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The map label for this gene is yggG [H]

Identifier: 78067554

GI number: 78067554

Start: 3228162

End: 3228923

Strand: Reverse

Name: yggG [H]

Synonym: Bcep18194_A6085

Alternate gene names: 78067554

Gene position: 3228923-3228162 (Counterclockwise)

Preceding gene: 78067555

Following gene: 78067549

Centisome position: 87.41

GC content: 64.04

Gene sequence:

>762_bases
ATGCAACTCAAGAAAGCGGTGGCAGCGTGTGGCGTGGCGTTTCTGTTGAGCGCGTGCGGCGGGGTACAGAGCCTTGACGC
GAACAGCCTGACGTCGGCGGGGACCAGCCTGTACAAGGCAGCGACGCTGTCGGATGCCGACATCGCCGCACTGTCGAATG
ACTCGTGCAAGTCGAGCGACGCCGAATCGAAGATCGCGCCGGCGAACAGCGCGTACGCGAAGCGCCTGACGAAGGTGATG
AAGGGCTTCGGCGACATGACGCTGAACGGCCAGAAGATCAACTACAAGGTCTACATGACCAAGGACGTCAACGCGTGGGC
GATGGGCAATGGCTGCGTGCGCGTGTACAGCGGCCTGATGGACCAGATGAACGACGACGAGCTGCGCGGCGTGATCGGCC
ATGAAATGGGCCACGTTGCACTGGGTCACTCGAAGAAGGCGATGCAGACGGCCTACGCGGTCAGCGCGGCGCGCACCGCG
GCCGGCGCGGCATCGCCGGGCGTGGCGGCACTGTCGAGCTCGCAGCTCGGCGACATCACCGAGAAGTTCATCAACGCGCA
GTTCTCGCAGACGCAGGAAAGCGCGGCCGACGACTACTCGTTCGACCTGATGAAGCAGAAGGGCATGAACCAGAAGGGCC
TCGTCACCGCGTTCCAGAAGCTCGCGAAGCTCGACGGCGGCCAGAGCTCGATGATGAGCTCGCACCCGTCGTCGGCGAGC
CGTGCGCAGCACATCGAAGATCGCATCGCGAAGGGCAGCTGA

Upstream 100 bases:

>100_bases
GACCGGTAATGAACGTGTCATCGGATGTAAACATCTGGTAATTTTCTGCCGGATTATGCAAAATCGCCGCTCCCAAATAC
AACTATCGAGGGATTCCGGG

Downstream 100 bases:

>100_bases
TCGCGCAACCGAGCGCCTGCCGCGGCGGGCGATCGACCGGCGAAATGAAAAACCCCACGCTCTTCCGGGCGTGGGGTTTT
GTTTTTGGGGCGTACGCTGC

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MQLKKAVAACGVAFLLSACGGVQSLDANSLTSAGTSLYKAATLSDADIAALSNDSCKSSDAESKIAPANSAYAKRLTKVM
KGFGDMTLNGQKINYKVYMTKDVNAWAMGNGCVRVYSGLMDQMNDDELRGVIGHEMGHVALGHSKKAMQTAYAVSAARTA
AGAASPGVAALSSSQLGDITEKFINAQFSQTQESAADDYSFDLMKQKGMNQKGLVTAFQKLAKLDGGQSSMMSSHPSSAS
RAQHIEDRIAKGS

Sequences:

>Translated_253_residues
MQLKKAVAACGVAFLLSACGGVQSLDANSLTSAGTSLYKAATLSDADIAALSNDSCKSSDAESKIAPANSAYAKRLTKVM
KGFGDMTLNGQKINYKVYMTKDVNAWAMGNGCVRVYSGLMDQMNDDELRGVIGHEMGHVALGHSKKAMQTAYAVSAARTA
AGAASPGVAALSSSQLGDITEKFINAQFSQTQESAADDYSFDLMKQKGMNQKGLVTAFQKLAKLDGGQSSMMSSHPSSAS
RAQHIEDRIAKGS
>Mature_253_residues
MQLKKAVAACGVAFLLSACGGVQSLDANSLTSAGTSLYKAATLSDADIAALSNDSCKSSDAESKIAPANSAYAKRLTKVM
KGFGDMTLNGQKINYKVYMTKDVNAWAMGNGCVRVYSGLMDQMNDDELRGVIGHEMGHVALGHSKKAMQTAYAVSAARTA
AGAASPGVAALSSSQLGDITEKFINAQFSQTQESAADDYSFDLMKQKGMNQKGLVTAFQKLAKLDGGQSSMMSSHPSSAS
RAQHIEDRIAKGS

Specific function: Seems to regulate the expression of speB [H]

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M48B family [H]

Homologues:

Organism=Escherichia coli, GI87082185, Length=251, Percent_Identity=54.5816733067729, Blast_Score=286, Evalue=8e-79,
Organism=Escherichia coli, GI87081800, Length=241, Percent_Identity=56.0165975103734, Blast_Score=276, Evalue=9e-76,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 26472; Mature: 26472

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLKKAVAACGVAFLLSACGGVQSLDANSLTSAGTSLYKAATLSDADIAALSNDSCKSSD
CCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCC
AESKIAPANSAYAKRLTKVMKGFGDMTLNGQKINYKVYMTKDVNAWAMGNGCVRVYSGLM
CCCCCCCCCHHHHHHHHHHHHCCCCCEECCCEEEEEEEEECCCCEEECCCCHHHHHHHHH
DQMNDDELRGVIGHEMGHVALGHSKKAMQTAYAVSAARTAAGAASPGVAALSSSQLGDIT
HCCCHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHH
EKFINAQFSQTQESAADDYSFDLMKQKGMNQKGLVTAFQKLAKLDGGQSSMMSSHPSSAS
HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCHHH
RAQHIEDRIAKGS
HHHHHHHHHCCCC
>Mature Secondary Structure
MQLKKAVAACGVAFLLSACGGVQSLDANSLTSAGTSLYKAATLSDADIAALSNDSCKSSD
CCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCC
AESKIAPANSAYAKRLTKVMKGFGDMTLNGQKINYKVYMTKDVNAWAMGNGCVRVYSGLM
CCCCCCCCCHHHHHHHHHHHHCCCCCEECCCEEEEEEEEECCCCEEECCCCHHHHHHHHH
DQMNDDELRGVIGHEMGHVALGHSKKAMQTAYAVSAARTAAGAASPGVAALSSSQLGDIT
HCCCHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHH
EKFINAQFSQTQESAADDYSFDLMKQKGMNQKGLVTAFQKLAKLDGGQSSMMSSHPSSAS
HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCHHH
RAQHIEDRIAKGS
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2153656; 9278503; 1310091 [H]