Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
---|---|
Accession | NC_007510 |
Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is phbA [H]
Identifier: 78067571
GI number: 78067571
Start: 3244838
End: 3246019
Strand: Reverse
Name: phbA [H]
Synonym: Bcep18194_A6102
Alternate gene names: 78067571
Gene position: 3246019-3244838 (Counterclockwise)
Preceding gene: 78067572
Following gene: 78067570
Centisome position: 87.87
GC content: 69.37
Gene sequence:
>1182_bases ATGACGGATGTAGTGATCGTATCGGCCGCGCGGACCGCGGTCGGCAAATTCGGCGGTTCGCTTGCGAAGATTGCGGCGCC CGAACTGGGCGCGACGGTGATCCGCGCGGTGCTGGAGCGTGCGGGCGTGAAGCCCGAGCAGGTGAGCGAAGTGATCATGG GCCAGGTGCTGACGGCCGGTTCCGGGCAGAACCCGGCACGGCAGTCGCTGATCAAGGCCGGGCTGCCGACGGCAGTGCCG GGGATGACGATCAACAAGGTGTGCGGCTCGGGCCTGAAGGCCGTGATGCTGGCGGCGAACGCGATTGTCGCGGGGGATGC CGAGATCGTGATCGCGGGCGGCCAGGAGAACATGAGCGCGTCGCCGCACGTGCTGCCGGGCTCGCGCGACGGGTTCCGCA TGGGCGACGCGAAGCTGGTCGACACGATGATCGTCGACGGCCTGTGGGACGTGTACAACCAGTACCACATGGGCATCACG GCGGAGAACGTCGCGAAGGAGTACGGGATCACGCGCGAAGAGCAGGACGCCTTCGCGGCGCTGTCGCAGAACAAGGCGGA AGCCGCGCAGAAGGCCGGCCGCTTCAACGACGAGATCGTGCCGGTGGCGATTCCGCAACGCAAGGGCGAGCCGCTGCAGT TCGCCACCGATGAATTCGTGCGTCACGGCGTGACGGCGGAATCGCTGTCCGGGCTGAAGCCGGCATTCTCGAAGGACGGC TCGGTGACGGCGGCGAACGCGTCGGGGCTGAACGACGGTGCGGCGGCGGTGCTGGTGATGTCGGCGCAGAAGGCGGCGGC ACTCGGCCTGACGCCGCTGGCGCGGATCAAGGCGTATGCGAACGCGGGCGTGGATCCGAGCGTGATGGGCATGGGCCCGG TGCCGGCCTCGCGCCGGTGCCTGGAGCGCGCGGGCTGGACGCCGGGCGACCTGGACCTGATGGAGATCAACGAGGCGTTC GCGGCGCAGGCGCTGGCGGTGCACAAGCAGATGGGCTGGGACACGTCGAAGGTGAACGTGAACGGCGGGGCGATCGCGAT CGGCCACCCGATCGGCGCGTCGGGCTGCCGGATCCTGGTGACGCTGCTGCACGAGATGGCCAAGCGCGATGCGAAGCGCG GGCTGGCGTCGCTGTGTATCGGCGGCGGGATGGGCGTCGCACTCGCGGTCGAGCGCGCCTGA
Upstream 100 bases:
>100_bases ACCGCCATCGCGCCCGACGGCCCGAGATGCGCGATCGCCAGCCGAGGCCGGCTCGCGCCGGCGTCAGAACGACGAACTGA TTTCGATGCAGGAACTGGAC
Downstream 100 bases:
>100_bases GCAGGGTCTGACGTACATTCCGCGTACGGCGCCGGCCAGCGCCGCACGCGGGCGAAGCGGATTTCGCGCACGACAAGCAG TCAATAACAAGCGCGAGGTG
Product: acetyl-CoA acetyltransferase
Products: NA
Alternate protein names: Acetoacetyl-CoA thiolase [H]
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MTDVVIVSAARTAVGKFGGSLAKIAAPELGATVIRAVLERAGVKPEQVSEVIMGQVLTAGSGQNPARQSLIKAGLPTAVP GMTINKVCGSGLKAVMLAANAIVAGDAEIVIAGGQENMSASPHVLPGSRDGFRMGDAKLVDTMIVDGLWDVYNQYHMGIT AENVAKEYGITREEQDAFAALSQNKAEAAQKAGRFNDEIVPVAIPQRKGEPLQFATDEFVRHGVTAESLSGLKPAFSKDG SVTAANASGLNDGAAAVLVMSAQKAAALGLTPLARIKAYANAGVDPSVMGMGPVPASRRCLERAGWTPGDLDLMEINEAF AAQALAVHKQMGWDTSKVNVNGGAIAIGHPIGASGCRILVTLLHEMAKRDAKRGLASLCIGGGMGVALAVERA
Sequences:
