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The map label for this gene is ygbL [C]

Identifier: 78067547

GI number: 78067547

Start: 3219700

End: 3220473

Strand: Reverse

Name: ygbL [C]

Synonym: Bcep18194_A6078

Alternate gene names: 78067547

Gene position: 3220473-3219700 (Counterclockwise)

Preceding gene: 78067548

Following gene: 78067546

Centisome position: 87.18

GC content: 63.7

Gene sequence:

>774_bases
ATGCAACGTGTCCCGAACCAGCCGTTCACGCGTCCCGCCCGTTTCTCCGAAGCCGAATGGCAGGCGCGCGTGCAGCTCGC
GGCGGCTTACCGCATCTTCGATCATCTCGGCTGGACCGAGCTGATCTACAACCATATCTCGCTGCGCGTGCCGGGCGAGG
ACGGGCATTTCCTGATCAATCCGTTCGGGCTCCATTACCGCGAGGTGTGCGCGTCGAACCTTGTGAAGATCGACATCGAC
GGCAACGTGATCGGTCATTCCGACTGGCCGATCAATCCGGCCGGCTTCACGTTCCACAGCGCGATCCATGCGGCGCTGCC
CGATGCGCACTGCGTGATGCACGTGCACACGACACCGACGATGGCCGTGTGCTGTTCGCGCGACGGGCTGTCGTTCTCGA
ACTTCTATTCGGCGCAGCTGTACGGGAAGATCGCGTATCACGACTTCGAGGGCATCACCGTGCATCTCGAAGAGGGGCGG
CGCATCGTCGAGAGCGCCGGCGGGCGGCCCGTGCTGCTGTTGCGAAACCATGGGCCCGTGACGATCGGCGCAACACTTGC
GCAGACGTTCTCGCTGATGTGGCTGCTCAATCGCGCGTGTGAGGTGCAGATCGCCACGCATGCGATCGGCGATGCGTTGC
CGATTGCGCCGCCCGTGCTCGAAGGGTGCGTGCGCGATTCGCTGAATTTCGATCCGAAGCATGGCGCGGGGCAGGATGCG
TTCGACGCGCTGCAGCGTATCGTCGACTGCATCGATCCCGGCTATCGCGCGTGA

Upstream 100 bases:

>100_bases
GGTGATATGGTTGTGCGCGCAACTAATGTGGCGCGCAAGTCGGTGCCGCCAGGCGGCCCGTACCACGCGGGCCGCGCACA
CCCGTAACCGGAGTTCCCCC

Downstream 100 bases:

>100_bases
TGTGACGCGGCGCGATCGCTTCGTCATGCTTGATACGGTGTGAACCGGACCCGACTGGGGCGTGCGCAAAAAAAACGCGG
CCGGGCGGCCGCGTGAATAC

Product: aldolase II superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MQRVPNQPFTRPARFSEAEWQARVQLAAAYRIFDHLGWTELIYNHISLRVPGEDGHFLINPFGLHYREVCASNLVKIDID
GNVIGHSDWPINPAGFTFHSAIHAALPDAHCVMHVHTTPTMAVCCSRDGLSFSNFYSAQLYGKIAYHDFEGITVHLEEGR
RIVESAGGRPVLLLRNHGPVTIGATLAQTFSLMWLLNRACEVQIATHAIGDALPIAPPVLEGCVRDSLNFDPKHGAGQDA
FDALQRIVDCIDPGYRA

Sequences:

>Translated_257_residues
MQRVPNQPFTRPARFSEAEWQARVQLAAAYRIFDHLGWTELIYNHISLRVPGEDGHFLINPFGLHYREVCASNLVKIDID
GNVIGHSDWPINPAGFTFHSAIHAALPDAHCVMHVHTTPTMAVCCSRDGLSFSNFYSAQLYGKIAYHDFEGITVHLEEGR
RIVESAGGRPVLLLRNHGPVTIGATLAQTFSLMWLLNRACEVQIATHAIGDALPIAPPVLEGCVRDSLNFDPKHGAGQDA
FDALQRIVDCIDPGYRA
>Mature_257_residues
MQRVPNQPFTRPARFSEAEWQARVQLAAAYRIFDHLGWTELIYNHISLRVPGEDGHFLINPFGLHYREVCASNLVKIDID
GNVIGHSDWPINPAGFTFHSAIHAALPDAHCVMHVHTTPTMAVCCSRDGLSFSNFYSAQLYGKIAYHDFEGITVHLEEGR
RIVESAGGRPVLLLRNHGPVTIGATLAQTFSLMWLLNRACEVQIATHAIGDALPIAPPVLEGCVRDSLNFDPKHGAGQDA
FDALQRIVDCIDPGYRA

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family [H]

Homologues:

Organism=Homo sapiens, GI29826323, Length=257, Percent_Identity=40.8560311284047, Blast_Score=171, Evalue=7e-43,
Organism=Homo sapiens, GI29826325, Length=257, Percent_Identity=40.8560311284047, Blast_Score=170, Evalue=1e-42,
Organism=Homo sapiens, GI29826319, Length=256, Percent_Identity=41.015625, Blast_Score=170, Evalue=1e-42,
Organism=Homo sapiens, GI29826321, Length=257, Percent_Identity=40.8560311284047, Blast_Score=169, Evalue=2e-42,
Organism=Homo sapiens, GI89276787, Length=260, Percent_Identity=35.3846153846154, Blast_Score=139, Evalue=2e-33,
Organism=Homo sapiens, GI297307160, Length=260, Percent_Identity=35.3846153846154, Blast_Score=139, Evalue=2e-33,
Organism=Homo sapiens, GI9257190, Length=260, Percent_Identity=35.3846153846154, Blast_Score=139, Evalue=3e-33,
Organism=Homo sapiens, GI297307158, Length=260, Percent_Identity=35.3846153846154, Blast_Score=139, Evalue=3e-33,
Organism=Homo sapiens, GI9257192, Length=260, Percent_Identity=35.3846153846154, Blast_Score=139, Evalue=3e-33,
Organism=Homo sapiens, GI9943848, Length=204, Percent_Identity=36.2745098039216, Blast_Score=134, Evalue=8e-32,
Organism=Homo sapiens, GI9951927, Length=204, Percent_Identity=36.2745098039216, Blast_Score=134, Evalue=9e-32,
Organism=Homo sapiens, GI62912453, Length=204, Percent_Identity=36.2745098039216, Blast_Score=134, Evalue=9e-32,
Organism=Caenorhabditis elegans, GI115533216, Length=194, Percent_Identity=39.1752577319588, Blast_Score=145, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI115533218, Length=194, Percent_Identity=39.1752577319588, Blast_Score=144, Evalue=4e-35,
Organism=Caenorhabditis elegans, GI71989555, Length=220, Percent_Identity=35, Blast_Score=120, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI71989550, Length=220, Percent_Identity=35, Blast_Score=120, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI71989544, Length=220, Percent_Identity=35, Blast_Score=120, Evalue=6e-28,
Organism=Caenorhabditis elegans, GI71989560, Length=220, Percent_Identity=35, Blast_Score=120, Evalue=6e-28,
Organism=Caenorhabditis elegans, GI71989541, Length=220, Percent_Identity=35, Blast_Score=120, Evalue=6e-28,
Organism=Drosophila melanogaster, GI281363755, Length=207, Percent_Identity=33.3333333333333, Blast_Score=119, Evalue=2e-27,
Organism=Drosophila melanogaster, GI281363751, Length=207, Percent_Identity=33.3333333333333, Blast_Score=119, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24655690, Length=207, Percent_Identity=33.3333333333333, Blast_Score=119, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24655685, Length=207, Percent_Identity=33.3333333333333, Blast_Score=119, Evalue=2e-27,
Organism=Drosophila melanogaster, GI281363761, Length=207, Percent_Identity=33.3333333333333, Blast_Score=118, Evalue=3e-27,
Organism=Drosophila melanogaster, GI281363759, Length=207, Percent_Identity=33.3333333333333, Blast_Score=118, Evalue=3e-27,
Organism=Drosophila melanogaster, GI281363753, Length=207, Percent_Identity=33.3333333333333, Blast_Score=118, Evalue=3e-27,
Organism=Drosophila melanogaster, GI281363763, Length=207, Percent_Identity=33.3333333333333, Blast_Score=118, Evalue=4e-27,
Organism=Drosophila melanogaster, GI281363757, Length=207, Percent_Identity=33.3333333333333, Blast_Score=118, Evalue=4e-27,
Organism=Drosophila melanogaster, GI17136738, Length=207, Percent_Identity=33.3333333333333, Blast_Score=118, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 28430; Mature: 28430

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRVPNQPFTRPARFSEAEWQARVQLAAAYRIFDHLGWTELIYNHISLRVPGEDGHFLIN
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEECCCCCCEEEC
PFGLHYREVCASNLVKIDIDGNVIGHSDWPINPAGFTFHSAIHAALPDAHCVMHVHTTPT
CCCHHHHHHHHCCCEEEEECCCEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCC
MAVCCSRDGLSFSNFYSAQLYGKIAYHDFEGITVHLEEGRRIVESAGGRPVLLLRNHGPV
EEEEECCCCCCHHHHHHHHEEEEEEEECCCCEEEEEHHCHHHHHHCCCCEEEEEECCCCE
TIGATLAQTFSLMWLLNRACEVQIATHAIGDALPIAPPVLEGCVRDSLNFDPKHGAGQDA
EEHHHHHHHHHHHHHHHHHHEEEEEHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHH
FDALQRIVDCIDPGYRA
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQRVPNQPFTRPARFSEAEWQARVQLAAAYRIFDHLGWTELIYNHISLRVPGEDGHFLIN
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEECCCCCCEEEC
PFGLHYREVCASNLVKIDIDGNVIGHSDWPINPAGFTFHSAIHAALPDAHCVMHVHTTPT
CCCHHHHHHHHCCCEEEEECCCEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCC
MAVCCSRDGLSFSNFYSAQLYGKIAYHDFEGITVHLEEGRRIVESAGGRPVLLLRNHGPV
EEEEECCCCCCHHHHHHHHEEEEEEEECCCCEEEEEHHCHHHHHHCCCCEEEEEECCCCE
TIGATLAQTFSLMWLLNRACEVQIATHAIGDALPIAPPVLEGCVRDSLNFDPKHGAGQDA
EEHHHHHHHHHHHHHHHHHHEEEEEHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHH
FDALQRIVDCIDPGYRA
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]