Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222345
Identifier: 78222345
GI number: 78222345
Start: 1251141
End: 1251650
Strand: Direct
Name: 78222345
Synonym: Gmet_1129
Alternate gene names: NA
Gene position: 1251141-1251650 (Clockwise)
Preceding gene: 78222344
Following gene: 78222346
Centisome position: 31.3
GC content: 61.18
Gene sequence:
>510_bases ATGGCTGCACCGCTCTTTCCTGTAAACACCCATCGTCACGATCCCTACCGCACCTTCAAGTTCCAGGTCGTCATCGACGG CAAGGTGGTGGCGGGGCTGAAGAAAATGGGAGCCCTCAAGAAGAAGACGACGCCGGTGAAGTGGCGCGCCTCCAATGATC CGTCCCACGAGCGGGTCATGCCGGGGGGCACAAGCTACGACCCGGTTACCCTTGAGCAGGGGCTTACTCACGACCCGGTC TTCGAGACCTGGGCGAACCTGGTGAACAACATCCAGGGGGATGCCGGCATGTCCCTGAAGAACTACCGCAAGGACATTAT CATCAACGTCCTGAACCTCCAGGGGAAGGTGGCCATTTCCTACAAGCTCTACCGGGCCTGGGTCTCCGACTACCAGGCGC TCCCGGACCTGGACGCCGGCAACATGAACACCATCGGCATCCAGACCATAACCCTGCAGCATGAGGGGTGGGAGCGCGAC ACCAGCGTCGCCGAGCCGGCTGAGACCTGA
Upstream 100 bases:
>100_bases CCAGGTCATCGTCATCGTCGGCTTCGCTCCCCTGAAACCGGCCGAGTTCGTCATTGTCCGCATCCAGCAGAAGGTTGCTG AACAATAAAGGAGGATACTG
Downstream 100 bases:
>100_bases TGCGGCTCCCCGGCGGCATCCTGCACGACGGCGCCCGGCTCCGGGACTTCGCCTTTCGTCCCCTGACCGGCGTGGTGGAG TTGGCCCTGGCCGAGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Tail Region Protein
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MAAPLFPVNTHRHDPYRTFKFQVVIDGKVVAGLKKMGALKKKTTPVKWRASNDPSHERVMPGGTSYDPVTLEQGLTHDPV FETWANLVNNIQGDAGMSLKNYRKDIIINVLNLQGKVAISYKLYRAWVSDYQALPDLDAGNMNTIGIQTITLQHEGWERD TSVAEPAET
Sequences:
>Translated_169_residues MAAPLFPVNTHRHDPYRTFKFQVVIDGKVVAGLKKMGALKKKTTPVKWRASNDPSHERVMPGGTSYDPVTLEQGLTHDPV FETWANLVNNIQGDAGMSLKNYRKDIIINVLNLQGKVAISYKLYRAWVSDYQALPDLDAGNMNTIGIQTITLQHEGWERD TSVAEPAET >Mature_168_residues AAPLFPVNTHRHDPYRTFKFQVVIDGKVVAGLKKMGALKKKTTPVKWRASNDPSHERVMPGGTSYDPVTLEQGLTHDPVF ETWANLVNNIQGDAGMSLKNYRKDIIINVLNLQGKVAISYKLYRAWVSDYQALPDLDAGNMNTIGIQTITLQHEGWERDT SVAEPAET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18893; Mature: 18762
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPLFPVNTHRHDPYRTFKFQVVIDGKVVAGLKKMGALKKKTTPVKWRASNDPSHERVM CCCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHCCHHCCCCCEEEECCCCCCCCEEC PGGTSYDPVTLEQGLTHDPVFETWANLVNNIQGDAGMSLKNYRKDIIINVLNLQGKVAIS CCCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHEEEEEEECCCCEEEEH YKLYRAWVSDYQALPDLDAGNMNTIGIQTITLQHEGWERDTSVAEPAET HHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure AAPLFPVNTHRHDPYRTFKFQVVIDGKVVAGLKKMGALKKKTTPVKWRASNDPSHERVM CCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHCCHHCCCCCEEEECCCCCCCCEEC PGGTSYDPVTLEQGLTHDPVFETWANLVNNIQGDAGMSLKNYRKDIIINVLNLQGKVAIS CCCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHEEEEEEECCCCEEEEH YKLYRAWVSDYQALPDLDAGNMNTIGIQTITLQHEGWERDTSVAEPAET HHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA