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The map label for this gene is yjeP [C]

Identifier: 78188228

GI number: 78188228

Start: 278397

End: 279482

Strand: Reverse

Name: yjeP [C]

Synonym: Cag_0247

Alternate gene names: 78188228

Gene position: 279482-278397 (Counterclockwise)

Preceding gene: 78188229

Following gene: 78188227

Centisome position: 10.87

GC content: 45.03

Gene sequence:

>1086_bases
ATGCTATTGATTGGAACACGCATGGTTGATTGGAGTTCACTACAAACCTACCTTGTCATTGCATTACTCCTCTTGCTCTT
TGCCTTAGTAGTAATGTTGGGTGCTAATTCGCTTTTTCAGCAGCTTGTAGTGCGCATTCGAGCCACCATGCGCGGTGTTA
GTTTGCCGTTGGAGTTGGTCGCATGGCCTTTTCGATTGCTTATGGTTTTGGCAGGAATGGCAGTATTAGCAAACAACGTT
CCCTTATCAGCACGCATTGATGTGCTTATTAAGCATAGCTTACTGATTGGTGGAATTATTGGGGTAACGTGGTTTTTAAC
CCGCCTTATGCTTGTTTTTGAGCAGGTGGTGCTTGACTACTATGCTACCAAAGTGCGCGAAAGTGAAGCTGTCCGCAAAG
TTGCCACACACATTAGCTTAGCACGTAAAATTATTGATGCTCTCTTGGTGCTTGTAGCTATTGCTGGGGCACTTATGACC
TTTGATACCGTGCGTCAGGTAGGATTAAGCATTTTAGCCTCGGCTGGTATTTTAAGTGTAATGGTTGGTTTGGCAGCACA
AAAAAGCTTAACCACCCTGATTGCGGGCGTACAAATTGCCATTACCCAACCCGTAACCATTGGCGATGAAGTGGTGGTAG
AAAATGAAAAAGGAACCATTGAGGAAATTACGCTGACCTACGTTGTAATGAAAATTTGGGATGAACGCCGTATGATTCTG
CCCATTACATGGTTTCTTGATCGCCCGTTTGAAAATTGGACGCGCACCTCGCCTGAACTACTTGGATCGGTTTTTCTCTC
TATTGACTATTTGCTTTCCCCTGACGTGTTAAGGCAGGAGCTGGAACGCCTTGTTGCTACTACCCCGCTTTGGGATGGAC
GTGTAGTAAAATTGCAAGTAACCAACTCAACGGAGCGCTCAATGGAAATTCGTGCGTTGGTAAGTGCGGCAAATGCCTCG
CAGTTATGGGATTTGCGCTGCTTAGTACGCGAAGGGCTGATTGCATTTTTACGCAACAACTATAATGACTTACTGCCACA
TCTAAATATTGAAATAGAACGTGGACGATCACCACAAAACAGATGA

Upstream 100 bases:

>100_bases
TTCGCTGCTCTTAACGGGGAACTACTTTGGCGGCATGGCAATTGAGGATTGCGTCAGCCGTTCACGCAGCGAGTTTGAGC
GCCTGAGCGGTAAATAATGA

Downstream 100 bases:

>100_bases
TTTTACATTAATAAGGTGGCTTACCATCAAACAAAAGTAAAGCTGCCACTAACAAGGAGAAGACATGGCAACAGTAAAAC
AAGGGGATACCGTAAAAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Small-Conductance Mechanosensitive Channel; Mechanosensitive Ion Channel Family Protein; Mechanosensitive Ion Channel Protein MscS; Mechanosensitive Ion Channel MscS; Mscs Mechanosensitive Ion Channel; Mechanosensitive Ion Channel; Transporter MscS Family; Small-Conductance Mechanosensitive Ion Channel; Mechanosensitive Ion Channel Domain-Containing Protein; Mechanosensitive Ion Channel Protein; MscS Mechanosensitive Ion Channel Protein; MscS Family Transporter; Small-Conductance Mechanosensitive Channel-Like Protein; Mechanosensitive Channel Protein