>Translated_393_residues MTDVVIVSAARTAVGKFGGSLAKIAAPELGATVIRAVLERAGVKPEQVSEVIMGQVLTAGSGQNPARQSLIKAGLPTAVP GMTINKVCGSGLKAVMLAANAIVAGDAEIVIAGGQENMSASPHVLPGSRDGFRMGDAKLVDTMIVDGLWDVYNQYHMGIT AENVAKEYGITREEQDAFAALSQNKAEAAQKAGRFNDEIVPVAIPQRKGEPLQFATDEFVRHGVTAESLSGLKPAFSKDG SVTAANASGLNDGAAAVLVMSAQKAAALGLTPLARIKAYANAGVDPSVMGMGPVPASRRCLERAGWTPGDLDLMEINEAF AAQALAVHKQMGWDTSKVNVNGGAIAIGHPIGASGCRILVTLLHEMAKRDAKRGLASLCIGGGMGVALAVERA >Mature_392_residues TDVVIVSAARTAVGKFGGSLAKIAAPELGATVIRAVLERAGVKPEQVSEVIMGQVLTAGSGQNPARQSLIKAGLPTAVPG MTINKVCGSGLKAVMLAANAIVAGDAEIVIAGGQENMSASPHVLPGSRDGFRMGDAKLVDTMIVDGLWDVYNQYHMGITA ENVAKEYGITREEQDAFAALSQNKAEAAQKAGRFNDEIVPVAIPQRKGEPLQFATDEFVRHGVTAESLSGLKPAFSKDGS VTAANASGLNDGAAAVLVMSAQKAAALGLTPLARIKAYANAGVDPSVMGMGPVPASRRCLERAGWTPGDLDLMEINEAFA AQALAVHKQMGWDTSKVNVNGGAIAIGHPIGASGCRILVTLLHEMAKRDAKRGLASLCIGGGMGVALAVERA
Specific function: Unknown
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiolase family [H]
Homologues:
Organism=Homo sapiens, GI148539872, Length=391, Percent_Identity=56.0102301790281, Blast_Score=440, Evalue=1e-124, Organism=Homo sapiens, GI4557237, Length=393, Percent_Identity=44.7837150127226, Blast_Score=323, Evalue=2e-88, Organism=Homo sapiens, GI167614485, Length=390, Percent_Identity=44.3589743589744, Blast_Score=322, Evalue=4e-88, Organism=Homo sapiens, GI4501853, Length=396, Percent_Identity=42.6767676767677, Blast_Score=268, Evalue=5e-72, Organism=Homo sapiens, GI4504327, Length=424, Percent_Identity=30.8962264150943, Blast_Score=182, Evalue=5e-46, Organism=Homo sapiens, GI194353979, Length=393, Percent_Identity=32.0610687022901, Blast_Score=159, Evalue=6e-39, Organism=Homo sapiens, GI19923233, Length=385, Percent_Identity=23.8961038961039, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI302344760, Length=334, Percent_Identity=24.251497005988, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI302344767, Length=334, Percent_Identity=24.251497005988, Blast_Score=66, Evalue=5e-11, Organism=Escherichia coli, GI87082165, Length=392, Percent_Identity=62.5, Blast_Score=491, Evalue=1e-140, Organism=Escherichia coli, GI1788554, Length=393, Percent_Identity=60.3053435114504, Blast_Score=448, Evalue=1e-127, Organism=Escherichia coli, GI1787663, Length=404, Percent_Identity=45.7920792079208, Blast_Score=322, Evalue=2e-89, Organism=Escherichia coli, GI48994986, Length=399, Percent_Identity=42.3558897243108, Blast_Score=273, Evalue=2e-74, Organism=Escherichia coli, GI1788683, Length=409, Percent_Identity=33.9853300733496, Blast_Score=196, Evalue=2e-51, Organism=Caenorhabditis elegans, GI133906874, Length=390, Percent_Identity=46.1538461538462, Blast_Score=332, Evalue=3e-91, Organism=Caenorhabditis elegans, GI25147385, Length=387, Percent_Identity=42.6356589147287, Blast_Score=302, Evalue=2e-82, Organism=Caenorhabditis elegans, GI17535921, Length=396, Percent_Identity=41.9191919191919, Blast_Score=283, Evalue=2e-76, Organism=Caenorhabditis elegans, GI17535917, Length=392, Percent_Identity=32.6530612244898, Blast_Score=186, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17551802, Length=428, Percent_Identity=32.2429906542056, Blast_Score=186, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6325229, Length=397, Percent_Identity=41.5617128463476, Blast_Score=286, Evalue=4e-78, Organism=Saccharomyces cerevisiae, GI6322031, Length=399, Percent_Identity=40.3508771929825, Blast_Score=237, Evalue=3e-63, Organism=Drosophila melanogaster, GI24655093, Length=392, Percent_Identity=57.1428571428571, Blast_Score=449, Evalue=1e-126, Organism=Drosophila melanogaster, GI24640423, Length=393, Percent_Identity=46.0559796437659, Blast_Score=323, Evalue=9e-89, Organism=Drosophila melanogaster, GI17648125, Length=390, Percent_Identity=45.3846153846154, Blast_Score=315, Evalue=5e-86, Organism=Drosophila melanogaster, GI17137578, Length=425, Percent_Identity=30.8235294117647, Blast_Score=176, Evalue=2e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020615 - InterPro: IPR020610 - InterPro: IPR020617 - InterPro: IPR020613 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: =2.3.1.9 [H]
Molecular weight: Translated: 40412; Mature: 40281
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: PS00098 THIOLASE_1 ; PS00737 THIOLASE_2 ; PS00099 THIOLASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDVVIVSAARTAVGKFGGSLAKIAAPELGATVIRAVLERAGVKPEQVSEVIMGQVLTAG CCCEEEEEHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC SGQNPARQSLIKAGLPTAVPGMTINKVCGSGLKAVMLAANAIVAGDAEIVIAGGQENMSA CCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHEEECCCEEEEECCCCCCCC SPHVLPGSRDGFRMGDAKLVDTMIVDGLWDVYNQYHMGITAENVAKEYGITREEQDAFAA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHH LSQNKAEAAQKAGRFNDEIVPVAIPQRKGEPLQFATDEFVRHGVTAESLSGLKPAFSKDG HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCCC SVTAANASGLNDGAAAVLVMSAQKAAALGLTPLARIKAYANAGVDPSVMGMGPVPASRRC CEEECCCCCCCCCCEEEEEEECHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHH LERAGWTPGDLDLMEINEAFAAQALAVHKQMGWDTSKVNVNGGAIAIGHPIGASGCRILV HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCCHHHHHHH TLLHEMAKRDAKRGLASLCIGGGMGVALAVERA HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC >Mature Secondary Structure TDVVIVSAARTAVGKFGGSLAKIAAPELGATVIRAVLERAGVKPEQVSEVIMGQVLTAG CCEEEEEHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC SGQNPARQSLIKAGLPTAVPGMTINKVCGSGLKAVMLAANAIVAGDAEIVIAGGQENMSA CCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHEEECCCEEEEECCCCCCCC SPHVLPGSRDGFRMGDAKLVDTMIVDGLWDVYNQYHMGITAENVAKEYGITREEQDAFAA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHH LSQNKAEAAQKAGRFNDEIVPVAIPQRKGEPLQFATDEFVRHGVTAESLSGLKPAFSKDG HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCCC SVTAANASGLNDGAAAVLVMSAQKAAALGLTPLARIKAYANAGVDPSVMGMGPVPASRRC CEEECCCCCCCCCCEEEEEEECHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHH LERAGWTPGDLDLMEINEAFAAQALAVHKQMGWDTSKVNVNGGAIAIGHPIGASGCRILV HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCCHHHHHHH TLLHEMAKRDAKRGLASLCIGGGMGVALAVERA HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2670935; 2670936 [H]