTCCTTCATGGACGGGCTCTTCCGGGCCGGCGCCTTCCAGGGGGAAAA GGCCAACGACGCCTACTTCGTCCGCTGCGGCCTGGGTGACACCATGACCCAGGGTGACATCGACCGGGGCCAGGTCATCG TCATCGTCGGCTTCGCTCCCCTGAAACCGGCCGAGTTCGTCATTGTCCGCATCCAGCAGAAGGTTGCTGAACAATAA
Upstream 100 bases:
>100_bases CGATTCGCCTTCCGAGGCTGTTCCCCGCGATAAAACGATGATGCCAGAAGCAGTTACACCGTATTGCCGTATGTAAACAC TGACGAAAGGAGTTCAGACG
Downstream 100 bases:
>100_bases AGGAGGATACTGATGGCTGCACCGCTCTTTCCTGTAAACACCCATCGTCACGATCCCTACCGCACCTTCAAGTTCCAGGT CGTCATCGACGGCAAGGTGG
Product: Phage tail sheath protein
Products: NA
Alternate protein names: Tail Sheath Protein; Phage Tail Sheath Protein FI; Tail Sheath Protein Gp; Phage Tail Sheath Protein FI-Like Protein; Phage Tail Sheath Family Protein; Phage Tail Sheath Protein Fi-Like Protein; LOW QUALITY PROTEIN Phage Tail Sheath Protein; Bacteriophage Tail Sheath Protein; Cytoplasmic Fibril Protein; Phage Protein; Phage Tail Sheath Protein Fi-Like; Phage SPO1 DNA Polymerase-Related Protein
Number of amino acids: Translated: 638; Mature: 637
Protein sequence:
>638_residues MPTYLHPGVYVEEIPSGSRPIEGVGTSTAAFVGYTTKGPVAEPTLLFKWSDYEEQFGGIRDLGKSATGDPMGFAVYSFFQ NGGTAAYIVRAITEGSADTAEGFLVNPDDATQIIRFAAANPGEWGNELRIRFEAKADAPGYYTLRAGVMDGTEFKERERF NDLTVADDGAPDFIESKVNDASTLISVEMQAISQYLLGVSISQDLSAVADFSVLNDLTMTVTVDGTARAVTFGATEFSAT STLADVAGIIQAQVRGAVVANPAVRDFTCAVDGNQLVLTSGTRLTTSSAVVTGPGDATDASTTLLLGLANDGTERTGQQS LDAMLSGIAGQVSLAGGTNGSEPDKNAYDDIFAAFEKVRDISILCLPGQAWDSTTEQSIIDAAVAHAEKMRSRMVIIDPP EGTELRTEKAVNDLGFKPKTYSVVYYPWAKVANPFYNAERNPGVPSTLLVPPSGFAAGMWAKIDGRRGVWKAPAGVETSL LGVAGLQYPVEDGEQDSLNPLGVNCLRKMPGFGPVIWGSRTLATKADPEWRYVPIRRTAIMIEQSIYNGIQWAVFEPNNH NLWASLRANIGSFMDGLFRAGAFQGEKANDAYFVRCGLGDTMTQGDIDRGQVIVIVGFAPLKPAEFVIVRIQQKVAEQ
Sequences:
>Translated_638_residues MPTYLHPGVYVEEIPSGSRPIEGVGTSTAAFVGYTTKGPVAEPTLLFKWSDYEEQFGGIRDLGKSATGDPMGFAVYSFFQ NGGTAAYIVRAITEGSADTAEGFLVNPDDATQIIRFAAANPGEWGNELRIRFEAKADAPGYYTLRAGVMDGTEFKERERF NDLTVADDGAPDFIESKVNDASTLISVEMQAISQYLLGVSISQDLSAVADFSVLNDLTMTVTVDGTARAVTFGATEFSAT STLADVAGIIQAQVRGAVVANPAVRDFTCAVDGNQLVLTSGTRLTTSSAVVTGPGDATDASTTLLLGLANDGTERTGQQS LDAMLSGIAGQVSLAGGTNGSEPDKNAYDDIFAAFEKVRDISILCLPGQAWDSTTEQSIIDAAVAHAEKMRSRMVIIDPP EGTELRTEKAVNDLGFKPKTYSVVYYPWAKVANPFYNAERNPGVPSTLLVPPSGFAAGMWAKIDGRRGVWKAPAGVETSL LGVAGLQYPVEDGEQDSLNPLGVNCLRKMPGFGPVIWGSRTLATKADPEWRYVPIRRTAIMIEQSIYNGIQWAVFEPNNH NLWASLRANIGSFMDGLFRAGAFQGEKANDAYFVRCGLGDTMTQGDIDRGQVIVIVGFAPLKPAEFVIVRIQQKVAEQ >Mature_637_residues PTYLHPGVYVEEIPSGSRPIEGVGTSTAAFVGYTTKGPVAEPTLLFKWSDYEEQFGGIRDLGKSATGDPMGFAVYSFFQN GGTAAYIVRAITEGSADTAEGFLVNPDDATQIIRFAAANPGEWGNELRIRFEAKADAPGYYTLRAGVMDGTEFKERERFN DLTVADDGAPDFIESKVNDASTLISVEMQAISQYLLGVSISQDLSAVADFSVLNDLTMTVTVDGTARAVTFGATEFSATS TLADVAGIIQAQVRGAVVANPAVRDFTCAVDGNQLVLTSGTRLTTSSAVVTGPGDATDASTTLLLGLANDGTERTGQQSL DAMLSGIAGQVSLAGGTNGSEPDKNAYDDIFAAFEKVRDISILCLPGQAWDSTTEQSIIDAAVAHAEKMRSRMVIIDPPE GTELRTEKAVNDLGFKPKTYSVVYYPWAKVANPFYNAERNPGVPSTLLVPPSGFAAGMWAKIDGRRGVWKAPAGVETSLL GVAGLQYPVEDGEQDSLNPLGVNCLRKMPGFGPVIWGSRTLATKADPEWRYVPIRRTAIMIEQSIYNGIQWAVFEPNNHN LWASLRANIGSFMDGLFRAGAFQGEKANDAYFVRCGLGDTMTQGDIDRGQVIVIVGFAPLKPAEFVIVRIQQKVAEQ
Specific function: Unknown
