Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
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Accession | NC_007514 |
Length | 2,572,079 |
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The map label for this gene is bchX [H]
Identifier: 78188378
GI number: 78188378
Start: 464414
End: 465523
Strand: Reverse
Name: bchX [H]
Synonym: Cag_0400
Alternate gene names: 78188378
Gene position: 465523-464414 (Counterclockwise)
Preceding gene: 78188379
Following gene: 78188377
Centisome position: 18.1
GC content: 49.1
Gene sequence:
>1110_bases ATGAAAGCAAGAACCATAGCGATTTACGGCAAAGGTGGAATAGGTAAAAGCTTTACCACCACCAATCTTAGCGCCACCTT TGCCAGGATGAATAAGCGCGTGCTTCAGCTTGGTTGCGATCCCAAACACGACTCCACCACCTCGCTGTTTGGCGGCATTT CGCTGCCAACCGTAACCGATGTGTTTGCGGCAAAAAATGCTAAAAACGAGCAAGTAGCCATTAGCGACATTGTTTTTCGC CGCGATATTGAAGGCTTTCCTCAACCAATTTATGGCATTGAACTTGGCGGTCCACAAGTTGGGCGCGGTTGCGGTGGACG CGGCATTATTTCAGGTTTTGATGTGCTTGAAAAGCTCGGCATGTTCCAATGGGATATTGATATTATTCTTATGGATTTTC TGGGCGATGTAGTGTGTGGAGGTTTTGCAACGCCGCTTGCCCGCTCACTTAGCGAAGAGGTAATTCTTGTAACCAGCAAC GATCGTCAAGCTATTTTTACAGCGAACAACATCTGCCAAGCAAATAACTACTTCCGCACCATTGGCGGTGAATCGCACCT GCTTGGTATGATTATCAATCGTGATGATGGTAGCGGTGTTGCTGAAAACTACGCACAAGCCGCAGGCATTAACGTGCTGA TGAAAGTGCCCTACAACATGGAGGCACGCGACCGCGATGACAGCTTCGACTTTGCTATAAAACTCCCCGAGCTTCGCGAC AAATTCCAAAAGCTTGCAACCGATATTCTTGAAAAGCGCATTGCCCCCAGCAACGCCACAGGGCTTGATTTCAACGACTT TGTGCGCCTTTTTGGCGACGTGAAAAACGAAGCGCCTCGTCCCGCTAAAGCCGATGAGCTTTTTGCATCACAACCCGCAG GCAACAACGCATCCACCACCACTCATTCTACCCAAGAGAGCGACCAGCAAAAAATGGAGCGCTGCATCGCTTGTCTTGAA CCCATCCAGCAACAACTTTACCGCCTCGCTGAGCTTGAGAAAAAAAGCCTCACCGACATTGCATCCCTTACCAATCTTGA CGAAACCACCATCAGCGAAACGCTTACACGCGCCCGCAAACAGCTCAAACGCATGTTTTTTGAGGGATAA
Upstream 100 bases:
>100_bases CCTTCGGGATTAAAAACAAAAGAGTCTATTTCAAGATGTTGTAAAATCACAGCACTTGCTAAACTCAAGCGATAACAAGA GTTTCTTAGGAATTCAGCTT
Downstream 100 bases:
>100_bases AAGACAAGAGAATCAGTACCATTAAAAATTCGTCATTGTTACGGTGAGTTATATTGTACAACTAAAACGGCAACAAGCTT TGCACACCCAACCATCGTCT
Product: chlorophyllide reductase iron protein subunit X
Products: NA
Alternate protein names: Chlorin reductase [H]
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MKARTIAIYGKGGIGKSFTTTNLSATFARMNKRVLQLGCDPKHDSTTSLFGGISLPTVTDVFAAKNAKNEQVAISDIVFR RDIEGFPQPIYGIELGGPQVGRGCGGRGIISGFDVLEKLGMFQWDIDIILMDFLGDVVCGGFATPLARSLSEEVILVTSN DRQAIFTANNICQANNYFRTIGGESHLLGMIINRDDGSGVAENYAQAAGINVLMKVPYNMEARDRDDSFDFAIKLPELRD KFQKLATDILEKRIAPSNATGLDFNDFVRLFGDVKNEAPRPAKADELFASQPAGNNASTTTHSTQESDQQKMERCIACLE PIQQQLYRLAELEKKSLTDIASLTNLDETTISETLTRARKQLKRMFFEG
Sequences:
>Translated_369_residues MKARTIAIYGKGGIGKSFTTTNLSATFARMNKRVLQLGCDPKHDSTTSLFGGISLPTVTDVFAAKNAKNEQVAISDIVFR RDIEGFPQPIYGIELGGPQVGRGCGGRGIISGFDVLEKLGMFQWDIDIILMDFLGDVVCGGFATPLARSLSEEVILVTSN DRQAIFTANNICQANNYFRTIGGESHLLGMIINRDDGSGVAENYAQAAGINVLMKVPYNMEARDRDDSFDFAIKLPELRD KFQKLATDILEKRIAPSNATGLDFNDFVRLFGDVKNEAPRPAKADELFASQPAGNNASTTTHSTQESDQQKMERCIACLE PIQQQLYRLAELEKKSLTDIASLTNLDETTISETLTRARKQLKRMFFEG >Mature_369_residues MKARTIAIYGKGGIGKSFTTTNLSATFARMNKRVLQLGCDPKHDSTTSLFGGISLPTVTDVFAAKNAKNEQVAISDIVFR RDIEGFPQPIYGIELGGPQVGRGCGGRGIISGFDVLEKLGMFQWDIDIILMDFLGDVVCGGFATPLARSLSEEVILVTSN DRQAIFTANNICQANNYFRTIGGESHLLGMIINRDDGSGVAENYAQAAGINVLMKVPYNMEARDRDDSFDFAIKLPELRD KFQKLATDILEKRIAPSNATGLDFNDFVRLFGDVKNEAPRPAKADELFASQPAGNNASTTTHSTQESDQQKMERCIACLE PIQQQLYRLAELEKKSLTDIASLTNLDETTISETLTRARKQLKRMFFEG
Specific function: Converts chlorophylls (Chl) into bacteriochlorophylls (BChl) by reducing ring B of the tetrapyrrole [H]
COG id: COG1348
COG function: function code P; Nitrogenase subunit NifH (ATPase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NifH/BchL/ChlL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010246 - InterPro: IPR000392 [H]
Pfam domain/function: PF00142 Fer4_NifH [H]
EC number: NA
Molecular weight: Translated: 40573; Mature: 40573
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: PS00746 NIFH_FRXC_1 ; PS00692 NIFH_FRXC_2 ; PS51026 NIFH_FRXC_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKARTIAIYGKGGIGKSFTTTNLSATFARMNKRVLQLGCDPKHDSTTSLFGGISLPTVTD CCCEEEEEEECCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHH VFAAKNAKNEQVAISDIVFRRDIEGFPQPIYGIELGGPQVGRGCGGRGIISGFDVLEKLG HHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCC MFQWDIDIILMDFLGDVVCGGFATPLARSLSEEVILVTSNDRQAIFTANNICQANNYFRT CCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCEEEEEECCCHHCCCEEEE IGGESHLLGMIINRDDGSGVAENYAQAAGINVLMKVPYNMEARDRDDSFDFAIKLPELRD CCCCCEEEEEEEECCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEECHHHHH KFQKLATDILEKRIAPSNATGLDFNDFVRLFGDVKNEAPRPAKADELFASQPAGNNASTT HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCC THSTQESDQQKMERCIACLEPIQQQLYRLAELEKKSLTDIASLTNLDETTISETLTRARK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH QLKRMFFEG HHHHHHCCC >Mature Secondary Structure MKARTIAIYGKGGIGKSFTTTNLSATFARMNKRVLQLGCDPKHDSTTSLFGGISLPTVTD CCCEEEEEEECCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHH VFAAKNAKNEQVAISDIVFRRDIEGFPQPIYGIELGGPQVGRGCGGRGIISGFDVLEKLG HHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCC MFQWDIDIILMDFLGDVVCGGFATPLARSLSEEVILVTSNDRQAIFTANNICQANNYFRT CCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCEEEEEECCCHHCCCEEEE IGGESHLLGMIINRDDGSGVAENYAQAAGINVLMKVPYNMEARDRDDSFDFAIKLPELRD CCCCCEEEEEEEECCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEECHHHHH KFQKLATDILEKRIAPSNATGLDFNDFVRLFGDVKNEAPRPAKADELFASQPAGNNASTT HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCC THSTQESDQQKMERCIACLEPIQQQLYRLAELEKKSLTDIASLTNLDETTISETLTRARK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH QLKRMFFEG HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8437569; 10648776 [H]