Definition Chlorobium chlorochromatii CaD3 chromosome, complete genome.
Accession NC_007514
Length 2,572,079

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The map label for this gene is 78188377

Identifier: 78188377

GI number: 78188377

Start: 463906

End: 464202

Strand: Reverse

Name: 78188377

Synonym: Cag_0399

Alternate gene names: NA

Gene position: 464202-463906 (Counterclockwise)

Preceding gene: 78188378

Following gene: 78188376

Centisome position: 18.05

GC content: 47.14

Gene sequence:

>297_bases
ATGAAACAGATTAAAATTCTTGGCAGCGGCTGCGCTAAATGCAATCAACTTGCTGATGTTGTAAAAAACGTGGTTGCTCA
AGAGGGCATTGACGCTTCGGTTGAAAAGGTTGAGGATATCCAGCAAATCATGGCATACAATGTTATGACAACGCCTGCGC
TTGTGGTGGATGAGCAAGTAGTCTGCAAAGGGCGCATTCCTTCCCAAAGCGAAGTAAAAGAGATGCTTACGGCACCAGCA
AAAGGGTGCTGCTGCGGTGGCGGAAAAAGTACAGGCAATCCAACCGGATGCTGTTAA

Upstream 100 bases:

>100_bases
ACATTGAATGTGATATATTAGAGAGTTGGCAATTGTTTACTAACCCGCCTCACAACAAATAAAGGGCGTGAAGGCACAAA
AATTCAGAGGAGTAACAACA

Downstream 100 bases:

>100_bases
TGAAACGTTATCAATGGCTTGGGCAACTTGTAGCCACAACCCTACTCTGGTTGTTGCTCTACAATAATTTAGAGTTGGGT
GCCGACCAGTTGCTCAGGCT

Product: redox-active disulfide protein 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MKQIKILGSGCAKCNQLADVVKNVVAQEGIDASVEKVEDIQQIMAYNVMTTPALVVDEQVVCKGRIPSQSEVKEMLTAPA
KGCCCGGGKSTGNPTGCC

Sequences:

>Translated_98_residues
MKQIKILGSGCAKCNQLADVVKNVVAQEGIDASVEKVEDIQQIMAYNVMTTPALVVDEQVVCKGRIPSQSEVKEMLTAPA
KGCCCGGGKSTGNPTGCC
>Mature_98_residues
MKQIKILGSGCAKCNQLADVVKNVVAQEGIDASVEKVEDIQQIMAYNVMTTPALVVDEQVVCKGRIPSQSEVKEMLTAPA
KGCCCGGGKSTGNPTGCC

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glutaredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003501
- InterPro:   IPR005243
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02302 PTS_IIB [H]

EC number: NA

Molecular weight: Translated: 10219; Mature: 10219

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
12.2 %Cys+Met (Translated Protein)
8.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
12.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQIKILGSGCAKCNQLADVVKNVVAQEGIDASVEKVEDIQQIMAYNVMTTPALVVDEQV
CCCEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCHH
VCKGRIPSQSEVKEMLTAPAKGCCCGGGKSTGNPTGCC
HCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKQIKILGSGCAKCNQLADVVKNVVAQEGIDASVEKVEDIQQIMAYNVMTTPALVVDEQV
CCCEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCHH
VCKGRIPSQSEVKEMLTAPAKGCCCGGGKSTGNPTGCC
HCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]