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The map label for this gene is 78188229

Identifier: 78188229

GI number: 78188229

Start: 279486

End: 280682

Strand: Reverse

Name: 78188229

Synonym: Cag_0248

Alternate gene names: NA

Gene position: 280682-279486 (Counterclockwise)

Preceding gene: 78188230

Following gene: 78188228

Centisome position: 10.91

GC content: 47.12

Gene sequence:

>1197_bases
ATGATGCAGAATGATGTTGTGGTGGTTGGCGGTGGTATTAGCGGTCTCTCTCTTGCCTATTATGCGGTAAAGAGCGGCTT
AAAAACCACGCTGCTTGAAAAAAATGAAACGCTTGGTGGCTCTTTTGCCTCCCCACGCTACAAGTCGGGTGGCAAAGAGT
TTTGGATGGAACTTGGGGCGCACACTTGTTATAGCTCCTATCAAAATTTGCTCTCCATTGTTGAAGAGTGTGGCATTATG
GACACCATTATCCCTCGTGCCAAAGTGCCTTTTACGCTGCTGATTGATGGCGAAATTAAATCGCTGATGTCGCAGCTCCA
TATTATGGAGTTGTTAACGAATGGTCCCTCTATTTTCTCCCTTAAAAAAGAGGGGCAAACGGTGCGCTCGTACTATGAAA
AAATAGTTGGAAAACGCAACTACAGCGAAGTTATCAGCCACTTTTTTAATGCCGTGCCTTCGCAAAAAACCGATGACTTC
CCTGCTGAAATGATGTTTAAGAGCCGTCCAAAACGGAAAGATGTGCTCAAAAATTACACCTTTAAACATGGTTTACAAGG
AGTAGCCGAAACCATTGCAGCAACTCGCGGCTTAAATGTTTTTACAGGGCAGGATATTGTAAACATTAGCATGGACAACG
GAAATTACGTTGTAAGCGCCAGCAACGGTGTAAGTTATGCGGCAAAAACGTTAGTAATGGCAACCCCTTCAGCCATAAGC
GCCAAGCTGCTCCAAGAGGTTAATGGCGACTTAGCGGCGCATCTCAGCAAACTGAAAGCTGCCACAGTGGATTCCATTGG
CGTGGTAGTTCCAAAAGATGCCATCAACATAAAGCCCGTTGCGGCTATTATTTCCCCCAACGATATCTTCTTTTCAGTGG
TGGCACGCGATACGGTGCCTGACGATAATTATCGTGGCTTTGCTTTCCACTTCCGTCCGGGGTTGGATGACCGCACCAAG
CGCGATCGCATTGCGGCGGTGTTGGGCATTAATTTTTCAAAGGTTGAACATACCGTGTCGCGCTTAAATACCGTGCCATC
GTTGCGGCTTGGGCATAACGCATGGCTTGAACAAACCAATGCGTTGCTAAAAAATAACCGTTCGCTGCTCTTAACGGGGA
ACTACTTTGGCGGCATGGCAATTGAGGATTGCGTCAGCCGTTCACGCAGCGAGTTTGAGCGCCTGAGCGGTAAATAA

Upstream 100 bases:

>100_bases
CGATTTCATTACATTGCGCCAATTTTTAAAGCTCCCCTTGCCAAAACGCAAGGTTACAAGCCGAGCTTACTTGATTTTAT
TATGAAAACTCTTTTCGCTT

Downstream 100 bases:

>100_bases
TGAATGCTATTGATTGGAACACGCATGGTTGATTGGAGTTCACTACAAACCTACCTTGTCATTGCATTACTCCTCTTGCT
CTTTGCCTTAGTAGTAATGT

Product: protoporphyrinogen oxidase

Products: NA

Alternate protein names: Amine Oxidase; Protoporphyrinogen Oxidase; Protoporphyrinogen Oxidase-Like Protein

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MMQNDVVVVGGGISGLSLAYYAVKSGLKTTLLEKNETLGGSFASPRYKSGGKEFWMELGAHTCYSSYQNLLSIVEECGIM
DTIIPRAKVPFTLLIDGEIKSLMSQLHIMELLTNGPSIFSLKKEGQTVRSYYEKIVGKRNYSEVISHFFNAVPSQKTDDF
PAEMMFKSRPKRKDVLKNYTFKHGLQGVAETIAATRGLNVFTGQDIVNISMDNGNYVVSASNGVSYAAKTLVMATPSAIS
AKLLQEVNGDLAAHLSKLKAATVDSIGVVVPKDAINIKPVAAIISPNDIFFSVVARDTVPDDNYRGFAFHFRPGLDDRTK
RDRIAAVLGINFSKVEHTVSRLNTVPSLRLGHNAWLEQTNALLKNNRSLLLTGNYFGGMAIEDCVSRSRSEFERLSGK