COG id: COG3497
COG function: function code R; Phage tail sheath protein FI
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68256; Mature: 68125
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTYLHPGVYVEEIPSGSRPIEGVGTSTAAFVGYTTKGPVAEPTLLFKWSDYEEQFGGIR CCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCHHHHCCCHH DLGKSATGDPMGFAVYSFFQNGGTAAYIVRAITEGSADTAEGFLVNPDDATQIIRFAAAN HHCCCCCCCCCHHHHHHHHHCCCCEEEEEEEHHCCCCCCCCCEEECCCCHHHHHHHHCCC PGEWGNELRIRFEAKADAPGYYTLRAGVMDGTEFKERERFNDLTVADDGAPDFIESKVND CCCCCCEEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHCCCCEEECCCCCHHHHHHCCC ASTLISVEMQAISQYLLGVSISQDLSAVADFSVLNDLTMTVTVDGTARAVTFGATEFSAT CHHEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEEECCCEEEEEECCCCCCHH STLADVAGIIQAQVRGAVVANPAVRDFTCAVDGNQLVLTSGTRLTTSSAVVTGPGDATDA HHHHHHHHHHHHHHCCEEEECCCCCEEEEEECCCEEEEECCCEEEECCEEEECCCCCCCC STTLLLGLANDGTERTGQQSLDAMLSGIAGQVSLAGGTNGSEPDKNAYDDIFAAFEKVRD CEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCC ISILCLPGQAWDSTTEQSIIDAAVAHAEKMRSRMVIIDPPEGTELRTEKAVNDLGFKPKT EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHCCCCCCE YSVVYYPWAKVANPFYNAERNPGVPSTLLVPPSGFAAGMWAKIDGRRGVWKAPAGVETSL EEEEEECHHHHCCCHHCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCEECCCCCCHHH LGVAGLQYPVEDGEQDSLNPLGVNCLRKMPGFGPVIWGSRTLATKADPEWRYVPIRRTAI HHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEECCEEECCCCCCCEEEEEEEHHEE MIEQSIYNGIQWAVFEPNNHNLWASLRANIGSFMDGLFRAGAFQGEKANDAYFVRCGLGD EEEHHHHCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCC TMTQGDIDRGQVIVIVGFAPLKPAEFVIVRIQQKVAEQ CCCCCCCCCCCEEEEEECCCCCCCCEEEEEEHHHHCCC >Mature Secondary Structure PTYLHPGVYVEEIPSGSRPIEGVGTSTAAFVGYTTKGPVAEPTLLFKWSDYEEQFGGIR CCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCHHHHCCCHH DLGKSATGDPMGFAVYSFFQNGGTAAYIVRAITEGSADTAEGFLVNPDDATQIIRFAAAN HHCCCCCCCCCHHHHHHHHHCCCCEEEEEEEHHCCCCCCCCCEEECCCCHHHHHHHHCCC PGEWGNELRIRFEAKADAPGYYTLRAGVMDGTEFKERERFNDLTVADDGAPDFIESKVND CCCCCCEEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHCCCCEEECCCCCHHHHHHCCC ASTLISVEMQAISQYLLGVSISQDLSAVADFSVLNDLTMTVTVDGTARAVTFGATEFSAT CHHEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEEECCCEEEEEECCCCCCHH STLADVAGIIQAQVRGAVVANPAVRDFTCAVDGNQLVLTSGTRLTTSSAVVTGPGDATDA HHHHHHHHHHHHHHCCEEEECCCCCEEEEEECCCEEEEECCCEEEECCEEEECCCCCCCC STTLLLGLANDGTERTGQQSLDAMLSGIAGQVSLAGGTNGSEPDKNAYDDIFAAFEKVRD CEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCC ISILCLPGQAWDSTTEQSIIDAAVAHAEKMRSRMVIIDPPEGTELRTEKAVNDLGFKPKT EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHCCCCCCE YSVVYYPWAKVANPFYNAERNPGVPSTLLVPPSGFAAGMWAKIDGRRGVWKAPAGVETSL EEEEEECHHHHCCCHHCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCEECCCCCCHHH LGVAGLQYPVEDGEQDSLNPLGVNCLRKMPGFGPVIWGSRTLATKADPEWRYVPIRRTAI HHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEECCEEECCCCCCCEEEEEEEHHEE MIEQSIYNGIQWAVFEPNNHNLWASLRANIGSFMDGLFRAGAFQGEKANDAYFVRCGLGD EEEHHHHCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCC TMTQGDIDRGQVIVIVGFAPLKPAEFVIVRIQQKVAEQ CCCCCCCCCCCEEEEEECCCCCCCCEEEEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA