Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is epsL [H]
Identifier: 304570570
GI number: 304570570
Start: 1495459
End: 1496058
Strand: Direct
Name: epsL [H]
Synonym: NA
Alternate gene names: 304570570
Gene position: 1495459-1496058 (Clockwise)
Preceding gene: 78222549
Following gene: 78222551
Centisome position: 37.41
GC content: 52.0
Gene sequence:
>600_bases ATGTTGAATTTTGAATTTGTCTCACGGGCAGGATCCCACATGAAAAGAGTATTCGATTTAGTTCTGTCATTTCTGCTGAT GCTGGTTTTTTCTCTTCCGATGCTCGTGACGGCTCTCCTGGTGAAATTGACCTCAAGGGGGCCGATACTCTACTGGTCAG ACCGGGTGGGTAGGAACAACGCCATCTTCAGAATGCCCAAATTCCGCACTATGCGCACTGATACCCCGGCAGTGGCAACC CATCTCCTCAGCGACCCTGACCGCTGGCTGACCCCCATCGGTAAATTCCTCCGCAAAACCAGCCTTGACGAATTACCGCA GCTGTATAGCATTCTGAGGGGGGACATGAGTTTTGTCGGCCCAAGACCTGCATTGTTCAATCAGGACGATCTCGTTGCCC TGCGGACCGAGAAGGGGGTTCATCGGCTTACCCCTGGCCTGACCGGCTGGGCACAGATCAATGGCCGCGATGAATTGCCC ATACCTGTCAAGGTCGAGTACGACGCATACTATTTGCAGAACCGCTCTCTTTTCTTCGACCTGAAAATAATGATTTTGAC TGCAATCAAGGTGTTACGCCGCGATGGTGTGACCCACTAA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: sugar transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
NA
Sequences:
>Translated_199_residues MLNFEFVSRAGSHMKRVFDLVLSFLLMLVFSLPMLVTALLVKLTSRGPILYWSDRVGRNNAIFRMPKFRTMRTDTPAVAT HLLSDPDRWLTPIGKFLRKTSLDELPQLYSILRGDMSFVGPRPALFNQDDLVALRTEKGVHRLTPGLTGWAQINGRDELP IPVKVEYDAYYLQNRSLFFDLKIMILTAIKVLRRDGVTH >Mature_199_residues MLNFEFVSRAGSHMKRVFDLVLSFLLMLVFSLPMLVTALLVKLTSRGPILYWSDRVGRNNAIFRMPKFRTMRTDTPAVAT HLLSDPDRWLTPIGKFLRKTSLDELPQLYSILRGDMSFVGPRPALFNQDDLVALRTEKGVHRLTPGLTGWAQINGRDELP IPVKVEYDAYYLQNRSLFFDLKIMILTAIKVLRRDGVTH
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial sugar transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788360, Length=185, Percent_Identity=39.4594594594595, Blast_Score=125, Evalue=3e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003362 [H]
Pfam domain/function: PF02397 Bac_transf [H]
EC number: NA
Molecular weight: Translated: 22850; Mature: 22850
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNFEFVSRAGSHMKRVFDLVLSFLLMLVFSLPMLVTALLVKLTSRGPILYWSDRVGRNN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC AIFRMPKFRTMRTDTPAVATHLLSDPDRWLTPIGKFLRKTSLDELPQLYSILRGDMSFVG CEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCC PRPALFNQDDLVALRTEKGVHRLTPGLTGWAQINGRDELPIPVKVEYDAYYLQNRSLFFD CCCCCCCCCCEEEEECCCCHHHHCCCCCCEEEECCCCCCCCCEEEECCEEEEECCCEEEH LKIMILTAIKVLRRDGVTH HHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLNFEFVSRAGSHMKRVFDLVLSFLLMLVFSLPMLVTALLVKLTSRGPILYWSDRVGRNN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC AIFRMPKFRTMRTDTPAVATHLLSDPDRWLTPIGKFLRKTSLDELPQLYSILRGDMSFVG CEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCC PRPALFNQDDLVALRTEKGVHRLTPGLTGWAQINGRDELPIPVKVEYDAYYLQNRSLFFD CCCCCCCCCCEEEEECCCCHHHHCCCCCCEEEECCCCCCCCCEEEECCEEEEECCCEEEH LKIMILTAIKVLRRDGVTH HHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]