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The map label for this gene is csmC [H]

Identifier: 78188203

GI number: 78188203

Start: 249517

End: 249966

Strand: Reverse

Name: csmC [H]

Synonym: Cag_0220

Alternate gene names: 78188203

Gene position: 249966-249517 (Counterclockwise)

Preceding gene: 78188204

Following gene: 78188202

Centisome position: 9.72

GC content: 44.89

Gene sequence:

>450_bases
ATGAATGTCCCCATTTCAAGGGAGAACAATATGTCGGAATCGTACCAAAAACTGCGCAAAGATTTTAAAGAGCTTGAATT
TACCGATCGCCTCACCTTTCTTGCCGAAAGCGTACTCTTAACAGGTCAAGGCGCTGTTGTTGGAGGTCTTAATTTTGCCG
GTAGCCTTGTTGATACTGTTACTGGCACCGTTGGTTCAGTTATTGAAGCTACAGGCATTAGCAAATTGTTGGGTAACACC
AGCGGCGTGGTTGGCGAAACTATTGACCGTGTAGCAATAACGGTTAAAGATGCCTCACGTGCAGCAGGCGAATTGTATGT
GAATGCGGTTGAAACCGTTGAAAATGCAACCAGCAACGCGGCAACAGCCGTAGGCGATGCTGGAGTATCAGCATCTGAAG
TGGTAAAAAACTTTGCTGGCTCGTTTCAAAAAGTAACCATTAAGAAATAA

Upstream 100 bases:

>100_bases
AAGATAATGCTCGTTATGAGAGCGCTTGCTTAGATAAATATTTATGTTTAACTTTGTCGCAGTTAAATGAATCGTACCTC
TTCTCATAACAGGGGCAATA

Downstream 100 bases:

>100_bases
GCTTCCTTGAGCTATTGAGCCAGCATTTTTTGGCTCCTGCACAATTAAGTTCTTTTTCTTATTGACTCTTTTTTGTACTT
TAAGAAAGTCATGGACTCTT

Product: chlorosome envelope protein C

Products: NA

Alternate protein names: 14 kDa chlorosome protein [H]

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MNVPISRENNMSESYQKLRKDFKELEFTDRLTFLAESVLLTGQGAVVGGLNFAGSLVDTVTGTVGSVIEATGISKLLGNT
SGVVGETIDRVAITVKDASRAAGELYVNAVETVENATSNAATAVGDAGVSASEVVKNFAGSFQKVTIKK

Sequences:

>Translated_149_residues
MNVPISRENNMSESYQKLRKDFKELEFTDRLTFLAESVLLTGQGAVVGGLNFAGSLVDTVTGTVGSVIEATGISKLLGNT
SGVVGETIDRVAITVKDASRAAGELYVNAVETVENATSNAATAVGDAGVSASEVVKNFAGSFQKVTIKK
>Mature_149_residues
MNVPISRENNMSESYQKLRKDFKELEFTDRLTFLAESVLLTGQGAVVGGLNFAGSLVDTVTGTVGSVIEATGISKLLGNT
SGVVGETIDRVAITVKDASRAAGELYVNAVETVENATSNAATAVGDAGVSASEVVKNFAGSFQKVTIKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Chlorosome [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020995 [H]

Pfam domain/function: PF11098 Chlorosome_CsmC [H]

EC number: NA

Molecular weight: Translated: 15491; Mature: 15491

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVPISRENNMSESYQKLRKDFKELEFTDRLTFLAESVLLTGQGAVVGGLNFAGSLVDTV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHH
TGTVGSVIEATGISKLLGNTSGVVGETIDRVAITVKDASRAAGELYVNAVETVENATSNA
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHCCCCH
ATAVGDAGVSASEVVKNFAGSFQKVTIKK
HHHHCCCCCCHHHHHHHHHCCCCEEEECC
>Mature Secondary Structure
MNVPISRENNMSESYQKLRKDFKELEFTDRLTFLAESVLLTGQGAVVGGLNFAGSLVDTV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHH
TGTVGSVIEATGISKLLGNTSGVVGETIDRVAITVKDASRAAGELYVNAVETVENATSNA
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHCCCCH
ATAVGDAGVSASEVVKNFAGSFQKVTIKK
HHHHCCCCCCHHHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]