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MLLIGTRMVDWSSLQTYLVIALLLLLFALVVMLGANSLFQQLVVRIRATMRGVSLPLELVAWPFRLLMVLAGMAVLANNV
PLSARIDVLIKHSLLIGGIIGVTWFLTRLMLVFEQVVLDYYATKVRESEAVRKVATHISLARKIIDALLVLVAIAGALMT
FDTVRQVGLSILASAGILSVMVGLAAQKSLTTLIAGVQIAITQPVTIGDEVVVENEKGTIEEITLTYVVMKIWDERRMIL
PITWFLDRPFENWTRTSPELLGSVFLSIDYLLSPDVLRQELERLVATTPLWDGRVVKLQVTNSTERSMEIRALVSAANAS
QLWDLRCLVREGLIAFLRNNYNDLLPHLNIEIERGRSPQNR

Sequences:

>Translated_361_residues
MLLIGTRMVDWSSLQTYLVIALLLLLFALVVMLGANSLFQQLVVRIRATMRGVSLPLELVAWPFRLLMVLAGMAVLANNV
PLSARIDVLIKHSLLIGGIIGVTWFLTRLMLVFEQVVLDYYATKVRESEAVRKVATHISLARKIIDALLVLVAIAGALMT
FDTVRQVGLSILASAGILSVMVGLAAQKSLTTLIAGVQIAITQPVTIGDEVVVENEKGTIEEITLTYVVMKIWDERRMIL
PITWFLDRPFENWTRTSPELLGSVFLSIDYLLSPDVLRQELERLVATTPLWDGRVVKLQVTNSTERSMEIRALVSAANAS
QLWDLRCLVREGLIAFLRNNYNDLLPHLNIEIERGRSPQNR
>Mature_361_residues
MLLIGTRMVDWSSLQTYLVIALLLLLFALVVMLGANSLFQQLVVRIRATMRGVSLPLELVAWPFRLLMVLAGMAVLANNV
PLSARIDVLIKHSLLIGGIIGVTWFLTRLMLVFEQVVLDYYATKVRESEAVRKVATHISLARKIIDALLVLVAIAGALMT
FDTVRQVGLSILASAGILSVMVGLAAQKSLTTLIAGVQIAITQPVTIGDEVVVENEKGTIEEITLTYVVMKIWDERRMIL
PITWFLDRPFENWTRTSPELLGSVFLSIDYLLSPDVLRQELERLVATTPLWDGRVVKLQVTNSTERSMEIRALVSAANAS
QLWDLRCLVREGLIAFLRNNYNDLLPHLNIEIERGRSPQNR

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40338; Mature: 40338

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLIGTRMVDWSSLQTYLVIALLLLLFALVVMLGANSLFQQLVVRIRATMRGVSLPLELV
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHH
AWPFRLLMVLAGMAVLANNVPLSARIDVLIKHSLLIGGIIGVTWFLTRLMLVFEQVVLDY
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YATKVRESEAVRKVATHISLARKIIDALLVLVAIAGALMTFDTVRQVGLSILASAGILSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVGLAAQKSLTTLIAGVQIAITQPVTIGDEVVVENEKGTIEEITLTYVVMKIWDERRMIL
HHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEE
PITWFLDRPFENWTRTSPELLGSVFLSIDYLLSPDVLRQELERLVATTPLWDGRVVKLQV
EEHHHHCCCHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEE
TNSTERSMEIRALVSAANASQLWDLRCLVREGLIAFLRNNYNDLLPHLNIEIERGRSPQN
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEECCCCCCC
R
C
>Mature Secondary Structure
MLLIGTRMVDWSSLQTYLVIALLLLLFALVVMLGANSLFQQLVVRIRATMRGVSLPLELV
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHH
AWPFRLLMVLAGMAVLANNVPLSARIDVLIKHSLLIGGIIGVTWFLTRLMLVFEQVVLDY
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YATKVRESEAVRKVATHISLARKIIDALLVLVAIAGALMTFDTVRQVGLSILASAGILSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVGLAAQKSLTTLIAGVQIAITQPVTIGDEVVVENEKGTIEEITLTYVVMKIWDERRMIL
HHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEE
PITWFLDRPFENWTRTSPELLGSVFLSIDYLLSPDVLRQELERLVATTPLWDGRVVKLQV
EEHHHHCCCHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEE
TNSTERSMEIRALVSAANASQLWDLRCLVREGLIAFLRNNYNDLLPHLNIEIERGRSPQN
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEECCCCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA