| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is 78188489
Identifier: 78188489
GI number: 78188489
Start: 596824
End: 598278
Strand: Reverse
Name: 78188489
Synonym: Cag_0511
Alternate gene names: NA
Gene position: 598278-596824 (Counterclockwise)
Preceding gene: 78188503
Following gene: 78188488
Centisome position: 23.26
GC content: 49.28
Gene sequence:
>1455_bases ATGATTGCCGAACACCTCCTTTTCCACTCCGATGGTGGCTTTATTCGCATTCCTGTGTGGGGGCACATTCCCCTCAGCAA GCCGCTTAAAAGCATTCTCTCACACCCTCTTTTTTTGCGCTTAAAGGGTATTCGCCAGCTCTCGTTTTCGCAGCAGGTCT ATCCGGGCGCAACCCACACTCGCTTTGAGCACTCGGTTGGCGTTTATCATTTAATGAAGCTCATTTTGCAGCGAATGGTT ACCAGCTCGTTAGCACAAAAGCTGCAAACGGAGCACTTCCGTTTTGATGATGCAAGTTGTCGTTTGTTGCTTGCTTCAGC GCTGTTGCACGATATTGGGCACTTTCCCCATGCTCATATTATTGAGGAGCAAATTCCTCGTGTTGGCAACGAAGTGGTTT TTTCGCATCACGAGGAGCTGTGTCGTTATTTTTTGGAGGAAGAGCACCCCAACCATCCCTCGTTGGCAACGTTGCTGATG GAAGAGTGGCGGGTTGATCCGAACGATGTGGTGGCGCTGATTAGTGGCAAGCATCGTTTGAGCAAGCTTATTAGCGGCAC GCTTGACCCCGATAAAATGGATTACCTCATGCGCGATGCTCACCATTGCAACATCCCGTATGGCAGCATTGATATTGAGC GACTTATTGAATCCTTTGTGCCCGACCCTGAGCGCCAACGTTTTGCCATTACTGAAAAAGGGATTGCCCCGCTTGAGAGT TTGCTCTTTGCGAAGTACATGATGATGCGCAACGTCTATTGGCATCACACCAGTCGGGCGCTCTCGGCAATGTTGCGGCG CTTGCTGCAAGATATTGCTGAAGCTGAGTTGCTCCCTGCGGCAACCTTGCGCGAACTCTTTTACCGCAATGCCGACGACC GTGTGCTCTATGAATTAAAGCTTCTGCTGCCCGAAGCAACCCATCCGCTTGTGGCACTTTTGGAGGATGTGCTGATGCGC CGTGTCTATAAACGTGCTATTACGGTTCAACCTTATCTGCAAAGTTCGGGCAAAGAGGATGAGCGCTGGTTCCTTTATAG CAACAACAGCGCTTTGCGCCGCTCAATGGAGGTAGAAATTTGCGAACTGCTCAACAAACGCTATCAGCTTAATCTGCACG GTTATGAAGTGCTGATTGATTCCCCATCGCGCAAAGATATTTTCGATTATGCCGATTTACAGGAATTGCGCGTCTATCCA ACTCGATCGGAGCACATCCACTACGCCATGCACTGTGCATCCGAATATGTTCGATTTGATGAGCTCAATGAATCAGTCTT TCAATCAAACTTCATTCTCTCCTTTGAACGCTACACCAAAAAATTCCGTCTGCTCTGCCGTCCCGACCTTGTTGCGCACA TTGTGGAGTTACGCCACGATATTATGAGCCTGTTAGCGCACGATTATCCGCTGTTTCACTCCACCGTCTCATCCTCAGCA ACCGAACATTCATAA
Upstream 100 bases:
>100_bases AAAAAGTCTCTTGTGTTAATACCAAGAATATTGCACCCCCAACATGGATATGCAAACGCTTTTTTATGCTACCTTTAAGC AAACTTTTTTCCGTTAGCTT
Downstream 100 bases:
>100_bases TGAGCAACGCCCCGAGACGCTTTCACTTTATTGTTAACCCAGCAGCAAATAAAGGACGTGCCACTCGCCATATAGCCAAG CTACAACAACGCTTGTTGGG
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MIAEHLLFHSDGGFIRIPVWGHIPLSKPLKSILSHPLFLRLKGIRQLSFSQQVYPGATHTRFEHSVGVYHLMKLILQRMV TSSLAQKLQTEHFRFDDASCRLLLASALLHDIGHFPHAHIIEEQIPRVGNEVVFSHHEELCRYFLEEEHPNHPSLATLLM EEWRVDPNDVVALISGKHRLSKLISGTLDPDKMDYLMRDAHHCNIPYGSIDIERLIESFVPDPERQRFAITEKGIAPLES LLFAKYMMMRNVYWHHTSRALSAMLRRLLQDIAEAELLPAATLRELFYRNADDRVLYELKLLLPEATHPLVALLEDVLMR RVYKRAITVQPYLQSSGKEDERWFLYSNNSALRRSMEVEICELLNKRYQLNLHGYEVLIDSPSRKDIFDYADLQELRVYP TRSEHIHYAMHCASEYVRFDELNESVFQSNFILSFERYTKKFRLLCRPDLVAHIVELRHDIMSLLAHDYPLFHSTVSSSA TEHS
Sequences:
>Translated_484_residues MIAEHLLFHSDGGFIRIPVWGHIPLSKPLKSILSHPLFLRLKGIRQLSFSQQVYPGATHTRFEHSVGVYHLMKLILQRMV TSSLAQKLQTEHFRFDDASCRLLLASALLHDIGHFPHAHIIEEQIPRVGNEVVFSHHEELCRYFLEEEHPNHPSLATLLM EEWRVDPNDVVALISGKHRLSKLISGTLDPDKMDYLMRDAHHCNIPYGSIDIERLIESFVPDPERQRFAITEKGIAPLES LLFAKYMMMRNVYWHHTSRALSAMLRRLLQDIAEAELLPAATLRELFYRNADDRVLYELKLLLPEATHPLVALLEDVLMR RVYKRAITVQPYLQSSGKEDERWFLYSNNSALRRSMEVEICELLNKRYQLNLHGYEVLIDSPSRKDIFDYADLQELRVYP TRSEHIHYAMHCASEYVRFDELNESVFQSNFILSFERYTKKFRLLCRPDLVAHIVELRHDIMSLLAHDYPLFHSTVSSSA TEHS >Mature_484_residues MIAEHLLFHSDGGFIRIPVWGHIPLSKPLKSILSHPLFLRLKGIRQLSFSQQVYPGATHTRFEHSVGVYHLMKLILQRMV TSSLAQKLQTEHFRFDDASCRLLLASALLHDIGHFPHAHIIEEQIPRVGNEVVFSHHEELCRYFLEEEHPNHPSLATLLM EEWRVDPNDVVALISGKHRLSKLISGTLDPDKMDYLMRDAHHCNIPYGSIDIERLIESFVPDPERQRFAITEKGIAPLES LLFAKYMMMRNVYWHHTSRALSAMLRRLLQDIAEAELLPAATLRELFYRNADDRVLYELKLLLPEATHPLVALLEDVLMR RVYKRAITVQPYLQSSGKEDERWFLYSNNSALRRSMEVEICELLNKRYQLNLHGYEVLIDSPSRKDIFDYADLQELRVYP TRSEHIHYAMHCASEYVRFDELNESVFQSNFILSFERYTKKFRLLCRPDLVAHIVELRHDIMSLLAHDYPLFHSTVSSSA TEHS
Specific function: Unknown
COG id: COG1078
COG function: function code R; HD superfamily phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
Organism=Homo sapiens, GI38016914, Length=280, Percent_Identity=26.7857142857143, Blast_Score=87, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003607 - InterPro: IPR006675 - InterPro: IPR011991 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56508; Mature: 56508
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAEHLLFHSDGGFIRIPVWGHIPLSKPLKSILSHPLFLRLKGIRQLSFSQQVYPGATHT CCCCCEEEECCCCEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCC RFEHSVGVYHLMKLILQRMVTSSLAQKLQTEHFRFDDASCRLLLASALLHDIGHFPHAHI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHH IEEQIPRVGNEVVFSHHEELCRYFLEEEHPNHPSLATLLMEEWRVDPNDVVALISGKHRL HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHEEEEECCHHHH SKLISGTLDPDKMDYLMRDAHHCNIPYGSIDIERLIESFVPDPERQRFAITEKGIAPLES HHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCHHHHHH LLFAKYMMMRNVYWHHTSRALSAMLRRLLQDIAEAELLPAATLRELFYRNADDRVLYELK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHH LLLPEATHPLVALLEDVLMRRVYKRAITVQPYLQSSGKEDERWFLYSNNSALRRSMEVEI HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEECCHHHHHHHHHHH CELLNKRYQLNLHGYEVLIDSPSRKDIFDYADLQELRVYPTRSEHIHYAMHCASEYVRFD HHHHCHHEEEEECCEEEEECCCCCCCHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHH ELNESVFQSNFILSFERYTKKFRLLCRPDLVAHIVELRHDIMSLLAHDYPLFHSTVSSSA HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC TEHS CCCC >Mature Secondary Structure MIAEHLLFHSDGGFIRIPVWGHIPLSKPLKSILSHPLFLRLKGIRQLSFSQQVYPGATHT CCCCCEEEECCCCEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCC RFEHSVGVYHLMKLILQRMVTSSLAQKLQTEHFRFDDASCRLLLASALLHDIGHFPHAHI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHH IEEQIPRVGNEVVFSHHEELCRYFLEEEHPNHPSLATLLMEEWRVDPNDVVALISGKHRL HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHEEEEECCHHHH SKLISGTLDPDKMDYLMRDAHHCNIPYGSIDIERLIESFVPDPERQRFAITEKGIAPLES HHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCHHHHHH LLFAKYMMMRNVYWHHTSRALSAMLRRLLQDIAEAELLPAATLRELFYRNADDRVLYELK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHH LLLPEATHPLVALLEDVLMRRVYKRAITVQPYLQSSGKEDERWFLYSNNSALRRSMEVEI HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEECCHHHHHHHHHHH CELLNKRYQLNLHGYEVLIDSPSRKDIFDYADLQELRVYPTRSEHIHYAMHCASEYVRFD HHHHCHHEEEEECCEEEEECCCCCCCHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHH ELNESVFQSNFILSFERYTKKFRLLCRPDLVAHIVELRHDIMSLLAHDYPLFHSTVSSSA HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC TEHS CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]