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The map label for this gene is yrbH [C]

Identifier: 78188445

GI number: 78188445

Start: 548723

End: 549709

Strand: Reverse

Name: yrbH [C]

Synonym: Cag_0467

Alternate gene names: 78188445

Gene position: 549709-548723 (Counterclockwise)

Preceding gene: 78188448

Following gene: 78188442

Centisome position: 21.37

GC content: 49.95

Gene sequence:

>987_bases
ATGAATACCACACCACAAACAGAAACAGCAACGCTAACAGGCATCGGTAGGCAAATTCTTGAGCAAGAAGCCCAAGCAAT
AGCCCATATAGCCGAGCATCTCGACCACCATTTTGCCGAAGCCATTCAGGTAATGGTTGCTTGTAAAGGCAAGGTTATTG
TATCGGGCATGGGCAAATCGGGCATTATTGCTCAAAAAATAGCCGCAACCATGGCATCTACTGGCACTACGGCGCTCTTT
CTCCATCCCGCTGATGCCGCTCATGGTGACCTTGGCGTGGTAGCGGCTGAGGATGTTGTGCTATGCCTCTCAAAAAGCGG
CTCTACCGAAGAGCTTAATTTTATTATTCCACCCTTGCGCCAACTTGGAGCAAAAATTATTGTGATGACGGGTAACCCTC
GCTCGTTTCTTGCTCAAAATGCCGACATCACCTTAAACACAGGCGTAGCAAAAGAGGCGTGCCCTTACGATTTAGCCCCC
ACCACCTCCACCACCGCTATGCTCGCTATGGGCGATGCTCTTGCCATTACCCTTATGCAGCAAAAAAAGTTCACCCAGCA
CGACTTTGCCCTCACCCACCCTAAAGGCTCTCTTGGACGCCGCTTAACGGTAAAGGTAAGCGACATTATGGCTACCGAAA
ACGCCGTGCCAATGGTACGTACCAATGCAGCGGTAACCGAATTAATTTTAGAGATGACCTCCAAACGCTATGGGGTAAGT
GCGGTGGTTAATGAGAATGGAGAGCTTGCAGGAATTTTCACTGATGGCGATTTACGCCGATTGGTACAAAGCGGACGAAA
ATTTCTCGCGCTACAAGCAGGCGAGGTTATGACGGCGCGTCCCAAAACCGTTCCCCCCGATATGTTAGCGCGTGAGTGCC
TCGATATTCTTGAGGAATACCGTATTACGCAGCTCCTTGTGTGCGATAACCATCAACGCCCCATTGGAGTGGTTCACATC
CACGATTTATTGACGTTGGGGCTGTAA

Upstream 100 bases:

>100_bases
AGATTATATTTATAGGAAATGATAGTTAAGCGCAATGTACCCCATATTGAGCGCTTGAACAATAAGAACCCCAAACTCCC
CTTTTTTAATTCCTCCCTCT

Downstream 100 bases:

>100_bases
TTAAGAGAACAAAAAAAAGCCCTGTTAGCATACAACCAACAGGGCTTTGGTACAAAACATCTATCGCCAATAAAAAGGAG
CGGAAGGATTATCTGCCAAG

Product: KpsF/GutQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MNTTPQTETATLTGIGRQILEQEAQAIAHIAEHLDHHFAEAIQVMVACKGKVIVSGMGKSGIIAQKIAATMASTGTTALF
LHPADAAHGDLGVVAAEDVVLCLSKSGSTEELNFIIPPLRQLGAKIIVMTGNPRSFLAQNADITLNTGVAKEACPYDLAP
TTSTTAMLAMGDALAITLMQQKKFTQHDFALTHPKGSLGRRLTVKVSDIMATENAVPMVRTNAAVTELILEMTSKRYGVS
AVVNENGELAGIFTDGDLRRLVQSGRKFLALQAGEVMTARPKTVPPDMLARECLDILEEYRITQLLVCDNHQRPIGVVHI
HDLLTLGL

Sequences:

>Translated_328_residues
MNTTPQTETATLTGIGRQILEQEAQAIAHIAEHLDHHFAEAIQVMVACKGKVIVSGMGKSGIIAQKIAATMASTGTTALF
LHPADAAHGDLGVVAAEDVVLCLSKSGSTEELNFIIPPLRQLGAKIIVMTGNPRSFLAQNADITLNTGVAKEACPYDLAP
TTSTTAMLAMGDALAITLMQQKKFTQHDFALTHPKGSLGRRLTVKVSDIMATENAVPMVRTNAAVTELILEMTSKRYGVS
AVVNENGELAGIFTDGDLRRLVQSGRKFLALQAGEVMTARPKTVPPDMLARECLDILEEYRITQLLVCDNHQRPIGVVHI
HDLLTLGL
>Mature_328_residues
MNTTPQTETATLTGIGRQILEQEAQAIAHIAEHLDHHFAEAIQVMVACKGKVIVSGMGKSGIIAQKIAATMASTGTTALF
LHPADAAHGDLGVVAAEDVVLCLSKSGSTEELNFIIPPLRQLGAKIIVMTGNPRSFLAQNADITLNTGVAKEACPYDLAP
TTSTTAMLAMGDALAITLMQQKKFTQHDFALTHPKGSLGRRLTVKVSDIMATENAVPMVRTNAAVTELILEMTSKRYGVS
AVVNENGELAGIFTDGDLRRLVQSGRKFLALQAGEVMTARPKTVPPDMLARECLDILEEYRITQLLVCDNHQRPIGVVHI
HDLLTLGL

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=313, Percent_Identity=45.6869009584665, Blast_Score=287, Evalue=8e-79,
Organism=Escherichia coli, GI87082151, Length=317, Percent_Identity=41.9558359621451, Blast_Score=243, Evalue=2e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 35122; Mature: 35122

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTPQTETATLTGIGRQILEQEAQAIAHIAEHLDHHFAEAIQVMVACKGKVIVSGMGKS
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC
GIIAQKIAATMASTGTTALFLHPADAAHGDLGVVAAEDVVLCLSKSGSTEELNFIIPPLR
CHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCEEEEECCCCCCCEEEEEECCHH
QLGAKIIVMTGNPRSFLAQNADITLNTGVAKEACPYDLAPTTSTTAMLAMGDALAITLMQ
HCCCEEEEEECCCHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEEHEEECCHHEEEEHH
QKKFTQHDFALTHPKGSLGRRLTVKVSDIMATENAVPMVRTNAAVTELILEMTSKRYGVS
HHCCCCCCEEEECCCCCCCCEEEEEEHHHEECCCCCCEEECHHHHHHHHHHHHHCCCCEE
AVVNENGELAGIFTDGDLRRLVQSGRKFLALQAGEVMTARPKTVPPDMLARECLDILEEY
EEEECCCCEEEEEECHHHHHHHHCCCEEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHH
RITQLLVCDNHQRPIGVVHIHDLLTLGL
CCEEEEEECCCCCCEEEEEHHHHHHHCC
>Mature Secondary Structure
MNTTPQTETATLTGIGRQILEQEAQAIAHIAEHLDHHFAEAIQVMVACKGKVIVSGMGKS
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC
GIIAQKIAATMASTGTTALFLHPADAAHGDLGVVAAEDVVLCLSKSGSTEELNFIIPPLR
CHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCEEEEECCCCCCCEEEEEECCHH
QLGAKIIVMTGNPRSFLAQNADITLNTGVAKEACPYDLAPTTSTTAMLAMGDALAITLMQ
HCCCEEEEEECCCHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEEHEEECCHHEEEEHH
QKKFTQHDFALTHPKGSLGRRLTVKVSDIMATENAVPMVRTNAAVTELILEMTSKRYGVS
HHCCCCCCEEEECCCCCCCCEEEEEEHHHEECCCCCCEEECHHHHHHHHHHHHHCCCCEE
AVVNENGELAGIFTDGDLRRLVQSGRKFLALQAGEVMTARPKTVPPDMLARECLDILEEY
EEEECCCCEEEEEECHHHHHHHHCCCEEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHH
RITQLLVCDNHQRPIGVVHIHDLLTLGL
CCEEEEEECCCCCCEEEEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]