| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is phbB [H]
Identifier: 78067570
GI number: 78067570
Start: 3243878
End: 3244588
Strand: Reverse
Name: phbB [H]
Synonym: Bcep18194_A6101
Alternate gene names: 78067570
Gene position: 3244588-3243878 (Counterclockwise)
Preceding gene: 78067571
Following gene: 78067569
Centisome position: 87.83
GC content: 65.68
Gene sequence:
>711_bases ATGGGCGGCCTCGGCGAAGCGGTCAGCATCAGGTTGAACGACGCGGGCCACCGGGTAGTCGTCACGTATTCGCCGAACAA CACCGGCGCGGACCGCTGGCTGACCGAGATGCACGCGGCCGGTCGCGAGTTCCACGCGTACCCGGTGGACGTGGCCGATC ACGATTCGTGCCAGCAATGCATCGAGAAGATCGCGCGGGACGTCGGCCCGGTCGACATTCTCGTGAACAACGCGGGCATC ACGCGCGACATGACGCTGCGCAAGCTCGACAAGGTCAACTGGGACGCGGTGATCCGCACCAACCTCGATTCCGTGTTCAA CATGACGAAGCCGGTCTGCGAAAGCATGGTCGAGCGCGGCTGGGGCCGCATCGTCAACATCTCGTCGGTGAACGGCTCGA AGGGTTCGGTCGGCCAGACCAACTACGCGGCCGCGAAGGCCGGCATGCACGGTTTCACGAAATCGCTCGCGCTCGAGATC GCGCGCAAGGGCGTGACGGTGAACACGGTGTCGCCGGGCTACCTCGCGACGAAGATGGTCACGGCGATCCCGCAGGACAT CCTCGACTCGAAGATCCTCCCGCAGATTCCGGCGGGCCGGCTCGGCAAGCCCGAGGAAGTCGCGGCGCTGGTGGCCTACC TGTGCTCGGAGGAGGCCGGCTTCGTCACGGGCTCCAACATCGCGATCAACGGCGGGCAGCACATGCACTGA
Upstream 100 bases:
>100_bases GGGCGGCAGCCTGAGCGATGCCGTCGCCCCGCCTTCATCGATTACTTTCTTGTCGGTAATTTATAGGATGACTAAGCGAA TTGCAGTTGTGACTGGTGGA
Downstream 100 bases:
>100_bases CCCGCAGCGGCCCGGCGGCGTGCGCGCACGTGGCGGGCCGCGTTCCGCAATATCCAGTGCCAGGGCGGCGGCAGACGCGC CGCTTCGGCTTCGCATTCCG
Product: 3-oxoacyl-[acyl-carrier-protein] reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MGGLGEAVSIRLNDAGHRVVVTYSPNNTGADRWLTEMHAAGREFHAYPVDVADHDSCQQCIEKIARDVGPVDILVNNAGI TRDMTLRKLDKVNWDAVIRTNLDSVFNMTKPVCESMVERGWGRIVNISSVNGSKGSVGQTNYAAAKAGMHGFTKSLALEI ARKGVTVNTVSPGYLATKMVTAIPQDILDSKILPQIPAGRLGKPEEVAALVAYLCSEEAGFVTGSNIAINGGQHMH
Sequences:
>Translated_236_residues MGGLGEAVSIRLNDAGHRVVVTYSPNNTGADRWLTEMHAAGREFHAYPVDVADHDSCQQCIEKIARDVGPVDILVNNAGI TRDMTLRKLDKVNWDAVIRTNLDSVFNMTKPVCESMVERGWGRIVNISSVNGSKGSVGQTNYAAAKAGMHGFTKSLALEI ARKGVTVNTVSPGYLATKMVTAIPQDILDSKILPQIPAGRLGKPEEVAALVAYLCSEEAGFVTGSNIAINGGQHMH >Mature_235_residues GGLGEAVSIRLNDAGHRVVVTYSPNNTGADRWLTEMHAAGREFHAYPVDVADHDSCQQCIEKIARDVGPVDILVNNAGIT RDMTLRKLDKVNWDAVIRTNLDSVFNMTKPVCESMVERGWGRIVNISSVNGSKGSVGQTNYAAAKAGMHGFTKSLALEIA RKGVTVNTVSPGYLATKMVTAIPQDILDSKILPQIPAGRLGKPEEVAALVAYLCSEEAGFVTGSNIAINGGQHMH
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=242, Percent_Identity=38.0165289256198, Blast_Score=155, Evalue=2e-38, Organism=Homo sapiens, GI40254992, Length=233, Percent_Identity=33.4763948497854, Blast_Score=127, Evalue=1e-29, Organism=Homo sapiens, GI4504505, Length=226, Percent_Identity=32.3008849557522, Blast_Score=111, Evalue=6e-25, Organism=Homo sapiens, GI32483357, Length=232, Percent_Identity=28.8793103448276, Blast_Score=105, Evalue=3e-23, Organism=Homo sapiens, GI19923817, Length=252, Percent_Identity=30.1587301587302, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI66933014, Length=200, Percent_Identity=32, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI7705925, Length=241, Percent_Identity=30.7053941908714, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI4503301, Length=198, Percent_Identity=28.7878787878788, Blast_Score=91, Evalue=8e-19, Organism=Homo sapiens, GI4758504, Length=247, Percent_Identity=30.3643724696356, Blast_Score=88, Evalue=5e-18, Organism=Homo sapiens, GI5031737, Length=232, Percent_Identity=28.448275862069, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI59889578, Length=193, Percent_Identity=30.0518134715026, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI126723750, Length=234, Percent_Identity=26.0683760683761, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI7657478, Length=180, Percent_Identity=31.1111111111111, Blast_Score=77, Evalue=9e-15, Organism=Homo sapiens, GI10190704, Length=235, Percent_Identity=28.0851063829787, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI20149619, Length=193, Percent_Identity=34.1968911917098, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI31542939, Length=142, Percent_Identity=32.3943661971831, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI83715985, Length=247, Percent_Identity=28.7449392712551, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI210032110, Length=162, Percent_Identity=27.1604938271605, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI40807363, Length=190, Percent_Identity=27.8947368421053, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1787335, Length=233, Percent_Identity=44.6351931330472, Blast_Score=194, Evalue=5e-51, Organism=Escherichia coli, GI1790717, Length=234, Percent_Identity=31.1965811965812, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI1789208, Length=234, Percent_Identity=32.0512820512821, Blast_Score=127, Evalue=8e-31, Organism=Escherichia coli, GI87082100, Length=245, Percent_Identity=34.2857142857143, Blast_Score=126, Evalue=1e-30, Organism=Escherichia coli, GI1788459, Length=231, Percent_Identity=30.7359307359307, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI87082160, Length=231, Percent_Identity=28.5714285714286, Blast_Score=111, Evalue=4e-26, Organism=Escherichia coli, GI2367175, Length=236, Percent_Identity=31.7796610169492, Blast_Score=107, Evalue=7e-25, Organism=Escherichia coli, GI2367365, Length=232, Percent_Identity=33.6206896551724, Blast_Score=97, Evalue=7e-22, Organism=Escherichia coli, GI1786812, Length=242, Percent_Identity=27.6859504132231, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1787905, Length=234, Percent_Identity=27.3504273504274, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1789057, Length=251, Percent_Identity=29.8804780876494, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1789378, Length=237, Percent_Identity=26.1603375527426, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1787820, Length=174, Percent_Identity=29.3103448275862, Blast_Score=74, Evalue=8e-15, Organism=Caenorhabditis elegans, GI25147288, Length=235, Percent_Identity=40, Blast_Score=159, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17555706, Length=234, Percent_Identity=37.6068376068376, Blast_Score=148, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17560676, Length=234, Percent_Identity=31.6239316239316, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17568967, Length=235, Percent_Identity=31.4893617021277, Blast_Score=111, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17561402, Length=240, Percent_Identity=30.4166666666667, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17562910, Length=250, Percent_Identity=31.2, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI193203117, Length=186, Percent_Identity=34.9462365591398, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI193203115, Length=186, Percent_Identity=34.9462365591398, Blast_Score=94, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17563726, Length=199, Percent_Identity=32.1608040201005, Blast_Score=94, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17538480, Length=251, Percent_Identity=29.4820717131474, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17560150, Length=248, Percent_Identity=30.241935483871, Blast_Score=89, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17562990, Length=247, Percent_Identity=28.3400809716599, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI71994600, Length=196, Percent_Identity=31.1224489795918, Blast_Score=88, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17538182, Length=248, Percent_Identity=27.8225806451613, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17562906, Length=248, Percent_Identity=27.8225806451613, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17562904, Length=251, Percent_Identity=28.2868525896414, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71994604, Length=194, Percent_Identity=30.9278350515464, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17544670, Length=253, Percent_Identity=26.4822134387352, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17562908, Length=250, Percent_Identity=28, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17536651, Length=195, Percent_Identity=32.3076923076923, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI72000259, Length=198, Percent_Identity=29.2929292929293, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17561272, Length=198, Percent_Identity=27.7777777777778, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17564282, Length=180, Percent_Identity=30.5555555555556, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17559104, Length=252, Percent_Identity=25.7936507936508, Blast_Score=80, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17551412, Length=250, Percent_Identity=28, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17508651, Length=241, Percent_Identity=26.9709543568465, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17536025, Length=239, Percent_Identity=28.0334728033473, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17538486, Length=250, Percent_Identity=25.2, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI115534694, Length=234, Percent_Identity=26.9230769230769, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17565030, Length=254, Percent_Identity=26.3779527559055, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17508895, Length=183, Percent_Identity=28.9617486338798, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193204405, Length=257, Percent_Identity=27.2373540856031, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17560220, Length=253, Percent_Identity=26.0869565217391, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17560332, Length=254, Percent_Identity=28.3464566929134, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17531453, Length=251, Percent_Identity=26.6932270916335, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI193207185, Length=146, Percent_Identity=28.7671232876712, Blast_Score=64, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=228, Percent_Identity=31.5789473684211, Blast_Score=103, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6324126, Length=185, Percent_Identity=26.4864864864865, Blast_Score=73, Evalue=4e-14, Organism=Drosophila melanogaster, GI24639444, Length=233, Percent_Identity=35.1931330472103, Blast_Score=132, Evalue=2e-31, Organism=Drosophila melanogaster, GI23397609, Length=190, Percent_Identity=38.9473684210526, Blast_Score=110, Evalue=5e-25, Organism=Drosophila melanogaster, GI18859837, Length=226, Percent_Identity=35.3982300884956, Blast_Score=108, Evalue=3e-24, Organism=Drosophila melanogaster, GI24644339, Length=190, Percent_Identity=35.7894736842105, Blast_Score=108, Evalue=3e-24, Organism=Drosophila melanogaster, GI21355319, Length=232, Percent_Identity=29.7413793103448, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI21357041, Length=192, Percent_Identity=34.375, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI28571526, Length=192, Percent_Identity=33.8541666666667, Blast_Score=98, Evalue=5e-21, Organism=Drosophila melanogaster, GI24643142, Length=232, Percent_Identity=31.8965517241379, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24644337, Length=187, Percent_Identity=36.3636363636364, Blast_Score=91, Evalue=9e-19, Organism=Drosophila melanogaster, GI21358495, Length=191, Percent_Identity=31.413612565445, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI17737361, Length=249, Percent_Identity=28.1124497991968, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24581726, Length=158, Percent_Identity=29.746835443038, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI24649181, Length=179, Percent_Identity=29.0502793296089, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI24665243, Length=191, Percent_Identity=31.9371727748691, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI221331218, Length=191, Percent_Identity=31.9371727748691, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI21355631, Length=159, Percent_Identity=29.559748427673, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24584748, Length=152, Percent_Identity=33.5526315789474, Blast_Score=64, Evalue=6e-11, Organism=Drosophila melanogaster, GI161076933, Length=152, Percent_Identity=33.5526315789474, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011283 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.36 [H]
Molecular weight: Translated: 25271; Mature: 25140
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGLGEAVSIRLNDAGHRVVVTYSPNNTGADRWLTEMHAAGREFHAYPVDVADHDSCQQC CCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH IEKIARDVGPVDILVNNAGITRDMTLRKLDKVNWDAVIRTNLDSVFNMTKPVCESMVERG HHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCC WGRIVNISSVNGSKGSVGQTNYAAAKAGMHGFTKSLALEIARKGVTVNTVSPGYLATKMV CCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHH TAIPQDILDSKILPQIPAGRLGKPEEVAALVAYLCSEEAGFVTGSNIAINGGQHMH HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCEEECCCCCCC >Mature Secondary Structure GGLGEAVSIRLNDAGHRVVVTYSPNNTGADRWLTEMHAAGREFHAYPVDVADHDSCQQC CCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH IEKIARDVGPVDILVNNAGITRDMTLRKLDKVNWDAVIRTNLDSVFNMTKPVCESMVERG HHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCC WGRIVNISSVNGSKGSVGQTNYAAAKAGMHGFTKSLALEIARKGVTVNTVSPGYLATKMV CCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHH TAIPQDILDSKILPQIPAGRLGKPEEVAALVAYLCSEEAGFVTGSNIAINGGQHMH HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2670935 [H]