Sequences:

>Translated_398_residues
MMQNDVVVVGGGISGLSLAYYAVKSGLKTTLLEKNETLGGSFASPRYKSGGKEFWMELGAHTCYSSYQNLLSIVEECGIM
DTIIPRAKVPFTLLIDGEIKSLMSQLHIMELLTNGPSIFSLKKEGQTVRSYYEKIVGKRNYSEVISHFFNAVPSQKTDDF
PAEMMFKSRPKRKDVLKNYTFKHGLQGVAETIAATRGLNVFTGQDIVNISMDNGNYVVSASNGVSYAAKTLVMATPSAIS
AKLLQEVNGDLAAHLSKLKAATVDSIGVVVPKDAINIKPVAAIISPNDIFFSVVARDTVPDDNYRGFAFHFRPGLDDRTK
RDRIAAVLGINFSKVEHTVSRLNTVPSLRLGHNAWLEQTNALLKNNRSLLLTGNYFGGMAIEDCVSRSRSEFERLSGK
>Mature_398_residues
MMQNDVVVVGGGISGLSLAYYAVKSGLKTTLLEKNETLGGSFASPRYKSGGKEFWMELGAHTCYSSYQNLLSIVEECGIM
DTIIPRAKVPFTLLIDGEIKSLMSQLHIMELLTNGPSIFSLKKEGQTVRSYYEKIVGKRNYSEVISHFFNAVPSQKTDDF
PAEMMFKSRPKRKDVLKNYTFKHGLQGVAETIAATRGLNVFTGQDIVNISMDNGNYVVSASNGVSYAAKTLVMATPSAIS
AKLLQEVNGDLAAHLSKLKAATVDSIGVVVPKDAINIKPVAAIISPNDIFFSVVARDTVPDDNYRGFAFHFRPGLDDRTK
RDRIAAVLGINFSKVEHTVSRLNTVPSLRLGHNAWLEQTNALLKNNRSLLLTGNYFGGMAIEDCVSRSRSEFERLSGK

Specific function: Unknown

COG id: COG3349

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43651; Mature: 43651

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQNDVVVVGGGISGLSLAYYAVKSGLKTTLLEKNETLGGSFASPRYKSGGKEFWMELGA
CCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
HTCYSSYQNLLSIVEECGIMDTIIPRAKVPFTLLIDGEIKSLMSQLHIMELLTNGPSIFS
HHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCEEE
LKKEGQTVRSYYEKIVGKRNYSEVISHFFNAVPSQKTDDFPAEMMFKSRPKRKDVLKNYT
EHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHH
FKHGLQGVAETIAATRGLNVFTGQDIVNISMDNGNYVVSASNGVSYAAKTLVMATPSAIS
HHHHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCEEEECCCCCHHHHHHHEEECCHHHH
AKLLQEVNGDLAAHLSKLKAATVDSIGVVVPKDAINIKPVAAIISPNDIFFSVVARDTVP
HHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEECCCCEEEEEEEECCCC
DDNYRGFAFHFRPGLDDRTKRDRIAAVLGINFSKVEHTVSRLNTVPSLRLGHNAWLEQTN
CCCCCEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
ALLKNNRSLLLTGNYFGGMAIEDCVSRSRSEFERLSGK
HHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMQNDVVVVGGGISGLSLAYYAVKSGLKTTLLEKNETLGGSFASPRYKSGGKEFWMELGA
CCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
HTCYSSYQNLLSIVEECGIMDTIIPRAKVPFTLLIDGEIKSLMSQLHIMELLTNGPSIFS
HHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCEEE
LKKEGQTVRSYYEKIVGKRNYSEVISHFFNAVPSQKTDDFPAEMMFKSRPKRKDVLKNYT
EHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHH
FKHGLQGVAETIAATRGLNVFTGQDIVNISMDNGNYVVSASNGVSYAAKTLVMATPSAIS
HHHHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCEEEECCCCCHHHHHHHEEECCHHHH
AKLLQEVNGDLAAHLSKLKAATVDSIGVVVPKDAINIKPVAAIISPNDIFFSVVARDTVP
HHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEECCCCEEEEEEEECCCC
DDNYRGFAFHFRPGLDDRTKRDRIAAVLGINFSKVEHTVSRLNTVPSLRLGHNAWLEQTN
CCCCCEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
ALLKNNRSLLLTGNYFGGMAIEDCVSRSRSEFERLSGK
HHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA