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The map label for this gene is yhbH [C]

Identifier: 78067591

GI number: 78067591

Start: 3266676

End: 3267035

Strand: Direct

Name: yhbH [C]

Synonym: Bcep18194_A6122

Alternate gene names: 78067591

Gene position: 3266676-3267035 (Clockwise)

Preceding gene: 78067590

Following gene: 78067592

Centisome position: 88.43

GC content: 56.11

Gene sequence:

>360_bases
ATGAACCTGAAGATCAGTGGACATCATCTCGAAGTCACGCCTGCAATTCGCGAATACGTGATCACCAAGCTGGACCGGGT
GCTACGGCATAGCGATCAGGTGATCGATGGCACTGTGATCCTCTCGGTCGACAACCACAAGGAAAAGGACAAGCAGCAGC
GCGCGGAAATCAATCTGCACCTGAAGGGCAAGGACATCTTCGTCGAAAGCGCGAACGGTAACCTGTATGCAGCGATCGAC
CTGCTGATCGACAAGCTGGACCGCCAGGTCGTCAAGCACATGGAGCGCCTGCAAACGCACGCGCACGACCCGATCAAGCT
TCAACCGTCGATCGACCAGATCGAACTGCCGCCGCAGTAA

Upstream 100 bases:

>100_bases
CGGGCGACCTGTCCGCGATACACCGCCTCGTGCGGGTCGGGCAAGTCGACCGGAGCGCCGCCTCGATGCGGCCGGGTGGT
CACTCGCTTGGAGAAGCACT

Downstream 100 bases:

>100_bases
CCTTCACCGCAACACATACGTCGCCCGGTTCGCCGGGCGTTTTTTTTGCGACTCCGCGCAGTGGTGCAACCGGTCCGTCC
GCGCTGCGCCACGCACGCGG

Product: sigma 54 modulation protein / SSU ribosomal protein S30P

Products: NA

Alternate protein names: ORF130 [H]

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MNLKISGHHLEVTPAIREYVITKLDRVLRHSDQVIDGTVILSVDNHKEKDKQQRAEINLHLKGKDIFVESANGNLYAAID
LLIDKLDRQVVKHMERLQTHAHDPIKLQPSIDQIELPPQ

Sequences:

>Translated_119_residues
MNLKISGHHLEVTPAIREYVITKLDRVLRHSDQVIDGTVILSVDNHKEKDKQQRAEINLHLKGKDIFVESANGNLYAAID
LLIDKLDRQVVKHMERLQTHAHDPIKLQPSIDQIELPPQ
>Mature_119_residues
MNLKISGHHLEVTPAIREYVITKLDRVLRHSDQVIDGTVILSVDNHKEKDKQQRAEINLHLKGKDIFVESANGNLYAAID
LLIDKLDRQVVKHMERLQTHAHDPIKLQPSIDQIELPPQ

Specific function: Probably modulates the activity of sigma(54) (rpoN) [H]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma(54) modulation protein family [H]

Homologues:

Organism=Escherichia coli, GI1789595, Length=100, Percent_Identity=35, Blast_Score=66, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 13650; Mature: 13650

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKISGHHLEVTPAIREYVITKLDRVLRHSDQVIDGTVILSVDNHKEKDKQQRAEINLH
CCEEECCCEEEECHHHHHHHHHHHHHHHHCCCCEECCEEEEEECCCCCHHHHHHHEEEEE
LKGKDIFVESANGNLYAAIDLLIDKLDRQVVKHMERLQTHAHDPIKLQPSIDQIELPPQ
ECCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEECCCC
>Mature Secondary Structure
MNLKISGHHLEVTPAIREYVITKLDRVLRHSDQVIDGTVILSVDNHKEKDKQQRAEINLH
CCEEECCCEEEECHHHHHHHHHHHHHHHHCCCCEECCEEEEEECCCCCHHHHHHHEEEEE
LKGKDIFVESANGNLYAAIDLLIDKLDRQVVKHMERLQTHAHDPIKLQPSIDQIELPPQ
ECCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1417413 [H]