| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
Click here to switch to the map view.
The map label for this gene is 78188160
Identifier: 78188160
GI number: 78188160
Start: 198728
End: 198955
Strand: Reverse
Name: 78188160
Synonym: Cag_0177
Alternate gene names: NA
Gene position: 198955-198728 (Counterclockwise)
Preceding gene: 78188161
Following gene: 78188159
Centisome position: 7.74
GC content: 45.18
Gene sequence:
>228_bases ATGTATTGGAATCTTGAACTTGCTCGCTATATCGCTGATGCACCATGGCCTGTTACTAAGGATGAGCTTATTAGCTACGC AAACCGCACGGGCGCACCACAGCAGGTTATTGATAACCTTGAGGATTTACCCGATAGCGATGAAATGTATGAAAGCCTTG ATGAAGTGTGGCCCGACTATCCAACCGATGAGGATTTTGGATATGGCGATGAAGACCCATTGAATTAA
Upstream 100 bases:
>100_bases TACTTTGAAGAGCATGGCGCTCGAAAGTTTACCGCAATTCAATCAAAACAATCACCTAAGGATAACTCGTAACATAAAAA GACAAATAAAACCGCAACTT
Downstream 100 bases:
>100_bases GAAGTGCTGAGTGGCTGAGAGCGCTCCATTTGTCATGAGAGCGCTCTTACACTATTAACCCCTCACCGCAACCACCAACC AACAAGAGGAGCTTTGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 75; Mature: 75
Protein sequence:
>75_residues MYWNLELARYIADAPWPVTKDELISYANRTGAPQQVIDNLEDLPDSDEMYESLDEVWPDYPTDEDFGYGDEDPLN
Sequences:
>Translated_75_residues MYWNLELARYIADAPWPVTKDELISYANRTGAPQQVIDNLEDLPDSDEMYESLDEVWPDYPTDEDFGYGDEDPLN >Mature_75_residues MYWNLELARYIADAPWPVTKDELISYANRTGAPQQVIDNLEDLPDSDEMYESLDEVWPDYPTDEDFGYGDEDPLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8732; Mature: 8732
Theoretical pI: Translated: 3.32; Mature: 3.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYWNLELARYIADAPWPVTKDELISYANRTGAPQQVIDNLEDLPDSDEMYESLDEVWPDY CCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCC PTDEDFGYGDEDPLN CCCCCCCCCCCCCCC >Mature Secondary Structure MYWNLELARYIADAPWPVTKDELISYANRTGAPQQVIDNLEDLPDSDEMYESLDEVWPDY CCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCC PTDEDFGYGDEDPLN CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA