Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
---|---|
Accession | NC_007514 |
Length | 2,572,079 |
Click here to switch to the map view.
The map label for this gene is 78188377
Identifier: 78188377
GI number: 78188377
Start: 463906
End: 464202
Strand: Reverse
Name: 78188377
Synonym: Cag_0399
Alternate gene names: NA
Gene position: 464202-463906 (Counterclockwise)
Preceding gene: 78188378
Following gene: 78188376
Centisome position: 18.05
GC content: 47.14
Gene sequence:
>297_bases ATGAAACAGATTAAAATTCTTGGCAGCGGCTGCGCTAAATGCAATCAACTTGCTGATGTTGTAAAAAACGTGGTTGCTCA AGAGGGCATTGACGCTTCGGTTGAAAAGGTTGAGGATATCCAGCAAATCATGGCATACAATGTTATGACAACGCCTGCGC TTGTGGTGGATGAGCAAGTAGTCTGCAAAGGGCGCATTCCTTCCCAAAGCGAAGTAAAAGAGATGCTTACGGCACCAGCA AAAGGGTGCTGCTGCGGTGGCGGAAAAAGTACAGGCAATCCAACCGGATGCTGTTAA
Upstream 100 bases:
>100_bases ACATTGAATGTGATATATTAGAGAGTTGGCAATTGTTTACTAACCCGCCTCACAACAAATAAAGGGCGTGAAGGCACAAA AATTCAGAGGAGTAACAACA
Downstream 100 bases:
>100_bases TGAAACGTTATCAATGGCTTGGGCAACTTGTAGCCACAACCCTACTCTGGTTGTTGCTCTACAATAATTTAGAGTTGGGT GCCGACCAGTTGCTCAGGCT
Product: redox-active disulfide protein 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MKQIKILGSGCAKCNQLADVVKNVVAQEGIDASVEKVEDIQQIMAYNVMTTPALVVDEQVVCKGRIPSQSEVKEMLTAPA KGCCCGGGKSTGNPTGCC
Sequences:
>Translated_98_residues MKQIKILGSGCAKCNQLADVVKNVVAQEGIDASVEKVEDIQQIMAYNVMTTPALVVDEQVVCKGRIPSQSEVKEMLTAPA KGCCCGGGKSTGNPTGCC >Mature_98_residues MKQIKILGSGCAKCNQLADVVKNVVAQEGIDASVEKVEDIQQIMAYNVMTTPALVVDEQVVCKGRIPSQSEVKEMLTAPA KGCCCGGGKSTGNPTGCC
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutaredoxin family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003501 - InterPro: IPR005243 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF02302 PTS_IIB [H]
EC number: NA
Molecular weight: Translated: 10219; Mature: 10219
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 12.2 %Cys+Met (Translated Protein) 8.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 12.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQIKILGSGCAKCNQLADVVKNVVAQEGIDASVEKVEDIQQIMAYNVMTTPALVVDEQV CCCEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCHH VCKGRIPSQSEVKEMLTAPAKGCCCGGGKSTGNPTGCC HCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKQIKILGSGCAKCNQLADVVKNVVAQEGIDASVEKVEDIQQIMAYNVMTTPALVVDEQV CCCEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCHH VCKGRIPSQSEVKEMLTAPAKGCCCGGGKSTGNPTGCC HCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]