Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
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Accession | NC_007510 |
Length | 3,694,126 |
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The map label for this gene is 78067612
Identifier: 78067612
GI number: 78067612
Start: 3286996
End: 3287379
Strand: Reverse
Name: 78067612
Synonym: Bcep18194_A6143
Alternate gene names: NA
Gene position: 3287379-3286996 (Counterclockwise)
Preceding gene: 78067613
Following gene: 78067609
Centisome position: 88.99
GC content: 64.84
Gene sequence:
>384_bases ATGGCGAAGGTGGTCGATGCGATCCGCGCGCTCGAGCGCGATCGGTTCCGGGCGATGGTGGACGGGGACGGCGAGGCGCT CGACGCGCTTTTGTCGGACAAGGTGTTCTTCGTGCACACCAACGGCAAACGCGAAACCAAGCAGCAGTTCATCGACGCCA TCGTCGCCGGCCGCCGCCGCTATCGCCAGATCGAAATCCAGTCGCAGGACGTGCTGCCCGTCGGCGATGAAACCTGCATC GTCACCGGGCGCGCGTTGATCGAGATGGAAACGAACAACGGCGGCCTGGTCTTCCCGATTGCCTATACCTCCGTCCACAC CCACGAACAGGGCCGCTGGAGCCTGTTCGCGTGGCAGGCGACGCGGTGCGCGACCGAGACATGA
Upstream 100 bases:
>100_bases AGAGCCGAATCCTGGTATAAATTTCCACCAGTTCTACTTGCAGTACAACTTCTGATCCGCATGCCCGCGCACGGCGTGCG CGTTGCCGAGGAGTCAGGCG
Downstream 100 bases:
>100_bases GCGCGCGTGGCGCTCCTTTTCATGTCCCGACCGAAGCGGCCTTCTGGGCCGCTTTTTGCTGCCTCGTGCGGCGCGGATCG CGCGGCGCACGGGCGGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MAKVVDAIRALERDRFRAMVDGDGEALDALLSDKVFFVHTNGKRETKQQFIDAIVAGRRRYRQIEIQSQDVLPVGDETCI VTGRALIEMETNNGGLVFPIAYTSVHTHEQGRWSLFAWQATRCATET
Sequences:
>Translated_127_residues MAKVVDAIRALERDRFRAMVDGDGEALDALLSDKVFFVHTNGKRETKQQFIDAIVAGRRRYRQIEIQSQDVLPVGDETCI VTGRALIEMETNNGGLVFPIAYTSVHTHEQGRWSLFAWQATRCATET >Mature_126_residues AKVVDAIRALERDRFRAMVDGDGEALDALLSDKVFFVHTNGKRETKQQFIDAIVAGRRRYRQIEIQSQDVLPVGDETCIV TGRALIEMETNNGGLVFPIAYTSVHTHEQGRWSLFAWQATRCATET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14327; Mature: 14196
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVVDAIRALERDRFRAMVDGDGEALDALLSDKVFFVHTNGKRETKQQFIDAIVAGRRR CCHHHHHHHHHHHHHEEEEECCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCHHH YRQIEIQSQDVLPVGDETCIVTGRALIEMETNNGGLVFPIAYTSVHTHEQGRWSLFAWQA EEEEEECCCCCCCCCCCEEEEECEEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEE TRCATET CCCCCCC >Mature Secondary Structure AKVVDAIRALERDRFRAMVDGDGEALDALLSDKVFFVHTNGKRETKQQFIDAIVAGRRR CHHHHHHHHHHHHHEEEEECCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCHHH YRQIEIQSQDVLPVGDETCIVTGRALIEMETNNGGLVFPIAYTSVHTHEQGRWSLFAWQA EEEEEECCCCCCCCCCCEEEEECEEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEE TRCATET CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA